Cmc07g0196921.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0196921.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 20175780 .. 20178312 (+)
Sequence length	2533
RNA-Seq Expression	Cmc07g0196921.1
Synteny	Cmc07g0196921.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAACGAGAAAGGGAGAGATCCTTGAAAGGGACAGGGTTTAGATAACAAGTATGTCACACATCATTACGAAAAAAGCTTCAACAAAGACAAGAGAGAGTTGTGAACTCAGACGCTCCCACTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCAGCGCGTGATTTCCAAACCCTACTTTTTGATGGAACAGCGAACAAACAAATTACTCTATCACACCATCTTTTTTTCCTCTCAGGTGGCCGGGGGACGGGCCTTGTCGGATTCTTTTTTTTTTTTTAATTTGGATGCCCATTCATGATGATCATAAAGCACACAATTCAAAATGGTGAACACGTTAATTTTACAAGATCAACAGATTAATAAGACAAACAAAAATTCCCCTGCCGTATTTACATAATACACGATGATGATGATGATGATGATGATTATGATGCCTGTTTTTGTGTTAAGAATTAGCAAATTCAAACCAAATCCGTCTATCATAAAGGGGGAAATTTCAGTATAATCCTAAAACATTGAGAGCAAAATGGAAAAAAAACGGGGTTTGGTTAGTGTTACCCAAAATTAGAAATCCCTTTTCTTCTAATACTCTCACCAATGGATTTTCCCTCCGCCCTCGGTATCCGTGATCCGTCGTGTCGTCGTCCGGTTACTACTACTACTACTGTTGCTGCTGCTATTCTGGTGGTTTCTGCTGCTTCCTCCGTTGCCGGTGAATAATAATGGTCCGAATCCGAATACAGAGACGGATTTTGAGGATCCTCTTAAGGAAGAACAAACTGGAACGTTTAGGACTGGAGTTACTCTCACGTTAGCAGAGTATGACCGTTCCATTCCTCTGTTTTTGAATTTTGGTCCGCCATTGAAGCTGCTGGGACTGCTTGAGCTTCTCTCCAAGTTGTGGAACACGATTTTACCTGACGAGTTCATTCGTGGGCTATCTACGGATACTCCTCGAATCCCTAATCTACTGGAGGATGACGACGATTCTCCAGGCGTACGCCGTATCGGGCTTCTCCCTACTCTTGTCGCCGATGGATGAGGATGATCTGCTGTTGAAGATGATCTTGGATTGCTCTCCGACTTGGGCCTCGGTTTCACCAGTCTCATCCGCGGTGGATTGTTGTGATTAGGGTTCCTATGGAGGGAAATCGGATTCGTGTTTGGCTTATTTTCGCAATCGAGTGACAGTCTGTGAAGATCTTCGTGTTCGTGACCTGAGGAAGAAGAGGAAAGAGATACACGAGAAGAAGATAGTGAAACAGACTCACTATCGGAATCCTTTAGTAATGGAAGGCTCAGAGACGAATCCAACGAGGATGACAACGACGATTTCGAACTCCGGTGAAGGAAGTACTTCAACGCCTTCGAATTAGCTTCGGAGAAGTAAGACGAGGAAGACGTCGTCGTCGTTTTGTGGTTTTCGTTTTTAGCGCTGCCATTGCCATTGCCATTGCCACTGCCACTGCCATTGCCATTGCCATTGCTGCTACTCTGGTACAGCTTTTTGAGCCCTAAAAGCTCCCTCCATCGACTGGAACACCGCGGCGCTTTAGGAGAAAAAAGATACGGATCCGTACTGCATTCTTCCTCAACTCTTCGACGGGACTGAACCGTAGTCTCTGGCGACGAAACACACCTGGTAGACTTCAAACCGTTGACTGAGGGTTTAACAGAGGAGACCTGAAGCGGCACGAGTTTCCCATCAAAAAACAGCTCATCTGCAGGGAGCATCAAGGAGACGGGATCTTGAAGACGGAACTCGAACTCACTAACTGGAACCAGTTCAGGATCCGGATCTCGAGTCTCGGACTCCCCAGCAGCAGGTTTGGTCTTAGATGAAGGTCCAACGAGGTTAGAAGGAGGGGAATCATCACGGCTGAAGGAGAGGCGAGGACCGAGCCAACCGTAGGAATGACATGGAACAGAAGAAGAGCAGTCGAGGAAATTTTCGGAGGAGATTCCGACATTGTTAACGCATGCGGAAGCCATGGATAGGGGTGGGGATGATCATGCGAAGGTGAAATGGAAGAGAGGAGATGGGGAGAAGGAAAGGAGGAAGAAGATGGTCAACGTCTATGGGGGAAATGACATGGGCTGAATATCCGGCGAGATCTGGAGGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTAGGGTTTGGAGAGATGATGAGTTGGCGTTGTAGAAAGAGGACCGTGGTGGCACCGTACAGGAAACTGAGTATTTATATGTTAAAAAGAAAAAAAAAAAAAAAAAAAAAAGGAAATGTAAATTGATAATTGAAAAATGCAAAAGAAGCCAAAGATGGGAATGGCGCCATTTCCATTTATTTGTTAATTAAATAGGAATGACTAATGAGGAGGAGGCAAAGGAGGATAGGCATTGCAGCCCATTTACGCTCCCCTACTCCTTCCCCCTACCGCTAAATTATAAGATTTCATAATTATCAATTCTACACCCCAACCATTCACTATTCCACCTTTCTCTTTTCTCTTTTCTCTTTTCTTTTTCTTTTTC

mRNA sequence

TGAAAACGAGAAAGGGAGAGATCCTTGAAAGGGACAGGGTTTAGATAACAAGTATGTCACACATCATTACGAAAAAAGCTTCAACAAAGACAAGAGAGAGTTGTGAACTCAGACGCTCCCACTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCAGCGCGTGATTTCCAAACCCTACTTTTTGATGGAACAGCGAACAAACAAATTACTCTATCACACCATCTTTTTTTCCTCTCAGGTGGCCGGGGGACGGGCCTTGTCGGATTCTTTTTTTTTTTTTAATTTGGATGCCCATTCATGATGATCATAAAGCACACAATTCAAAATGGTGAACACGTTAATTTTACAAGATCAACAGATTAATAAGACAAACAAAAATTCCCCTGCCGTATTTACATAATACACGATGATGATGATGATGATGATGATTATGATGCCTGTTTTTGTGTTAAGAATTAGCAAATTCAAACCAAATCCGTCTATCATAAAGGGGGAAATTTCAGTATAATCCTAAAACATTGAGAGCAAAATGGAAAAAAAACGGGGTTTGGTTAGTGTTACCCAAAATTAGAAATCCCTTTTCTTCTAATACTCTCACCAATGGATTTTCCCTCCGCCCTCGGTATCCGTGATCCGTCGTGTCGTCGTCCGGTTACTACTACTACTACTGTTGCTGCTGCTATTCTGGTGGTTTCTGCTGCTTCCTCCGTTGCCGGTGAATAATAATGGTCCGAATCCGAATACAGAGACGGATTTTGAGGATCCTCTTAAGGAAGAACAAACTGGAACGTTTAGGACTGGAGTTACTCTCACGTTAGCAGAGTATGACCGTTCCATTCCTCTGTTTTTGAATTTTGGTCCGCCATTGAAGCTGCTGGGACTGCTTGAGCTTCTCTCCAAGTTGTGGAACACGATTTTACCTGACGAGTTCATTCGTGGGCTATCTACGGATACTCCTCGAATCCCTAATCTACTGGAGGATGACGACGATTCTCCAGGCGTACGCCGTATCGGGCTTCTCCCTACTCTTGTCGCCGATGGATGAGGATGATCTGCTGTTGAAGATGATCTTGGATTGCTCTCCGACTTGGGCCTCGGTTTCACCAGTCTCATCCGCGGTGGATTGTTGTGATTAGGGTTCCTATGGAGGGAAATCGGATTCGTGTTTGGCTTATTTTCGCAATCGAGTGACAGTCTGTGAAGATCTTCGTGTTCGTGACCTGAGGAAGAAGAGGAAAGAGATACACGAGAAGAAGATAGTGAAACAGACTCACTATCGGAATCCTTTAGTAATGGAAGGCTCAGAGACGAATCCAACGAGGATGACAACGACGATTTCGAACTCCGGTGAAGGAAGTACTTCAACGCCTTCGAATTAGCTTCGGAGAAGTAAGACGAGGAAGACGTCGTCGTCGTTTTGTGGTTTTCGTTTTTAGCGCTGCCATTGCCATTGCCATTGCCACTGCCACTGCCATTGCCATTGCCATTGCTGCTACTCTGGTACAGCTTTTTGAGCCCTAAAAGCTCCCTCCATCGACTGGAACACCGCGGCGCTTTAGGAGAAAAAAGATACGGATCCGTACTGCATTCTTCCTCAACTCTTCGACGGGACTGAACCGTAGTCTCTGGCGACGAAACACACCTGGTAGACTTCAAACCGTTGACTGAGGGTTTAACAGAGGAGACCTGAAGCGGCACGAGTTTCCCATCAAAAAACAGCTCATCTGCAGGGAGCATCAAGGAGACGGGATCTTGAAGACGGAACTCGAACTCACTAACTGGAACCAGTTCAGGATCCGGATCTCGAGTCTCGGACTCCCCAGCAGCAGGTTTGGTCTTAGATGAAGGTCCAACGAGGTTAGAAGGAGGGGAATCATCACGGCTGAAGGAGAGGCGAGGACCGAGCCAACCGTAGGAATGACATGGAACAGAAGAAGAGCAGTCGAGGAAATTTTCGGAGGAGATTCCGACATTGTTAACGCATGCGGAAGCCATGGATAGGGGTGGGGATGATCATGCGAAGGTGAAATGGAAGAGAGGAGATGGGGAGAAGGAAAGGAGGAAGAAGATGGTCAACGTCTATGGGGGAAATGACATGGGCTGAATATCCGGCGAGATCTGGAGGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTAGGGTTTGGAGAGATGATGAGTTGGCGTTGTAGAAAGAGGACCGTGGTGGCACCGTACAGGAAACTGAGTATTTATATGTTAAAAAGAAAAAAAAAAAAAAAAAAAAAAGGAAATGTAAATTGATAATTGAAAAATGCAAAAGAAGCCAAAGATGGGAATGGCGCCATTTCCATTTATTTGTTAATTAAATAGGAATGACTAATGAGGAGGAGGCAAAGGAGGATAGGCATTGCAGCCCATTTACGCTCCCCTACTCCTTCCCCCTACCGCTAAATTATAAGATTTCATAATTATCAATTCTACACCCCAACCATTCACTATTCCACCTTTCTCTTTTCTCTTTTCTCTTTTCTTTTTCTTTTTC

Coding sequence (CDS)

ATGGGGAGAAGGAAAGGAGGAAGAAGATGGTCAACGTCTATGGGGGAAATGACATGGGCTGAATATCCGGCGAGATCTGGAGGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTAGGGTTTGGAGAGATGATGAGTTGGCGTTGTAG

Protein sequence

MGRRKGGRRWSTSMGEMTWAEYPARSGGERREREREREREREFRVWRDDELAL

Homology

The following BLAST results are available for this feature:

BLAST of Cmc07g0196921.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0196921.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0196921.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0196921.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0196921	Cmc07g0196921	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196921.1-exon	Cmc07g0196921.1-exon-CMiso1.1chr07:20175780..20178312	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196921.1-five_prime_utr	Cmc07g0196921.1-five_prime_utr-CMiso1.1chr07:20175780..20177818	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196921.1-cds	Cmc07g0196921.1-cds-CMiso1.1chr07:20177819..20177980	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196921.1-three_prime_utr	Cmc07g0196921.1-three_prime_utr-CMiso1.1chr07:20177981..20178312	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196921.1	Cmc07g0196921.1-protein	polypeptide