Cmc07g0198241.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc07g0198241.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr07: 21473008 .. 21474818 (+)
Sequence length1751
RNA-Seq ExpressionCmc07g0198241.1
SyntenyCmc07g0198241.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGTTCAATATCAAATATCAAAGATATTCAACCTTCAATGACATGGCTCGGATCACATACATTTAAATTCATGTCATGCGTTTTTTAGAAAAAAACAATTAGATAAGAGATCATTCACCATTATCAGCTCTGGTGATCGAGAATATGTACCATAGTTATCCACCTTGATGCCATGAAAATACACAGGTAGCCTGAAGTTTTTTGATTGTCGGCGATCTAGGCTCAAAACAGAAGTACCAAAATATCAAAATATTCTGCAACCAAAAAACTGTAGCAGTTCCAAAACTAAAACCCCTTCCCTCTTTCATTGTGATAAACGTGGCTTCCATAGATACATAGCATCACGGCTTCAAACCAATCAACCATCAGGTGATTGCTTACTTCACATTATTTGTGATTGCATATTCTTAATAGCTTTTTCTATGGCAGGTACATTCTTCTTAAAGACAGACCATTGTTCTTCAGTCAAGCTTATTCCTGAGGCAAAACAAAAATAAGAGCAGTGTTATTAGCCTGAAATAACAAGCCAGATTAATTTCCAAAACAGAGAGAAGGAATTGTATGAGTTTAATCAAAGATCCTCCAAGTTCATAAGAAAAAGAGATCAACAAGCAATGGGTTTACAAACACCATCCCCATTTCCTTGCTTTATTCAAGTTAAACTCATACAAGCTTCACACAATTACTTGAATCAGAGATGTCATAAATCAAATGCCTGGCCCTTGGTGCTCATTCAACTTCAATCAACGAAAATTATCCTTTTATTTTTTCCCATGTCATTGGTCCAATAATTGTGTTGTCTTTACTTATAATTGGCCAACATGTTCTAAGAAACAGTCCATTTGGTACAACTTTTTCTACTTCCATTGCATCATTATGGTTACGGAATAGAAAATGTTCAAAATATTCATAATATCGAACAAGAAGCAAACAATTGACAGGAGTTCCACCTAATTTGCATTCTCTATAAGTAATATATTAACACACAAAAATCCACAAACACAAGCAAATAGCATTTGGAGAATCACCTTTAGCTGTAGGGAGGTCTTTTCCATCCTTTCTATAAAACTCCCTAATCGAAACCAGAGTCTTCCCTCTAAAATCCTGAATCGTCACCTTCCTCTTGCTTGATAACTGAGCCAAATAACACCAAAATTTCAAAATTCACCACAAACATAATAGCAAAAAGAAATTGAAATCGCAAGCTACTGGAAACGAGAAGAGGCAGAAAAGAAAAGAACAGAAAAAAGAAGAAAAAAAGCACAAACCCAACAAACAATGAGATCGCCGTCGTCGTCGTACTCCTTCTCCTTAGCAGCAGAGGCATCCTCGGCTTGGTCTTGAGGCTGTTGTTCAGAACGTTCTTGGAGAAATGATTCGACAACGGTGCGAACGAGAGACTTGTAAGGGGATTTGGAGAGGTCGAGATCGAGGTCCTTAGAGGCAAGGGCTCGAATTTTGGACTCGGTCATTTCGTCCATGTCGGAAGTTTCGAGAATTCTGCGGACAGCTTCCTCGATTCTGCGTTGGGTTTCGGAATCCATAGCCAAATTCTTGGATTACTTCTCCGTGGATTTCTAGTGAAGAGAGTGAATTAAGCTGAAAAATTGAAAGATAATGAAATTTTAGGGAAAGTTTTTGCTTTGGGCTGAGCTCAGCTCAATCTTTCTATTTTACATTCCTGTTCGGTCAAATAAATAAATAAATAAAAATAGAAAAAACCATTTTCTTACCTCAATTATAGCAAATTGCAAATGTTGGTATATAATTTAGTAACCCATAGATTAAGTTTTGATCAATAAGAACGTGT

mRNA sequence

TCAGTTCAATATCAAATATCAAAGATATTCAACCTTCAATGACATGGCTCGGATCACATACATTTAAATTCATGTCATGCGTTTTTTAGAAAAAAACAATTAGATAAGAGATCATTCACCATTATCAGCTCTGGTGATCGAGAATATGTACCATAGTTATCCACCTTGATGCCATGAAAATACACAGGTAGCCTGAAGTTTTTTGATTGTCGGCGATCTAGGCTCAAAACAGAAGTACCAAAATATCAAAATATTCTGCAACCAAAAAACTGTAGCAGTTCCAAAACTAAAACCCCTTCCCTCTTTCATTGTGATAAACGTGGCTTCCATAGATACATAGCATCACGGCTTCAAACCAATCAACCATCAGGTACATTCTTCTTAAAGACAGACCATTGTTCTTCAGTCAAGCTTATTCCTGAGGCAAAACAAAAATAAGAGCAGTGTTATTAGCCTGAAATAACAAGCCAGATTAATTTCCAAAACAGAGAGAAGGAATTGTATGAGTTTAATCAAAGATCCTCCAAGTTCATAAGAAAAAGAGATCAACAAGCAATGGGTTTACAAACACCATCCCCATTTCCTTGCTTTATTCAAGTTAAACTCATACAAGCTTCACACAATTACTTGAATCAGAGATGTCATAAATCAAATGCCTGGCCCTTGGTGCTCATTCAACTTCAATCAACGAAAATTATCCTTTTATTTTTTCCCATGTCATTGGTCCAATAATTGTGTTGTCTTTACTTATAATTGGCCAACATGTTCTAAGAAACAGTCCATTTGGTACAACTTTTTCTACTTCCATTGCATCATTATGGTTACGGAATAGAAAATGTTCAAAATATTCATAATATCGAACAAGAAGCAAACAATTGACAGGAGTTCCACCTAATTTGCATTCTCTATAAGTAATATATTAACACACAAAAATCCACAAACACAAGCAAATAGCATTTGGAGAATCACCTTTAGCTGTAGGGAGGTCTTTTCCATCCTTTCTATAAAACTCCCTAATCGAAACCAGAGTCTTCCCTCTAAAATCCTGAATCGTCACCTTCCTCTTGCTTGATAACTGAGCCAAATAACACCAAAATTTCAAAATTCACCACAAACATAATAGCAAAAAGAAATTGAAATCGCAAGCTACTGGAAACGAGAAGAGGCAGAAAAGAAAAGAACAGAAAAAAGAAGAAAAAAAGCACAAACCCAACAAACAATGAGATCGCCGTCGTCGTCGTACTCCTTCTCCTTAGCAGCAGAGGCATCCTCGGCTTGGTCTTGAGGCTGTTGTTCAGAACGTTCTTGGAGAAATGATTCGACAACGGTGCGAACGAGAGACTTGTAAGGGGATTTGGAGAGGTCGAGATCGAGGTCCTTAGAGGCAAGGGCTCGAATTTTGGACTCGGTCATTTCGTCCATGTCGGAAGTTTCGAGAATTCTGCGGACAGCTTCCTCGATTCTGCGTTGGGTTTCGGAATCCATAGCCAAATTCTTGGATTACTTCTCCGTGGATTTCTAGTGAAGAGAGTGAATTAAGCTGAAAAATTGAAAGATAATGAAATTTTAGGGAAAGTTTTTGCTTTGGGCTGAGCTCAGCTCAATCTTTCTATTTTACATTCCTGTTCGGTCAAATAAATAAATAAATAAAAATAGAAAAAACCATTTTCTTACCTCAATTATAGCAAATTGCAAATGTTGGTATATAATTTAGTAACCCATAGATTAAGTTTTGATCAATAAGAACGTGT

Coding sequence (CDS)

ATGGGTTTACAAACACCATCCCCATTTCCTTGCTTTATTCAAGTTAAACTCATACAAGCTTCACACAATTACTTGAATCAGAGATGTCATAAATCAAATGCCTGGCCCTTGGTGCTCATTCAACTTCAATCAACGAAAATTATCCTTTTATTTTTTCCCATGTCATTGGTCCAATAA

Protein sequence

MGLQTPSPFPCFIQVKLIQASHNYLNQRCHKSNAWPLVLIQLQSTKIILLFFPMSLVQ
Homology
The following BLAST results are available for this feature:
BLAST of Cmc07g0198241.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc07g0198241.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc07g0198241.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc07g0198241.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc07g0198241Cmc07g0198241gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0198241.1-exonCmc07g0198241.1-exon-CMiso1.1chr07:21473008..21473377exon
Cmc07g0198241.1-exonCmc07g0198241.1-exon-CMiso1.1chr07:21473438..21474818exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0198241.1-five_prime_utrCmc07g0198241.1-five_prime_utr-CMiso1.1chr07:21473008..21473377five_prime_UTR
Cmc07g0198241.1-five_prime_utrCmc07g0198241.1-five_prime_utr-CMiso1.1chr07:21473438..21473622five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0198241.1-cdsCmc07g0198241.1-cds-CMiso1.1chr07:21473623..21473799CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0198241.1-three_prime_utrCmc07g0198241.1-three_prime_utr-CMiso1.1chr07:21473800..21474818three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc07g0198241.1Cmc07g0198241.1-proteinpolypeptide