Cmc07g0198701.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0198701.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 21809692 .. 21811883 (+)
Sequence length	1619
RNA-Seq Expression	Cmc07g0198701.1
Synteny	Cmc07g0198701.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAACGTATATATCTTGTTATATAGTTCCTTTACTTTTACATTTACCAAAATTTTTCAACACAATATATATATATATATATATATATATATATAAAAAAAAATAAACGATAGTTATAACAGAAACAATTAGCATCAAATCATTCTATTGTTTCTGACCTTCTTCCCAAGCATGGCGTCCTTGAGCTGATCGTAGCGGTTTCGATGGTGATCAATCACAACGCATAGTTGTCGAATCACTTCTCTCTTCTCTTCTGCAAGTCGGAACACTTCTTCATCTTTCTCCTTCAGTATATTCTCCATTTTCGTCATCTTCTTCTCGAATTGTCCTAACGTTCTGATCAGGTTCAGTTTCTCTCCTCCTTCTTTGCTTATTTTCGCCTCTAGATTCCATAGTTTCTCTCTTAACAAGAACTCCTGTTCTTCTTTTTCCTCCATTTGAGCAACGAATCGGGTTAAATTTGTTTTCAGTTGTTTTAACTCGTTGTTTCGCGTTCTAACCCAGTATTTTGCGAATGTAAGCTCCTTTGTGATCCATAATATATGATTTAGAAGCTTCGCGCTCTCTTCTTCGAATTTTCTTGCCATTCTGTCCATTCCGAATTCGTTCATGTTGCCCAGTTTCATCAGTTCCGCTTCGTGATTTACTATTTTTTGTTCCAACTGTCTCTTCTCTTGTTCGTGTCTTTTGTTTCTTGCTCTGAAGCTTTCTCTGCTTTCGTTGTGTAGTTGCTCTGCTACGAGAATTCTCTGAGATAGTAGACGGATTTTATCTTCCATGCCGCTTCGGAGCTCTTCTGCCAACTCTTCCATTTTTCTCTCTGCGCTTACCAGAGTCGAAGCGACGTCGGGTAAGCAATTTCTCGCTTGCTTGTATTTCTCGTTAAATGTGATTATTGTTTCGTCCTTTTCTTTTAGGATTCTTTCCTGATCGACGATTTTGCTTTTCAATTTGTTGTTTTCCTCCTCGATTTCGGAGAATTTGTGAGTAAATTCTTGTTTATATTGCTCCATTTCTTGCCCTAATTTGGTTTTTTCAGCCTGCGATCCATCCACACTCTCTTTCAGATTCTTGACTTGCTCCATCAACGCGATCATCTGAGAAGAAGCTTCCGTTTCTCTACTCGTCAATGCCATCTCCAATTCAGTATTCTTAGTGTTAAGCCATTGATTTTCGGATCTCATCCGAATATTTTGTTCTTCTATTTCCCTTCTTCGGTAATGTAGACTGTCTAATTCCGTTTCCAGGTCCTTAATTCGGATAAGAACTCTCTCTTTCTCTTCTAGAATCTTCTGTTCAACTCCAATCTTTTTCGATATTTCTTGTTTCAAATTACCTATCAAAGCCACATTCTCAGATATTTCCTTGTTTTTCCTATTTTCCAATTCGCGTTTCTGGCTTCGTACACTATCTAGTTCTCGATGCAGAAAATCAACCTTAGCCAAGGCTTCATTCTTTTGTACAATTTGCTTTTCTAGTTCATCGGCTTGAATTTGAGCATGGAAGTTGTTTGAGCGTTCATCCTGTAAATTATGAGCATTGCTGGTGTTTACTTCCTCCGACGAAAAGTATTCTGAATCGGAATCAGAACTAGAGCTTGAAGATGAAGAAGAGACATCTTCCTTGTCCTGTTCGTTTTCATTTTTGGAATTAAAGATTCTTTCAGCTTCATCTCGTAGATGACCATATTGTTCATAAATAGACTGGTAGTTTTTGTATAGATCTTCAACAAGGCCAACAACTTCCGTTTCTTTCTTCGAGTCCTTTGGCATTCCTCTGCTTTTTCCTTGATCTTTGTTCTTCATTAGCTTCAAGATTCTCGTCATCTTTTGTTCCATTTCTGAAAATTGAACAATTTCGGTTATCTTAAAAAAAATGAAGAAAGAAAGCCGCAAGTAATTAGTTTTATTTGTTCCGCATTTGATGCACTATAGTTTTGAAGAACAGTTATCAAGTAGATAATTTACGAACTTATGATAACAAAAACACAACAAAGGCTGCAATTTTATTTGTTATGAAAAAAAATGTGATGGGCAAGTCGATTCAAGCTATGACTATCAAAACCTGTCACCTCTATAATAGAAGGTCATGCCGATTATAGATAGATAAATATTTTGAGCTACACTATTTCTTAAATACATATATTTGGCTAATATTGGTAAGCTTCTTATGAATGAAAGAAACACATTAAA

mRNA sequence

TGTAACGTATATATCTTGTTATATAGTTCCTTTACTTTTACATTTACCAAAATTTTTCAACACAATATATATATATATATATATATATATATATAAAAAAAAATAAACGATAGTTATAACAGAAACAATTAGCATCAAATCATTCTATTGTTTCTGACCTTCTTCCCAAGCATGGCGTCCTTGAGCTGATCGTAGCGGTTTCGATGGTGATCAATCACAACGCATAGTTGTCGAATCACTTCTCTCTTCTCTTCTGCAAGTCGGAACACTTCTTCATCTTTCTCCTTCAGTATATTCTCCATTTTCGTCATCTTCTTCTCGAATTGTCCTAACGTTCTGATCAGTTGCTCTGCTACGAGAATTCTCTGAGATAGTAGACGGATTTTATCTTCCATGCCGCTTCGGAGCTCTTCTGCCAACTCTTCCATTTTTCTCTCTGCGCTTACCAGAGTCGAAGCGACGTCGGCCTGCGATCCATCCACACTCTCTTTCAGATTCTTGACTTGCTCCATCAACGCGATCATCTGAGAAGAAGCTTCCGTTTCTCTACTCGTCAATGCCATCTCCAATTCAGTATTCTTAGTGTTAAGCCATTGATTTTCGGATCTCATCCGAATATTTTGTTCTTCTATTTCCCTTCTTCGGTAATGTAGACTGTCTAATTCCGTTTCCAGGTCCTTAATTCGGATAAGAACTCTCTCTTTCTCTTCTAGAATCTTCTGTTCAACTCCAATCTTTTTCGATATTTCTTGTTTCAAATTACCTATCAAAGCCACATTCTCAGATATTTCCTTGTTTTTCCTATTTTCCAATTCGCGTTTCTGGCTTCGTACACTATCTAGTTCTCGATGCAGAAAATCAACCTTAGCCAAGGCTTCATTCTTTTGTACAATTTGCTTTTCTAGTTCATCGGCTTGAATTTGAGCATGGAAGTTGTTTGAGCGTTCATCCTGTAAATTATGAGCATTGCTGGTGTTTACTTCCTCCGACGAAAAGTATTCTGAATCGGAATCAGAACTAGAGCTTGAAGATGAAGAAGAGACATCTTCCTTGTCCTGTTCGTTTTCATTTTTGGAATTAAAGATTCTTTCAGCTTCATCTCGTAGATGACCATATTGTTCATAAATAGACTGGTAGTTTTTGTATAGATCTTCAACAAGGCCAACAACTTCCGTTTCTTTCTTCGAGTCCTTTGGCATTCCTCTGCTTTTTCCTTGATCTTTGTTCTTCATTAGCTTCAAGATTCTCGTCATCTTTTGTTCCATTTCTGAAAATTGAACAATTTCGGTTATCTTAAAAAAAATGAAGAAAGAAAGCCGCAAGTAATTAGTTTTATTTGTTCCGCATTTGATGCACTATAGTTTTGAAGAACAGTTATCAAGTAGATAATTTACGAACTTATGATAACAAAAACACAACAAAGGCTGCAATTTTATTTGTTATGAAAAAAAATGTGATGGGCAAGTCGATTCAAGCTATGACTATCAAAACCTGTCACCTCTATAATAGAAGGTCATGCCGATTATAGATAGATAAATATTTTGAGCTACACTATTTCTTAAATACATATATTTGGCTAATATTGGTAAGCTTCTTATGAATGAAAGAAACACATTAAA

Coding sequence (CDS)

ATGCCGCTTCGGAGCTCTTCTGCCAACTCTTCCATTTTTCTCTCTGCGCTTACCAGAGTCGAAGCGACGTCGGCCTGCGATCCATCCACACTCTCTTTCAGATTCTTGACTTGCTCCATCAACGCGATCATCTGA

Protein sequence

MPLRSSSANSSIFLSALTRVEATSACDPSTLSFRFLTCSINAII

Homology

The following BLAST results are available for this feature:

BLAST of Cmc07g0198701.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0198701.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0198701.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0198701.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0198701	Cmc07g0198701	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0198701.1-exon	Cmc07g0198701.1-exon-CMiso1.1chr07:21809692..21810035	exon
Cmc07g0198701.1-exon	Cmc07g0198701.1-exon-CMiso1.1chr07:21810420..21810541	exon
Cmc07g0198701.1-exon	Cmc07g0198701.1-exon-CMiso1.1chr07:21810731..21811883	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0198701.1-five_prime_utr	Cmc07g0198701.1-five_prime_utr-CMiso1.1chr07:21809692..21810035	five_prime_UTR
Cmc07g0198701.1-five_prime_utr	Cmc07g0198701.1-five_prime_utr-CMiso1.1chr07:21810420..21810468	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0198701.1-cds	Cmc07g0198701.1-cds-CMiso1.1chr07:21810469..21810541	CDS
Cmc07g0198701.1-cds	Cmc07g0198701.1-cds-CMiso1.1chr07:21810731..21810792	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0198701.1-three_prime_utr	Cmc07g0198701.1-three_prime_utr-CMiso1.1chr07:21810793..21811883	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0198701.1	Cmc07g0198701.1-protein	polypeptide