Cmc07g0199351.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0199351.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein SPIRAL1-like 5
Location	CMiso1.1chr07: 22332150 .. 22333124 (+)
Sequence length	855
RNA-Seq Expression	Cmc07g0199351.1
Synteny	Cmc07g0199351.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGATCATATCATCATATATATATATATATATAAAAAATTAACCAACCAAAATTAGGGTTTCAAACTTTCTTTTGTGTTCTTGGTGTAGTAAAGTTGAAGATCAGATCCACCCTCTCAAAGCGAAATATCATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAAGGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCCTTATGGTATTGATCTCAACCCTGATGATGATCATCATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAAGAATAATTATCCTCGAGCTCACGGCCAAAACTCCGGCAACTTCATAACGGTAACTATATTTTTCGACCTGGATATGGTTTTCAAATGAATTATGTTGTTAATCACTCCTAATCTTTTTGCGTATAAAATTTCGGGTTTAATTAAAATTATTTCCTAAACTTTGATTCAGGATCGTCCATCAACCAAGGTGAAATCTGCCCCGGGAGGTGATTCGTCGTTAGGGTATCTGTTTGGAGATAAGTGAAATATATGAATGAGTATGTCTTTTGATTTACTCTCTCTCTAGCTGACTATATATGAAAGAAAATTCTAAAGGGGTTATGGTTTAGTATGAGTGGTTTTTTTTCTAAATAAATGTGTGCTATTATTATGTTTAGTATTTGAAAGAAAACATATCAACATATATGTGTGTATGTGTATATATATAGTTTGGTGTAGCTTGTACTTGTGTTTATATAGTGATCTATTTGTTAAACAAATTAAATCTGATGATTCAGATATCTATGTATTGAAAAATAGCATCATGATGATTGTAGTTTTATTATGTGTCAATTTGTCAAAAAATGTGAGGACCATATACACATGAAATTGCTCTTTGTTATTTAATTTGGGTGTTCTAATTCATTGTGTTTGTGGTTGCTTTAAAAGGGGAGTAGTTG

mRNA sequence

AAAGATCATATCATCATATATATATATATATATAAAAAATTAACCAACCAAAATTAGGGTTTCAAACTTTCTTTTGTGTTCTTGGTGTAGTAAAGTTGAAGATCAGATCCACCCTCTCAAAGCGAAATATCATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAAGGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCCTTATGGTATTGATCTCAACCCTGATGATGATCATCATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAAGAATAATTATCCTCGAGCTCACGGCCAAAACTCCGGCAACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCCCCGGGAGGTGATTCGTCGTTAGGGTATCTGTTTGGAGATAAGTGAAATATATGAATGAGTATGTCTTTTGATTTACTCTCTCTCTAGCTGACTATATATGAAAGAAAATTCTAAAGGGGTTATGGTTTAGTATGAGTGGTTTTTTTTCTAAATAAATGTGTGCTATTATTATGTTTAGTATTTGAAAGAAAACATATCAACATATATGTGTGTATGTGTATATATATAGTTTGGTGTAGCTTGTACTTGTGTTTATATAGTGATCTATTTGTTAAACAAATTAAATCTGATGATTCAGATATCTATGTATTGAAAAATAGCATCATGATGATTGTAGTTTTATTATGTGTCAATTTGTCAAAAAATGTGAGGACCATATACACATGAAATTGCTCTTTGTTATTTAATTTGGGTGTTCTAATTCATTGTGTTTGTGGTTGCTTTAAAAGGGGAGTAGTTG

Coding sequence (CDS)

ATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAAGGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCCTTATGGTATTGATCTCAACCCTGATGATGATCATCATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAAGAATAATTATCCTCGAGCTCACGGCCAAAACTCCGGCAACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCCCCGGGAGGTGATTCGTCGTTAGGGTATCTGTTTGGAGATAAGTGA

Protein sequence

MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

Homology

[Close]

BLAST of Cmc07g0199351.1 vs. NCBI nr
Match: XP_008452039.1 (PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa] >TYK16640.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of Cmc07g0199351.1 vs. NCBI nr
Match: XP_004146520.1 (protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_015032 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP DDH+NNPSPSPKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP-DDHNNNPSPSPKQLV 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 102
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of Cmc07g0199351.1 vs. NCBI nr
Match: XP_038883008.1 (protein SPIRAL1-like 5 [Benincasa hispida])

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD+++NNPSPSPKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNNPSPSPKQLV 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  S-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101

[Close]

BLAST of Cmc07g0199351.1 vs. NCBI nr
Match: XP_022941576.1 (protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like 5 [Cucurbita maxima] >XP_023545276.1 protein SPIRAL1-like 5 [Cucurbita pepo subsp. pepo] >KAG6600565.1 Protein SPIRAL1-like 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031205.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.5 bits (467), Expect = 4.6e-43
Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAA 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  S-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Cmc07g0199351.1 vs. NCBI nr
Match: XP_022136791.1 (protein SPIRAL1-like 5 [Momordica charantia])

HSP 1 Score: 181.0 bits (458), Expect = 5.1e-42
Identity = 90/102 (88.24%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFG DDQP KPQVS+V+LPPPYGID++P DD  NNPSPSPKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSRVILPPPYGIDISP-DDQSNNPSPSPKQLV 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           S NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Sbjct: 61  S-NNYPRAHGQNSGNFLTDRPSTKVKSAPGXDSSLGYLFGDK 100

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy Swiss-Prot
Match: Q8LGD1 (Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.9e-26
Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDDHHNNPSPSPKQ 60
           MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D + ++DH  +  P    
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPAPPYGVD-STEEDHEADQKPK--- 60

Query: 61  LVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
            +S NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  -ISNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18
Identity = 59/114 (51.75%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPR---KPQVSKVVLPPPYGIDLNPDDDHHNNPSP--- 60
           MSRGGS GGG+SSLGYLFG ++ P+   KP  +    P P              PSP   
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 61  -SPKQLV-------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 101
            + KQ+        S NNY RA GQN+GNF+TDRPSTKV +APGG SSLGYLFG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-17
Identity = 56/106 (52.83%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           M RG S GGG+SSLGYLFG  + P+   V+K            P      N   S KQ+ 
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  ------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 101
                 S NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17
Identity = 55/117 (47.01%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           M RG S GGG+SSLGYLFG  + P KP ++    P    + ++ D        PSPK + 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISAD--------PSPKHVA 60

Query: 61  -----------------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 101
                            S NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  AQTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.4e-15
Identity = 49/99 (49.49%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           M RG S GGG+SSLGYLFG  + P+  +      P P                P+  Q  
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAPKSAE-----KPAPVQKPAPSSSAEKLKEIPAGIQSS 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF 100
             NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Sbjct: 61  KANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLF 94

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy TrEMBL
Match: A0A5D3CZ49 (Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004680 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.8e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy TrEMBL
Match: A0A1S3BTQ0 (protein SPIRAL1-like 5 OS=Cucumis melo OX=3656 GN=LOC103493166 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.8e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy TrEMBL
Match: A0A0A0KUV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.7e-48
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP DDH+NNPSPSPKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP-DDHNNNPSPSPKQLV 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 102
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy TrEMBL
Match: A0A6J1J7K0 (protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43
Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAA 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  S-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Cmc07g0199351.1 vs. ExPASy TrEMBL
Match: A0A6J1FLH4 (protein SPIRAL1-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111446889 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43
Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAA 60

Query: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
           S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  S-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Cmc07g0199351.1 vs. TAIR 10
Match: AT4G23496.1 (SPIRAL1-like5 )

HSP 1 Score: 117.9 bits (294), Expect = 4.9e-27
Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDDHHNNPSPSPKQ 60
           MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D + ++DH  +  P    
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPAPPYGVD-STEEDHEADQKPK--- 60

Query: 61  LVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 103
            +S NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  -ISNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of Cmc07g0199351.1 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 90.5 bits (223), Expect = 8.4e-19
Identity = 56/106 (52.83%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           M RG S GGG+SSLGYLFG  + P+   V+K            P      N   S KQ+ 
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  ------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 101
                 S NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Cmc07g0199351.1 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 90.5 bits (223), Expect = 8.4e-19
Identity = 56/106 (52.83%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           M RG S GGG+SSLGYLFG  + P+   V+K            P      N   S KQ+ 
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  ------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 101
                 S NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Cmc07g0199351.1 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18
Identity = 55/117 (47.01%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60
           M RG S GGG+SSLGYLFG  + P KP ++    P    + ++ D        PSPK + 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISAD--------PSPKHVA 60

Query: 61  -----------------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 101
                            S NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  AQTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of Cmc07g0199351.1 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 77.4 bits (189), Expect = 7.4e-15
Identity = 55/125 (44.00%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSP------ 60
           M RG S GGG+SSL YLFG D    KP    V  P P   + N      N P+P      
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKP----VPAPRPAPTESN------NGPAPPVTAVT 60

Query: 61  -----------SPKQLVSK---------NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS 100
                       P +L  +         NNY RA GQN+GNF+TDRPSTKV +APGG SS
Sbjct: 61  ATALTTATTSVEPAELNKQIPAGIKTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSS 115

The following BLAST results are available for this feature:

BLAST of Cmc07g0199351.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452039.1	1.2e-51	100.00	PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-l...	[more]
XP_004146520.1	1.4e-47	97.03	protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_01...	[more]
XP_038883008.1	1.8e-47	96.08	protein SPIRAL1-like 5 [Benincasa hispida]	[more]
XP_022941576.1	4.6e-43	90.20	protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like...	[more]
XP_022136791.1	5.1e-42	88.24	protein SPIRAL1-like 5 [Momordica charantia]	[more]

BLAST of Cmc07g0199351.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD1	6.9e-26	60.58	Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1	[more]
Q7Y1L9	1.4e-18	51.75	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
Q9LE54	1.2e-17	52.83	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
B3H4F1	2.6e-17	47.01	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q2QQ99	9.4e-15	49.49	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]

BLAST of Cmc07g0199351.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZ49	5.8e-52	100.00	Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3BTQ0	5.8e-52	100.00	protein SPIRAL1-like 5 OS=Cucumis melo OX=3656 GN=LOC103493166 PE=3 SV=1	[more]
A0A0A0KUV0	6.7e-48	97.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1	[more]
A0A6J1J7K0	2.2e-43	90.20	protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1	[more]
A0A6J1FLH4	2.2e-43	90.20	protein SPIRAL1-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111446889 PE=3 SV=1	[more]

BLAST of Cmc07g0199351.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23496.1	4.9e-27	60.58	SPIRAL1-like5	[more]
AT1G69230.1	8.4e-19	52.83	SPIRAL1-like2	[more]
AT1G69230.2	8.4e-19	52.83	SPIRAL1-like2	[more]
AT1G26355.1	1.9e-18	47.01	SPIRAL1-like1	[more]
AT2G03680.1	7.4e-15	44.00	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	PANTHER	PTHR33403:SF19	PROTEIN SPIRAL1-LIKE 5	coord: 1..102
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 1..102

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0199351	Cmc07g0199351	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199351.1-exon	Cmc07g0199351.1-exon-CMiso1.1chr07:22332150..22332514	exon
Cmc07g0199351.1-exon	Cmc07g0199351.1-exon-CMiso1.1chr07:22332635..22333124	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199351.1-five_prime_utr	Cmc07g0199351.1-five_prime_utr-CMiso1.1chr07:22332150..22332280	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199351.1-cds	Cmc07g0199351.1-cds-CMiso1.1chr07:22332281..22332514	CDS
Cmc07g0199351.1-cds	Cmc07g0199351.1-cds-CMiso1.1chr07:22332635..22332709	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199351.1-three_prime_utr	Cmc07g0199351.1-three_prime_utr-CMiso1.1chr07:22332710..22333124	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199351.1	Cmc07g0199351.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis