Cmc07g0200191.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0200191.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr07: 22852738 .. 22855526 (+)
Sequence length	2789
RNA-Seq Expression	Cmc07g0200191.1
Synteny	Cmc07g0200191.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGAAGCATTTTTGTTATAAATAAGAACCCAAGGTTTTTCAGACTTCAATATAGATAGACCTTAAAACCCTAGAGATGTCCTTCTCCATCTCCACACGCCACCACATCCGTCGACTATCTACGGCAGCCGCCGCCGCCGCCACCAATGCCACGGAGACGACGTCCTCTTCACTATCCATTTCAAAAGCGAAGTCTAAACTCAGAAACGAGTATGATCCAGATAAAGCCTTAGAAATTTACTCCTCTGTTTCTAGTCACTACACCTCCCCTGTCACTTCTCGTTACGCTCAAGAAATAACCATCCGCCGTCTCGCTAAGTCCCGTCGATTCAAGGACATCGAATCCCTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAACCTTTTCTGTCCACCCTGATTCGATCCTACGGTCGAGTTGGTATGTTCGAGCACGCCATGAGGACTTATAATCAGATGGGTGATTTAGGTACTCCTCGATCCGCACTTTCATTTAATGCCCTGTTATCTGCTTGTAACCATTCGAAGCAATTCGACAAGGTTCCTCAACTGTTTGACGAAATGCCCAAGAGATATAATTTCTCTCCCAATAAGATCTCGTACGGTATCCTGGTTAAATCCTATTGCGACGCGGGTTCTCCTGAGAAAGCCTTACAGATTTTACGAGAAATGGAGGAAAATGACGTGGAGGTAACTGCTGTGACATTCACAACCATTATAAATGCTCTGTACAAGAAGGGTGAGAGCGCAGAGGCAGAGAAAATATGGGACAAGATGATATCAAAAGGGTGTGAACTTGATGTTGGAGCCTATAATGTTAGGTTGATGCACGAACATGGTGGCAAGCCAGAGCGTGTACAAGCCATAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGATGCAATTAGTTATAATTACTTAATGACTTGTTATTGTAAGAATGGGATGATTGATGAAGCAAAGAAGGTGTATAACGATATGGAGATAAATGGATGTAATAAGAATGCTGCAACCTTTAGGACCTTTATTTATCATCTTTGTAGAAATGGGGAGTATGAGAAAGGGTACAAGGTTTTTAAGGAGAGTGTGAAGATGAATAAGATTCCTGATTTTAACACGCTGAAGTATTTGGTGGAGGGGCTGGTGGAGAAGAAGATGATGAGAGAAGCCAAGGGTTTAATCCGGACTGTAAGAAAGAAATTCCCTCCTGATACTTTGAAGGCTTGGAGAGAAGTTGAGGAGGGGGTTGGTTTGGCTTCTGCTGGTGATGATGTTTCTTCTAAGGATGATAACGTTTCTTCTAAGGATGATGATGAAACTAAAACATGAGTGTTAAATTCAACTTTGTTGTTGTTGATGCTTTCTTCTCTGTATCTGTATTCATTGCTTTTTTATCTTTTGGTCCCCAATTGAATAAGTTCTGTTTTGGAAGCTATAGATGGCGAACAATTGTTGTTATGCATCGGCAATGGAAGTCTAAATTATAAGCAGTCATATGGGACTTGGGTAACTATAAAGTTTGAAAAGCACCATATTTATTCTTAATAGATCTTGAGCCTTTCTTCTTTCAATATCTCTCTAAATTTGCTTTAGCTACACTACAATAAGGTTCATTAAATTAATGAGTGAACTCTTAAAAAAATCTTGGCTGTAGATTTTGGAGGGGAATGTGCTACAAAAGTTGTCTTTGTAGATTTAACTATTTGATTTTGAGTAAGATTTCAAAAGTATCTGATTTTATATGTAACCACGTTTTCTGATTTTCAATATCCAAACTCTGCCCTTATATTTGTCAAAAAGATACTTTATGCAACATTCAAATATATTCGACTAAAAATACCAAGTAGACTCGATGAACTGATGTTTAGAGATGGATGGCTGTATTGAGGAAAGACGCAGCATATCAATCATGTTTTCAAGGTACAGAAAATAAAATGAAATAGAGTTAACTGATGTTTAGAGAAACCTTCAAGCCTTCTTTTTGGTGGCAATTGATGGTCCAGCACCGTGGCCGGTGGTCGTAGCCTTTCTGCAATGTGGTAGCAACCCACGAAGCATGGCGAAAACTCCCAACACCAAAAAAGGGGAATATATGGTCAACAGTATACCAGATGCTCTCTGTGAACCAATCAATTCAGCAGCTATAGCAGCCTGAGAAAAAAAAAAGTGTAAAGCTTGCTTCCATCTTCAAGAATTAGAATCAGAGAACAAGGATAAAGAAAAGTAAAGTACCATAGCAGAGAAGAGGGAGACGCCATAGATCAAACAGGTGGTGTGCAGCCATGACTTCGCAGTGGAGATGGCGTAGAGGTTGAGAAGCGTGAGTGGCCATTGAAGAAGAAGCTCGAGCCAAAGCAAGCCGATGAAAAAGGGAGGCGGCTCGGCCATCAGATAATCGCCGGAGTGGGTAATGTATTGGTTTTTGAAATGAATGAGAATGTCGGGGAAAAGGGTTTGAGGGAGTAATAACTGGGCGCCGATGAGAGGAGGTGCCAAGGCATGTACAAGGAAAAACACAAATAGAACTGAGTTGAAGAGCTTGAGAGCAGATCCCATTGTTCCACTTTGCACAACTTCTCTTGCCGGAAGACACTACGGGAGATTGATTCTGAGATGTTGACTTCTAAATTCTGCTTTTGCTAAATAATATCACATTCAGAGATTCACTTAGCTACTTCCAAGCGTTGAAATTTAGTCTTTTACTTTTAACAAACAATAACATTAGAGGTCAATTTTTAACGAATTTGGTCAAATAATAATAATAGTTTTCATTCCAGGA

mRNA sequence

CCTGAAGCATTTTTGTTATAAATAAGAACCCAAGGTTTTTCAGACTTCAATATAGATAGACCTTAAAACCCTAGAGATGTCCTTCTCCATCTCCACACGCCACCACATCCGTCGACTATCTACGGCAGCCGCCGCCGCCGCCACCAATGCCACGGAGACGACGTCCTCTTCACTATCCATTTCAAAAGCGAAGTCTAAACTCAGAAACGAGTATGATCCAGATAAAGCCTTAGAAATTTACTCCTCTGTTTCTAGTCACTACACCTCCCCTGTCACTTCTCGTTACGCTCAAGAAATAACCATCCGCCGTCTCGCTAAGTCCCGTCGATTCAAGGACATCGAATCCCTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAACCTTTTCTGTCCACCCTGATTCGATCCTACGGTCGAGTTGGTATGTTCGAGCACGCCATGAGGACTTATAATCAGATGGGTGATTTAGGTACTCCTCGATCCGCACTTTCATTTAATGCCCTGTTATCTGCTTGTAACCATTCGAAGCAATTCGACAAGGTTCCTCAACTGTTTGACGAAATGCCCAAGAGATATAATTTCTCTCCCAATAAGATCTCGTACGGTATCCTGGTTAAATCCTATTGCGACGCGGGTTCTCCTGAGAAAGCCTTACAGATTTTACGAGAAATGGAGGAAAATGACGTGGAGGTAACTGCTGTGACATTCACAACCATTATAAATGCTCTGTACAAGAAGGGTGAGAGCGCAGAGGCAGAGAAAATATGGGACAAGATGATATCAAAAGGGTGTGAACTTGATGTTGGAGCCTATAATGTTAGGTTGATGCACGAACATGGTGGCAAGCCAGAGCGTGTACAAGCCATAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGATGCAATTAGTTATAATTACTTAATGACTTGTTATTGTAAGAATGGGATGATTGATGAAGCAAAGAAGGTGTATAACGATATGGAGATAAATGGATGTAATAAGAATGCTGCAACCTTTAGGACCTTTATTTATCATCTTTGTAGAAATGGGGAGTATGAGAAAGGGTACAAGGTTTTTAAGGAGAGTGTGAAGATGAATAAGATTCCTGATTTTAACACGCTGAAGTATTTGGTGGAGGGGCTGGTGGAGAAGAAGATGATGAGAGAAGCCAAGGGTTTAATCCGGACTGTAAGAAAGAAATTCCCTCCTGATACTTTGAAGGCTTGGAGAGAAGTTGAGGAGGGGGTTGGTTTGGCTTCTGCTGGTGATGATGTTTCTTCTAAGGATGATAACGTTTCTTCTAAGGATGATGATGAAACTAAAACATGAGTGTTAAATTCAACTTTGTTGTTGTTGATGCTTTCTTCTCTGTATCTGTATTCATTGCTTTTTTATCTTTTGGTCCCCAATTGAATAAGTTCTGTTTTGGAAGCTATAGATGGCGAACAATTGTTGTTATGCATCGGCAATGGAAGTCTAAATTATAAGCAGTCATATGGGACTTGGGTAACTATAAAGTTTGAAAAGCACCATATTTATTCTTAATAGATCTTGAGCCTTTCTTCTTTCAATATCTCTCTAAATTTGCTTTAGCTACACTACAATAAGGTTCATTAAATTAATGAGTGAACTCTTAAAAAAATCTTGGCTGTAGATTTTGGAGGGGAATGTGCTACAAAAGTTGTCTTTGTAGATTTAACTATTTGATTTTGAGTAAGATTTCAAAAGTATCTGATTTTATATGTAACCACGTTTTCTGATTTTCAATATCCAAACTCTGCCCTTATATTTGTCAAAAAGATACTTTATGCAACATTCAAATATATTCGACTAAAAATACCAAGTAGACTCGATGAACTGATGTTTAGAGATGGATGGCTGTATTGAGGAAAGACGCAGCATATCAATCATGTTTTCAAGGTACAGAAAATAAAATGAAATAGAGTTAACTGATGTTTAGAGAAACCTTCAAGCCTTCTTTTTGGTGGCAATTGATGGTCCAGCACCGTGGCCGGTGGTCGTAGCCTTTCTGCAATGTGGTAGCAACCCACGAAGCATGGCGAAAACTCCCAACACCAAAAAAGGGGAATATATGGTCAACAGTATACCAGATGCTCTCTGTGAACCAATCAATTCAGCAGCTATAGCAGCCTGAGAAAAAAAAAAGTGTAAAGCTTGCTTCCATCTTCAAGAATTAGAATCAGAGAACAAGGATAAAGAAAAGTAAAGTACCATAGCAGAGAAGAGGGAGACGCCATAGATCAAACAGGTGGTGTGCAGCCATGACTTCGCAGTGGAGATGGCGTAGAGGTTGAGAAGCGTGAGTGGCCATTGAAGAAGAAGCTCGAGCCAAAGCAAGCCGATGAAAAAGGGAGGCGGCTCGGCCATCAGATAATCGCCGGAGTGGGTAATGTATTGGTTTTTGAAATGAATGAGAATGTCGGGGAAAAGGGTTTGAGGGAGTAATAACTGGGCGCCGATGAGAGGAGGTGCCAAGGCATGTACAAGGAAAAACACAAATAGAACTGAGTTGAAGAGCTTGAGAGCAGATCCCATTGTTCCACTTTGCACAACTTCTCTTGCCGGAAGACACTACGGGAGATTGATTCTGAGATGTTGACTTCTAAATTCTGCTTTTGCTAAATAATATCACATTCAGAGATTCACTTAGCTACTTCCAAGCGTTGAAATTTAGTCTTTTACTTTTAACAAACAATAACATTAGAGGTCAATTTTTAACGAATTTGGTCAAATAATAATAATAGTTTTCATTCCAGGA

Coding sequence (CDS)

ATGTCCTTCTCCATCTCCACACGCCACCACATCCGTCGACTATCTACGGCAGCCGCCGCCGCCGCCACCAATGCCACGGAGACGACGTCCTCTTCACTATCCATTTCAAAAGCGAAGTCTAAACTCAGAAACGAGTATGATCCAGATAAAGCCTTAGAAATTTACTCCTCTGTTTCTAGTCACTACACCTCCCCTGTCACTTCTCGTTACGCTCAAGAAATAACCATCCGCCGTCTCGCTAAGTCCCGTCGATTCAAGGACATCGAATCCCTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAACCTTTTCTGTCCACCCTGATTCGATCCTACGGTCGAGTTGGTATGTTCGAGCACGCCATGAGGACTTATAATCAGATGGGTGATTTAGGTACTCCTCGATCCGCACTTTCATTTAATGCCCTGTTATCTGCTTGTAACCATTCGAAGCAATTCGACAAGGTTCCTCAACTGTTTGACGAAATGCCCAAGAGATATAATTTCTCTCCCAATAAGATCTCGTACGGTATCCTGGTTAAATCCTATTGCGACGCGGGTTCTCCTGAGAAAGCCTTACAGATTTTACGAGAAATGGAGGAAAATGACGTGGAGGTAACTGCTGTGACATTCACAACCATTATAAATGCTCTGTACAAGAAGGGTGAGAGCGCAGAGGCAGAGAAAATATGGGACAAGATGATATCAAAAGGGTGTGAACTTGATGTTGGAGCCTATAATGTTAGGTTGATGCACGAACATGGTGGCAAGCCAGAGCGTGTACAAGCCATAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGATGCAATTAGTTATAATTACTTAATGACTTGTTATTGTAAGAATGGGATGATTGATGAAGCAAAGAAGGTGTATAACGATATGGAGATAAATGGATGTAATAAGAATGCTGCAACCTTTAGGACCTTTATTTATCATCTTTGTAGAAATGGGGAGTATGAGAAAGGGTACAAGGTTTTTAAGGAGAGTGTGAAGATGAATAAGATTCCTGATTTTAACACGCTGAAGTATTTGGTGGAGGGGCTGGTGGAGAAGAAGATGATGAGAGAAGCCAAGGGTTTAATCCGGACTGTAAGAAAGAAATTCCCTCCTGATACTTTGAAGGCTTGGAGAGAAGTTGAGGAGGGGGTTGGTTTGGCTTCTGCTGGTGATGATGTTTCTTCTAAGGATGATAACGTTTCTTCTAAGGATGATGATGAAACTAAAACATGA

Protein sequence

MSFSISTRHHIRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDETKT

Homology

[Close]

BLAST of Cmc07g0200191.1 vs. NCBI nr
Match: XP_008453729.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Cucumis melo] >KAA0044756.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK16706.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 819.3 bits (2115), Expect = 1.5e-233
Identity = 419/423 (99.05%), Postives = 420/423 (99.29%), Query Frame = 0


Query: 1   MSFSISTRHHIRRLS---TAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60
           MSFSISTRHHIRRLS   TAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS
Sbjct: 1   MSFSISTRHHIRRLSTAATAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60

Query: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120
           VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV
Sbjct: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180
           GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS
Sbjct: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180

Query: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMI 240
           YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKM+
Sbjct: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMM 240

Query: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300
           SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE
Sbjct: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300

Query: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360
           AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE
Sbjct: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360

Query: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE 420
           GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE
Sbjct: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE 420

[Close]

BLAST of Cmc07g0200191.1 vs. NCBI nr
Match: XP_031740385.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Cucumis sativus] >KAE8649174.1 hypothetical protein Csa_014874 [Cucumis sativus])

HSP 1 Score: 767.3 bits (1980), Expect = 6.8e-218
Identity = 390/421 (92.64%), Postives = 404/421 (95.96%), Query Frame = 0


Query: 1   MSFSISTRHHIRRLSTAAAAAATNATETT-SSSLSISKAKSKLRNEYDPDKALEIYSSVS 60
           MSFSISTRHHIRRLSTAAAAAATNAT TT SSSLSIS+AKSKLR EYDPDKA+EIYSSVS
Sbjct: 1   MSFSISTRHHIRRLSTAAAAAATNATATTSSSSLSISRAKSKLRTEYDPDKAVEIYSSVS 60

Query: 61  SHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGM 120
           SHYTSPVTSRYAQEITIRRLAK+RRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGM
Sbjct: 61  SHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGM 120

Query: 121 FEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYG 180
           FEHAMRTYNQMGDLGTPRSALSFNALL+ACN+SKQFDKVPQLFDEMPKRYNFSPNK SYG
Sbjct: 121 FEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLFDEMPKRYNFSPNKFSYG 180

Query: 181 ILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISK 240
           ILVKSYCDAGSPEKA++I+REMEEN VEV AVTFTTI+NALYKKG+SAEAEKIW+ MISK
Sbjct: 181 ILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDSAEAEKIWETMISK 240

Query: 241 GCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAK 300
           GCELDVGAYNVRLMHEHGGKPE VQA+IEEMANSGLKPDAISYNYLMTCYCKNGM DEAK
Sbjct: 241 GCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLMTCYCKNGMFDEAK 300

Query: 301 KVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGL 360
           KVYNDMEINGCNKNAATFRT IYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGL
Sbjct: 301 KVYNDMEINGCNKNAATFRTLIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGL 360

Query: 361 VEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDETK 420
           VEKKMMREAKGLIRT+RKKFPPDTLKAWREVEEGVGLASAGDD       VSSKDDDET+
Sbjct: 361 VEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDD-------VSSKDDDETR 414

[Close]

BLAST of Cmc07g0200191.1 vs. NCBI nr
Match: XP_038876778.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 713.4 bits (1840), Expect = 1.2e-201
Identity = 359/412 (87.14%), Postives = 386/412 (93.69%), Query Frame = 0


Query: 1   MSFSISTRHHIRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSS 60
           MSFSISTR HIR LSTAAA     AT TTSSSL+IS+AK KLR EYDPDKALEIYSSVSS
Sbjct: 1   MSFSISTR-HIRHLSTAAA-----ATTTTSSSLTISQAKYKLRTEYDPDKALEIYSSVSS 60

Query: 61  HYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMF 120
           HYTSPV+SRYAQE+TIRRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYGR GMF
Sbjct: 61  HYTSPVSSRYAQELTIRRLAKSRRFGDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMF 120

Query: 121 EHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGI 180
           EHAMRTYNQMGDLGTPRSA+SFNALLSACNHSKQFDKVPQLFDE+PKRYNFSPNKISYGI
Sbjct: 121 EHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGI 180

Query: 181 LVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKG 240
           LVKS+CDAGSPEKA+QI+++MEEN VEVTAVTFTTI+ ALYKKGES EAEKIW+KMISKG
Sbjct: 181 LVKSHCDAGSPEKAVQIVKQMEENGVEVTAVTFTTILGALYKKGESKEAEKIWNKMISKG 240

Query: 241 CELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKK 300
           CELDVGAYNVRLMHEHGGKPE VQA+IEEMANSGLKPD ISYNYLMTCYCKNGMIDEA K
Sbjct: 241 CELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNGMIDEAMK 300

Query: 301 VYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLV 360
           VY+DME+NGCNKNAATFRTFIY+LCRNGEYEKGYK+FKESVKM+KIPDFNT+KYLVEGLV
Sbjct: 301 VYDDMEVNGCNKNAATFRTFIYYLCRNGEYEKGYKIFKESVKMHKIPDFNTVKYLVEGLV 360

Query: 361 EKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSS 413
           EKK M+EAKGLIRT+RKKFPPDTLKAWR+VEE +GLASA  + SSK+D   +
Sbjct: 361 EKKKMKEAKGLIRTIRKKFPPDTLKAWRKVEESLGLASAAANASSKNDEAGT 406

[Close]

BLAST of Cmc07g0200191.1 vs. NCBI nr
Match: XP_023553152.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 691.0 bits (1782), Expect = 6.2e-195
Identity = 352/421 (83.61%), Postives = 385/421 (91.45%), Query Frame = 0


Query: 4   SISTRHHIRRLSTAAAAAAT-----NATETTSSSLSISKAKSKLRNEYDPDKALEIYSSV 63
           SI+TR HIRRLSTAA A AT      AT TTSSS+SISKAKSKLR EYDPDKAL IYSSV
Sbjct: 3   SIATR-HIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 62

Query: 64  SSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVG 123
           SSHYTSPV+SRYAQE+TIRRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYGR G
Sbjct: 63  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAG 122

Query: 124 MFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISY 183
           MFEHAMRTYNQM D GTPRS +SFNALL A NHSKQFDKVPQLFDE+PK+Y+FSPNKISY
Sbjct: 123 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYSFSPNKISY 182

Query: 184 GILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMIS 243
           GILVKSYC++GSPEKA+QI+REMEENDVEVTAVTFTTI++ALYKKGES EAEKIW+KMIS
Sbjct: 183 GILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMIS 242

Query: 244 KGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEA 303
           KGCELDVGAYNVRLMHEHGGKPE V+A+IEEMANSG+KPD ISYNYLMTCYCKNGMIDEA
Sbjct: 243 KGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEA 302

Query: 304 KKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEG 363
           KKVY+DMEINGCNKNAATFRTF+Y+LCRNG+YEKGY VFKESVK++KIPD NT+KYLVEG
Sbjct: 303 KKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEG 362

Query: 364 LVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDET 420
           L+EKK M+EAKGLIRT+RKKFPPD+LKAWR+VEE +GLAS     SS   + SSK DDET
Sbjct: 363 LMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLAS-----SSSSSSSSSKADDET 417

[Close]

BLAST of Cmc07g0200191.1 vs. NCBI nr
Match: XP_022985077.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 688.7 bits (1776), Expect = 3.1e-194
Identity = 352/423 (83.22%), Postives = 383/423 (90.54%), Query Frame = 0


Query: 4   SISTRHHIRRLSTAA-------AAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYS 63
           SI+TR HIRRLSTAA       A AA  AT TTSSS+SISKAKSKLR EYDPDKAL IYS
Sbjct: 3   SIATR-HIRRLSTAATTTATATATAAVKATATTSSSISISKAKSKLRTEYDPDKALNIYS 62

Query: 64  SVSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGR 123
           SVSSHYTSPV+SRYAQEITIRRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYGR
Sbjct: 63  SVSSHYTSPVSSRYAQEITIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGR 122

Query: 124 VGMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKI 183
            GMFEHAMRTYNQM D GTPRSA+SFNALL A NHSKQFDKVPQLFDE+PK+YNFSPNKI
Sbjct: 123 AGMFEHAMRTYNQMEDFGTPRSAISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKI 182

Query: 184 SYGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKM 243
           SYGILVKSYC++GSPEKA+QI+REMEENDVEVTAVTFTTI++ALYKKGES EAEKIW+KM
Sbjct: 183 SYGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKM 242

Query: 244 ISKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMID 303
           ISKGCELDVGAYNVRLMHEHG KPE V+A+IEEMANSG+KPD ISYNYLMTCYCKNGMID
Sbjct: 243 ISKGCELDVGAYNVRLMHEHGSKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMID 302

Query: 304 EAKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLV 363
           EAKKVY+DMEINGCNKNAATFRTF+Y+LCRNG+YEKGY VFKESVK++KIPD NT+KYLV
Sbjct: 303 EAKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLV 362

Query: 364 EGLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDD 420
           EGL+EKK M+EAKGLIRT+RKKFPPD+LKAWR+VEE +GLAS+           SSK DD
Sbjct: 363 EGLMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASSSSS--------SSKADD 416

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy Swiss-Prot
Match: Q9M065 (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 3.0e-144
Identity = 253/392 (64.54%), Postives = 314/392 (80.10%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRY 70
           +RR ++AAA   T  T  +S  +S+SKAKS LR E+DPDKAL+IY++VS H  SPV+SRY
Sbjct: 11  VRRFASAAADGTT--TAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRY 70

Query: 71  AQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQM 130
           AQE+T+RRLAK RRF DIE+LIESHKNDPKI +EPF STLIRSYG+  MF HAMRT+ QM
Sbjct: 71  AQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQM 130

Query: 131 GDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYN-FSPNKISYGILVKSYCDAG 190
              GTPRSA+SFNALL+AC HSK FDKVPQLFDE+P+RYN   P+KISYGIL+KSYCD+G
Sbjct: 131 DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSG 190

Query: 191 SPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYN 250
           +PEKA++I+R+M+   +EVT + FTTI+++LYKKGE   A+ +W++M+ KGCELD  AYN
Sbjct: 191 TPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN 250

Query: 251 VRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEING 310
           VR+M      PERV+ +IEEM++ GLKPD ISYNYLMT YC+ GM+DEAKKVY  +E N 
Sbjct: 251 VRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 310

Query: 311 CNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAK 370
           C  NAATFRT I+HLC +  YE+GY +FK+SV M+KIPDFNTLK+LV GLVE K   +AK
Sbjct: 311 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAK 370

Query: 371 GLIRTVRKKFPPDTLKAWREVEEGVGLASAGD 402
           GLIRTV+KKFPP  L AW+++EE +GL S  D
Sbjct: 371 GLIRTVKKKFPPSFLNAWKKLEEELGLYSKTD 400

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy Swiss-Prot
Match: Q9ZU67 (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g18520 PE=1 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 8.3e-126
Identity = 226/392 (57.65%), Postives = 296/392 (75.51%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRY 70
           +RR ST  A    + T     ++++SKAKSKLR   DPDKAL IY SVS++ TSP++SRY
Sbjct: 11  LRRFST--ATGIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRY 70

Query: 71  AQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQM 130
           A E+T++RLAKS+RF DIE+LIESHKN+PKI  E FLSTLIRSYGR  MF+HAM+ + +M
Sbjct: 71  AMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEM 130

Query: 131 GDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRY-NFSPNKISYGILVKSYCDAG 190
             LGTPR+ +SFNALL+AC HS  F++VPQLFDE P+RY N +P+KISYG+L+KSYCD+G
Sbjct: 131 DKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSG 190

Query: 191 SPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYN 250
            PEKA++I+R+ME   VEVT + FTTI+ +LYK G   EAE +W +M++KGC+LD   YN
Sbjct: 191 KPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN 250

Query: 251 VRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEING 310
           VRLM+     PERV+ ++EEM++ GLKPD +SYNYLMT YC  GM+ EAKKVY  +E   
Sbjct: 251 VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE--- 310

Query: 311 CNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAK 370
              NAATFRT I+HLC NG Y++G  VFK+S  ++KIPDF T K+L EGLV+   M +A+
Sbjct: 311 -QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDAR 370

Query: 371 GLIRTVRKKFPPDTLKAWREVEEGVGLASAGD 402
           G+ R V+KKFPP  +  W+++EE +GL S G+
Sbjct: 371 GVARIVKKKFPPRLVTEWKKLEEKLGLYSKGN 396

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy Swiss-Prot
Match: Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-50
Identity = 114/383 (29.77%), Postives = 208/383 (54.31%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRY 70
           IR LS+A+   + ++    +S      A S L++E DPD+ LEI  + S      +  R 
Sbjct: 23  IRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRI-DRI 82

Query: 71  AQEITIRRLAKSRRFKDIESLIESH-KNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQ 130
           A    +  LA+ + F  + +L++   +N P +  E F +  I  Y +  M +H++R +  
Sbjct: 83  AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 142

Query: 131 MGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGILVKSYCDAG 190
           +      R+  S NALL AC  +K + +  +++ EMPK Y   P+  +Y  ++K +C++G
Sbjct: 143 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESG 202

Query: 191 SPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYN 250
           S   +  I+ EME   ++  + +F  +I+  Y + +S E  K+   M  +G  + V  YN
Sbjct: 203 SASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYN 262

Query: 251 VRLMHE-HGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEIN 310
           +R+       K +  +A+++ M ++G+KP+ ++Y++L+  +C     +EAKK++  M   
Sbjct: 263 IRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNR 322

Query: 311 GCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREA 370
           GC  ++  + T IY+LC+ G++E    + KES++ N +P F+ +K LV GL +   + EA
Sbjct: 323 GCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 382

Query: 371 KGLIRTVRKKFPPDTLKAWREVE 392
           K LI  V++KF  + ++ W EVE
Sbjct: 383 KELIGQVKEKFTRN-VELWNEVE 403

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy Swiss-Prot
Match: Q9LK57 (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.2e-49
Identity = 115/377 (30.50%), Postives = 208/377 (55.17%), Query Frame = 0


Query: 2   SFSISTRHHIRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIY-SSVSS 61
           +FS ST H  RR  +A  AAA   +    S +++      + +E DP    E +  +  +
Sbjct: 12  NFSFST-HTNRRFFSAVTAAAATPSPPKPSLITL------VNDERDPKFITEKFKKACQA 71

Query: 62  HYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMF 121
            +     + Y  E T+RRLA +++F+ +E ++E     P +++E F++ +I  YGRVGMF
Sbjct: 72  EWFRKNIAVY--ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMF 131

Query: 122 EHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGI 181
           E+A + +++M +    R+ALSFNALL+AC +SK+FD V  +F E+P + +  P+  SY  
Sbjct: 132 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 191

Query: 182 LVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKG 241
           L+K  C  GS  +A+ ++ E+E   ++   +TF  +++  Y KG+  E E+IW +M+ K 
Sbjct: 192 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 251

Query: 242 CELDVGAYNVRLMH-EHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAK 301
            + D+ +YN RL+      K E + ++ +++  + LKPD  ++  ++  +   G +DEA 
Sbjct: 252 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 311

Query: 302 KVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGL 361
             Y ++E NGC      F + +  +C+ G+ E  Y++ KE      + D   L+ +V+ L
Sbjct: 312 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 371

Query: 362 VEKKMMREAKGLIRTVR 377
           V+     EA+ ++   +
Sbjct: 372 VKGSKQDEAEEIVELAK 379

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy Swiss-Prot
Match: Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.3e-49
Identity = 114/369 (30.89%), Postives = 200/369 (54.20%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSV--SSHYTSPVTS 70
           IRR S+AA   +     T + S       S +  E +P + +E +     S  + + +  
Sbjct: 17  IRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIA- 76

Query: 71  RYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYN 130
               + T+RRL  ++R   +E ++E  K    +++E F + +I  YG+ GMFE+A + + 
Sbjct: 77  --VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFE 136

Query: 131 QMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGILVKSYCDA 190
           +M +    RS LSFNALLSA   SK+FD V +LF+E+P + +  P+ +SY  L+K+ C+ 
Sbjct: 137 EMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEK 196

Query: 191 GSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAY 250
            S  +A+ +L E+E   ++   VTF T++ + Y KG+    E+IW KM+ K   +D+  Y
Sbjct: 197 DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTY 256

Query: 251 NVRLMH-EHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEI 310
           N RL+   +  K + +  +  E+  SGLKPD  S+N ++      G +DEA+  Y ++  
Sbjct: 257 NARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVK 316

Query: 311 NGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMRE 370
           +G   + ATF   +  +C+ G++E   ++FKE+     +    TL+ LV+ LV+     E
Sbjct: 317 HGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREE 376

Query: 371 AKGLIRTVR 377
           A+ +++  +
Sbjct: 377 AEEIVKIAK 382

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy TrEMBL
Match: A0A5D3D1X8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005400 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 7.3e-234
Identity = 419/423 (99.05%), Postives = 420/423 (99.29%), Query Frame = 0


Query: 1   MSFSISTRHHIRRLS---TAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60
           MSFSISTRHHIRRLS   TAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS
Sbjct: 1   MSFSISTRHHIRRLSTAATAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60

Query: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120
           VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV
Sbjct: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180
           GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS
Sbjct: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180

Query: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMI 240
           YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKM+
Sbjct: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMM 240

Query: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300
           SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE
Sbjct: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300

Query: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360
           AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE
Sbjct: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360

Query: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE 420
           GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE
Sbjct: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE 420

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy TrEMBL
Match: A0A1S3BX19 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494372 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 7.3e-234
Identity = 419/423 (99.05%), Postives = 420/423 (99.29%), Query Frame = 0


Query: 1   MSFSISTRHHIRRLS---TAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60
           MSFSISTRHHIRRLS   TAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS
Sbjct: 1   MSFSISTRHHIRRLSTAATAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60

Query: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120
           VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV
Sbjct: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180
           GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS
Sbjct: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180

Query: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMI 240
           YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKM+
Sbjct: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMM 240

Query: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300
           SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE
Sbjct: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300

Query: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360
           AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE
Sbjct: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360

Query: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE 420
           GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE
Sbjct: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDE 420

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy TrEMBL
Match: A0A0A0KXX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038790 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 5.1e-203
Identity = 359/394 (91.12%), Postives = 375/394 (95.18%), Query Frame = 0


Query: 27  ETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRYAQEITIRRLAKSRRFK 86
           ET S+S+S   +KSKLR EYDPDKA+EIYSSVSSHYTSPVTSRYAQEITIRRLAK+RRFK
Sbjct: 62  ETPSTSVS---SKSKLRTEYDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFK 121

Query: 87  DIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALL 146
           DIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALL
Sbjct: 122 DIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALL 181

Query: 147 SACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGILVKSYCDAGSPEKALQILREMEENDV 206
           +ACN+SKQFDKVPQLFDEMPKRYNFSPNK SYGILVKSYCDAGSPEKA++I+REMEEN V
Sbjct: 182 TACNNSKQFDKVPQLFDEMPKRYNFSPNKFSYGILVKSYCDAGSPEKAMEIVREMEENGV 241

Query: 207 EVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYNVRLMHEHGGKPERVQAI 266
           EV AVTFTTI+NALYKKG+SAEAEKIW+ MISKGCELDVGAYNVRLMHEHGGKPE VQA+
Sbjct: 242 EVNAVTFTTILNALYKKGDSAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQAL 301

Query: 267 IEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEINGCNKNAATFRTFIYHLCR 326
           IEEMANSGLKPDAISYNYLMTCYCKNGM DEAKKVYNDMEINGCNKNAATFRT IYHLCR
Sbjct: 302 IEEMANSGLKPDAISYNYLMTCYCKNGMFDEAKKVYNDMEINGCNKNAATFRTLIYHLCR 361

Query: 327 NGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRTVRKKFPPDTLKA 386
           NGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRT+RKKFPPDTLKA
Sbjct: 362 NGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKA 421

Query: 387 WREVEEGVGLASAGDDVSSKDDNVSSKDDDETKT 421
           WREVEEGVGLASAGDD       VSSKDDDET+T
Sbjct: 422 WREVEEGVGLASAGDD-------VSSKDDDETRT 445

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy TrEMBL
Match: A0A6J1J3W0 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111483156 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.5e-194
Identity = 352/423 (83.22%), Postives = 383/423 (90.54%), Query Frame = 0


Query: 4   SISTRHHIRRLSTAA-------AAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYS 63
           SI+TR HIRRLSTAA       A AA  AT TTSSS+SISKAKSKLR EYDPDKAL IYS
Sbjct: 3   SIATR-HIRRLSTAATTTATATATAAVKATATTSSSISISKAKSKLRTEYDPDKALNIYS 62

Query: 64  SVSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGR 123
           SVSSHYTSPV+SRYAQEITIRRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYGR
Sbjct: 63  SVSSHYTSPVSSRYAQEITIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGR 122

Query: 124 VGMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKI 183
            GMFEHAMRTYNQM D GTPRSA+SFNALL A NHSKQFDKVPQLFDE+PK+YNFSPNKI
Sbjct: 123 AGMFEHAMRTYNQMEDFGTPRSAISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKI 182

Query: 184 SYGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKM 243
           SYGILVKSYC++GSPEKA+QI+REMEENDVEVTAVTFTTI++ALYKKGES EAEKIW+KM
Sbjct: 183 SYGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKM 242

Query: 244 ISKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMID 303
           ISKGCELDVGAYNVRLMHEHG KPE V+A+IEEMANSG+KPD ISYNYLMTCYCKNGMID
Sbjct: 243 ISKGCELDVGAYNVRLMHEHGSKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMID 302

Query: 304 EAKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLV 363
           EAKKVY+DMEINGCNKNAATFRTF+Y+LCRNG+YEKGY VFKESVK++KIPD NT+KYLV
Sbjct: 303 EAKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLV 362

Query: 364 EGLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDD 420
           EGL+EKK M+EAKGLIRT+RKKFPPD+LKAWR+VEE +GLAS+           SSK DD
Sbjct: 363 EGLMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASSSSS--------SSKADD 416

[Close]

BLAST of Cmc07g0200191.1 vs. ExPASy TrEMBL
Match: A0A6J1ETZ0 (scarecrow-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111435912 PE=3 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 9.7e-194
Identity = 344/407 (84.52%), Postives = 376/407 (92.38%), Query Frame = 0


Query: 4   SISTRHHIRRLSTAAAAAAT-----NATETTSSSLSISKAKSKLRNEYDPDKALEIYSSV 63
           SI+TR HIRRLSTAA A AT      AT TTSSS+SISKAKSKLR EYDPDKAL IYSSV
Sbjct: 13  SIATR-HIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 72

Query: 64  SSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVG 123
           SSHYTSPV+SRYAQE+TIRRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYG+ G
Sbjct: 73  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 132

Query: 124 MFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISY 183
           MFEHAMRTYNQM D GTPRS +SFNALL A NHSKQFDKVPQLFDE+PK+YNFSPNKISY
Sbjct: 133 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISY 192

Query: 184 GILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMIS 243
           GILVKSYC++GSPEKA+QI+REMEENDVEVTAVTFTTI++ALYKKGES EAEKIW+KMIS
Sbjct: 193 GILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMIS 252

Query: 244 KGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEA 303
           KGCELDVGAYNVRLMHEHGGKPE V+A+IEEMANSG+KPD ISYNYLMTCYCKNGMIDEA
Sbjct: 253 KGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEA 312

Query: 304 KKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEG 363
           KKVY+DMEINGCNKNAATFRTF+Y+LCRNG+YEKGY VFKESVK++KIPD NT+KYLVEG
Sbjct: 313 KKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEG 372

Query: 364 LVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSS 406
           L+EKK M+EAKGLIRT+RKKFPPD+LK WR+VEE +GLAS+    SS
Sbjct: 373 LMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSASSSS 418

[Close]

BLAST of Cmc07g0200191.1 vs. TAIR 10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 513.1 bits (1320), Expect = 2.2e-145
Identity = 253/392 (64.54%), Postives = 314/392 (80.10%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRY 70
           +RR ++AAA   T  T  +S  +S+SKAKS LR E+DPDKAL+IY++VS H  SPV+SRY
Sbjct: 11  VRRFASAAADGTT--TAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRY 70

Query: 71  AQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQM 130
           AQE+T+RRLAK RRF DIE+LIESHKNDPKI +EPF STLIRSYG+  MF HAMRT+ QM
Sbjct: 71  AQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQM 130

Query: 131 GDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYN-FSPNKISYGILVKSYCDAG 190
              GTPRSA+SFNALL+AC HSK FDKVPQLFDE+P+RYN   P+KISYGIL+KSYCD+G
Sbjct: 131 DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSG 190

Query: 191 SPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYN 250
           +PEKA++I+R+M+   +EVT + FTTI+++LYKKGE   A+ +W++M+ KGCELD  AYN
Sbjct: 191 TPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN 250

Query: 251 VRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEING 310
           VR+M      PERV+ +IEEM++ GLKPD ISYNYLMT YC+ GM+DEAKKVY  +E N 
Sbjct: 251 VRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 310

Query: 311 CNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAK 370
           C  NAATFRT I+HLC +  YE+GY +FK+SV M+KIPDFNTLK+LV GLVE K   +AK
Sbjct: 311 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAK 370

Query: 371 GLIRTVRKKFPPDTLKAWREVEEGVGLASAGD 402
           GLIRTV+KKFPP  L AW+++EE +GL S  D
Sbjct: 371 GLIRTVKKKFPPSFLNAWKKLEEELGLYSKTD 400

[Close]

BLAST of Cmc07g0200191.1 vs. TAIR 10
Match: AT2G18520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 451.8 bits (1161), Expect = 5.9e-127
Identity = 226/392 (57.65%), Postives = 296/392 (75.51%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRY 70
           +RR ST  A    + T     ++++SKAKSKLR   DPDKAL IY SVS++ TSP++SRY
Sbjct: 11  LRRFST--ATGIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRY 70

Query: 71  AQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQM 130
           A E+T++RLAKS+RF DIE+LIESHKN+PKI  E FLSTLIRSYGR  MF+HAM+ + +M
Sbjct: 71  AMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEM 130

Query: 131 GDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRY-NFSPNKISYGILVKSYCDAG 190
             LGTPR+ +SFNALL+AC HS  F++VPQLFDE P+RY N +P+KISYG+L+KSYCD+G
Sbjct: 131 DKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSG 190

Query: 191 SPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYN 250
            PEKA++I+R+ME   VEVT + FTTI+ +LYK G   EAE +W +M++KGC+LD   YN
Sbjct: 191 KPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN 250

Query: 251 VRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEING 310
           VRLM+     PERV+ ++EEM++ GLKPD +SYNYLMT YC  GM+ EAKKVY  +E   
Sbjct: 251 VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE--- 310

Query: 311 CNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAK 370
              NAATFRT I+HLC NG Y++G  VFK+S  ++KIPDF T K+L EGLV+   M +A+
Sbjct: 311 -QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDAR 370

Query: 371 GLIRTVRKKFPPDTLKAWREVEEGVGLASAGD 402
           G+ R V+KKFPP  +  W+++EE +GL S G+
Sbjct: 371 GVARIVKKKFPPRLVTEWKKLEEKLGLYSKGN 396

[Close]

BLAST of Cmc07g0200191.1 vs. TAIR 10
Match: AT1G61870.1 (pentatricopeptide repeat 336 )

HSP 1 Score: 202.2 bits (513), Expect = 8.1e-52
Identity = 114/383 (29.77%), Postives = 208/383 (54.31%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSVSSHYTSPVTSRY 70
           IR LS+A+   + ++    +S      A S L++E DPD+ LEI  + S      +  R 
Sbjct: 23  IRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRI-DRI 82

Query: 71  AQEITIRRLAKSRRFKDIESLIESH-KNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQ 130
           A    +  LA+ + F  + +L++   +N P +  E F +  I  Y +  M +H++R +  
Sbjct: 83  AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 142

Query: 131 MGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGILVKSYCDAG 190
           +      R+  S NALL AC  +K + +  +++ EMPK Y   P+  +Y  ++K +C++G
Sbjct: 143 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESG 202

Query: 191 SPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAYN 250
           S   +  I+ EME   ++  + +F  +I+  Y + +S E  K+   M  +G  + V  YN
Sbjct: 203 SASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYN 262

Query: 251 VRLMHE-HGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEIN 310
           +R+       K +  +A+++ M ++G+KP+ ++Y++L+  +C     +EAKK++  M   
Sbjct: 263 IRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNR 322

Query: 311 GCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREA 370
           GC  ++  + T IY+LC+ G++E    + KES++ N +P F+ +K LV GL +   + EA
Sbjct: 323 GCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 382

Query: 371 KGLIRTVRKKFPPDTLKAWREVE 392
           K LI  V++KF  + ++ W EVE
Sbjct: 383 KELIGQVKEKFTRN-VELWNEVE 403

[Close]

BLAST of Cmc07g0200191.1 vs. TAIR 10
Match: AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 1.5e-50
Identity = 115/377 (30.50%), Postives = 208/377 (55.17%), Query Frame = 0


Query: 2   SFSISTRHHIRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIY-SSVSS 61
           +FS ST H  RR  +A  AAA   +    S +++      + +E DP    E +  +  +
Sbjct: 12  NFSFST-HTNRRFFSAVTAAAATPSPPKPSLITL------VNDERDPKFITEKFKKACQA 71

Query: 62  HYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMF 121
            +     + Y  E T+RRLA +++F+ +E ++E     P +++E F++ +I  YGRVGMF
Sbjct: 72  EWFRKNIAVY--ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMF 131

Query: 122 EHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGI 181
           E+A + +++M +    R+ALSFNALL+AC +SK+FD V  +F E+P + +  P+  SY  
Sbjct: 132 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 191

Query: 182 LVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKG 241
           L+K  C  GS  +A+ ++ E+E   ++   +TF  +++  Y KG+  E E+IW +M+ K 
Sbjct: 192 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 251

Query: 242 CELDVGAYNVRLMH-EHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAK 301
            + D+ +YN RL+      K E + ++ +++  + LKPD  ++  ++  +   G +DEA 
Sbjct: 252 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 311

Query: 302 KVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGL 361
             Y ++E NGC      F + +  +C+ G+ E  Y++ KE      + D   L+ +V+ L
Sbjct: 312 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 371

Query: 362 VEKKMMREAKGLIRTVR 377
           V+     EA+ ++   +
Sbjct: 372 VKGSKQDEAEEIVELAK 379

[Close]

BLAST of Cmc07g0200191.1 vs. TAIR 10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 4.5e-50
Identity = 114/369 (30.89%), Postives = 200/369 (54.20%), Query Frame = 0


Query: 11  IRRLSTAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSV--SSHYTSPVTS 70
           IRR S+AA   +     T + S       S +  E +P + +E +     S  + + +  
Sbjct: 17  IRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIA- 76

Query: 71  RYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYN 130
               + T+RRL  ++R   +E ++E  K    +++E F + +I  YG+ GMFE+A + + 
Sbjct: 77  --VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFE 136

Query: 131 QMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISYGILVKSYCDA 190
           +M +    RS LSFNALLSA   SK+FD V +LF+E+P + +  P+ +SY  L+K+ C+ 
Sbjct: 137 EMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEK 196

Query: 191 GSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMISKGCELDVGAY 250
            S  +A+ +L E+E   ++   VTF T++ + Y KG+    E+IW KM+ K   +D+  Y
Sbjct: 197 DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTY 256

Query: 251 NVRLMH-EHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEAKKVYNDMEI 310
           N RL+   +  K + +  +  E+  SGLKPD  S+N ++      G +DEA+  Y ++  
Sbjct: 257 NARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVK 316

Query: 311 NGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMRE 370
           +G   + ATF   +  +C+ G++E   ++FKE+     +    TL+ LV+ LV+     E
Sbjct: 317 HGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREE 376

Query: 371 AKGLIRTVR 377
           A+ +++  +
Sbjct: 377 AEEIVKIAK 382

The following BLAST results are available for this feature:

BLAST of Cmc07g0200191.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453729.1	1.5e-233	99.05	PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial ...	[more]
XP_031740385.1	6.8e-218	92.64	pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Cucumis sa...	[more]
XP_038876778.1	1.2e-201	87.14	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Benin...	[more]
XP_023553152.1	6.2e-195	83.61	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucur...	[more]
XP_022985077.1	3.1e-194	83.22	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucur...	[more]

BLAST of Cmc07g0200191.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M065	3.0e-144	64.54	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]
Q9ZU67	8.3e-126	57.65	Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidop...	[more]
Q8LE47	1.1e-50	29.77	Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop...	[more]
Q9LK57	2.2e-49	30.50	Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop...	[more]
Q9LG23	6.3e-49	30.89	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]

BLAST of Cmc07g0200191.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1X8	7.3e-234	99.05	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BX19	7.3e-234	99.05	pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Cucumis ...	[more]
A0A0A0KXX6	5.1e-203	91.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038790 PE=4 SV=1	[more]
A0A6J1J3W0	1.5e-194	83.22	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like OS=Cuc...	[more]
A0A6J1ETZ0	9.7e-194	84.52	scarecrow-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111435912 PE=3 SV=1	[more]

BLAST of Cmc07g0200191.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36680.1	2.2e-145	64.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G18520.1	5.9e-127	57.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G61870.1	8.1e-52	29.77	pentatricopeptide repeat 336	[more]
AT3G13160.1	1.5e-50	30.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G55890.1	4.5e-50	30.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 140..186 e-value: 4.9E-9 score: 36.2 coord: 277..326 e-value: 1.1E-12 score: 48.0 coord: 210..250 e-value: 8.7E-9 score: 35.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 108..134 e-value: 0.0011 score: 19.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 141..174 e-value: 4.1E-6 score: 24.6 coord: 316..348 e-value: 1.4E-4 score: 19.8 coord: 280..312 e-value: 4.9E-10 score: 37.0 coord: 211..245 e-value: 2.5E-8 score: 31.6 coord: 176..209 e-value: 5.5E-8 score: 30.5 coord: 108..134 e-value: 5.1E-5 score: 21.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 209..243 score: 11.191545
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 278..312 score: 12.495939
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 313..347 score: 9.54735
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 138..168 score: 8.6266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 11.509422
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 254..414 e-value: 1.1E-27 score: 99.3 coord: 164..253 e-value: 8.2E-24 score: 86.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 6..163 e-value: 4.6E-13 score: 51.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..420
None	No IPR available	PANTHER	PTHR46128:SF14	BNAA09G52830D PROTEIN	coord: 8..404
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 8..404
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 185..372

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0200191	Cmc07g0200191	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200191.1-exon	Cmc07g0200191.1-exon-CMiso1.1chr07:22852738..22855526	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200191.1-five_prime_utr	Cmc07g0200191.1-five_prime_utr-CMiso1.1chr07:22852738..22852813	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200191.1-cds	Cmc07g0200191.1-cds-CMiso1.1chr07:22852814..22854076	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200191.1-three_prime_utr	Cmc07g0200191.1-three_prime_utr-CMiso1.1chr07:22854077..22855526	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200191.1	Cmc07g0200191.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding