Cmc07g0196701.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0196701.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ABC transporter G family member 31-like
Location	CMiso1.1chr07: 19866347 .. 19866624 (+)
Sequence length	180
RNA-Seq Expression	Cmc07g0196701.1
Synteny	Cmc07g0196701.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTTTCTTTCAAACCATTAACAATGACTTTTCACAATGTTAGTTATTTTGTTGATACTCCAAAGGTTAGTCTATAAGGTTTAAAAATCATTAACTACGTTCATATGATATGATTATTTGTGTATTTAAGTTCCTTAATTTTCATTTTATTTTTTTATAACAGGAATTGAAAGAAAAAGGATCATCAATAGGAGAAAAGAAGTTGCACTTGTTATCAAATGTGAGTGGTGTCTTTCGTCCTGGTGTTCTAACAGCATTAGTTGGTGCAAGTTAG

mRNA sequence

ATGATTCTTTCTTTCAAACCATTAACAATGACTTTTCACAATGTTAGTTATTTTGTTGATACTCCAAAGGAATTGAAAGAAAAAGGATCATCAATAGGAGAAAAGAAGTTGCACTTGTTATCAAATGTGAGTGGTGTCTTTCGTCCTGGTGTTCTAACAGCATTAGTTGGTGCAAGTTAG

Coding sequence (CDS)

ATGATTCTTTCTTTCAAACCATTAACAATGACTTTTCACAATGTTAGTTATTTTGTTGATACTCCAAAGGAATTGAAAGAAAAAGGATCATCAATAGGAGAAAAGAAGTTGCACTTGTTATCAAATGTGAGTGGTGTCTTTCGTCCTGGTGTTCTAACAGCATTAGTTGGTGCAAGTTAG

Protein sequence

MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS

Homology

[Close]

BLAST of Cmc07g0196701.1 vs. NCBI nr
Match: XP_031739976.1 (LOW QUALITY PROTEIN: ABC transporter G family member 31-like [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-19
Identity = 55/60 (91.67%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEK-GSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL FKPLTMTFHNVSYFVDTPKE+KEK GSSIGEKKL LLSNVSGVF PGVLTALVGAS
Sbjct: 779 MILPFKPLTMTFHNVSYFVDTPKEMKEKAGSSIGEKKLQLLSNVSGVFCPGVLTALVGAS 838

[Close]

BLAST of Cmc07g0196701.1 vs. NCBI nr
Match: TYK16332.1 (ABC transporter G family member 31-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-18
Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL FKPL MTFH+VSYFVDTP E+KE G SIGEKKL LLSNVSGVFRPGVLTALVGAS
Sbjct: 139 MILPFKPLAMTFHDVSYFVDTPGEMKENGLSIGEKKLQLLSNVSGVFRPGVLTALVGAS 197

[Close]

BLAST of Cmc07g0196701.1 vs. NCBI nr
Match: XP_023006793.1 (ABC transporter G family member 31-like [Cucurbita maxima])

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-15
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+YFVDTPKE+K++G  I EKKL LLSNVSGVF PGVLTALVG+S
Sbjct: 806 MILPFQPLTMTFHNVNYFVDTPKEMKQQG--IPEKKLQLLSNVSGVFSPGVLTALVGSS 862

[Close]

BLAST of Cmc07g0196701.1 vs. NCBI nr
Match: XP_023532148.1 (ABC transporter G family member 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-15
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+YFVDTPKE+K++G  I EKKL LLSNVSGVF PGVLTALVG+S
Sbjct: 592 MILPFQPLTMTFHNVNYFVDTPKEMKQQG--IPEKKLQLLSNVSGVFSPGVLTALVGSS 648

[Close]

BLAST of Cmc07g0196701.1 vs. NCBI nr
Match: XP_022948220.1 (ABC transporter G family member 31-like [Cucurbita moschata])

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-15
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+YFVDTPKE+K++G  I EKKL LLSNVSGVF PGVLTALVG+S
Sbjct: 592 MILPFQPLTMTFHNVNYFVDTPKEMKQQG--IPEKKLQLLSNVSGVFSPGVLTALVGSS 648

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy Swiss-Prot
Match: Q7PC88 (ABC transporter G family member 31 OS=Arabidopsis thaliana OX=3702 GN=ABCG31 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.9e-16
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL FKPLTMTFHNV+Y+VD PKE++ +G  + E +L LLSNVSGVF PGVLTALVG+S
Sbjct: 817 MILPFKPLTMTFHNVNYYVDMPKEMRSQG--VPETRLQLLSNVSGVFSPGVLTALVGSS 873

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy Swiss-Prot
Match: Q8S628 (ABC transporter G family member 51 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG51 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.9e-15
Identity = 41/59 (69.49%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+Y+V+ PKE++ KG  + EK+L LLS VSG+FRP VLTALVGAS
Sbjct: 829 MILPFQPLTMTFHNVNYYVNMPKEMQAKG--VPEKRLQLLSEVSGIFRPRVLTALVGAS 885

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy Swiss-Prot
Match: Q94A18 (ABC transporter G family member 29 OS=Arabidopsis thaliana OX=3702 GN=ABCG29 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.0e-13
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           M+L F PLTM+F NV+Y+VD PKE+KE+G  + + KL LL  V+GVFRPGVLTAL+G S
Sbjct: 805 MVLPFTPLTMSFDNVNYYVDMPKEMKEQG--VSKDKLQLLKEVTGVFRPGVLTALMGVS 861

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy Swiss-Prot
Match: Q7PC85 (ABC transporter G family member 38 OS=Arabidopsis thaliana OX=3702 GN=ABCG38 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.0e-13
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 3   LSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           + FKPL MTF N++Y VDTPKE+KEKG  I E KL LL+ +SG FRPGVLTAL+G S
Sbjct: 814 IPFKPLYMTFENITYSVDTPKEMKEKG--IRENKLVLLNGLSGAFRPGVLTALMGVS 868

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy Swiss-Prot
Match: Q9ZUT8 (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.6e-13
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL FKPLT+TF +++Y+VD P E+  KG    EKKL LLS ++G FRPGVLTAL+G S
Sbjct: 804 MILPFKPLTITFQDLNYYVDVPVEM--KGQGYNEKKLQLLSEITGAFRPGVLTALMGIS 860

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy TrEMBL
Match: A0A5D3CXR9 (ABC transporter G family member 31-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001140 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.4e-19
Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL FKPL MTFH+VSYFVDTP E+KE G SIGEKKL LLSNVSGVFRPGVLTALVGAS
Sbjct: 139 MILPFKPLAMTFHDVSYFVDTPGEMKENGLSIGEKKLQLLSNVSGVFRPGVLTALVGAS 197

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy TrEMBL
Match: A0A6J1L5X7 (ABC transporter G family member 31-like OS=Cucurbita maxima OX=3661 GN=LOC111499457 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.1e-16
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+YFVDTPKE+K++G  I EKKL LLSNVSGVF PGVLTALVG+S
Sbjct: 806 MILPFQPLTMTFHNVNYFVDTPKEMKQQG--IPEKKLQLLSNVSGVFSPGVLTALVGSS 862

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy TrEMBL
Match: A0A6J1G971 (ABC transporter G family member 31-like OS=Cucurbita moschata OX=3662 GN=LOC111451861 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.1e-16
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+YFVDTPKE+K++G  I EKKL LLSNVSGVF PGVLTALVG+S
Sbjct: 592 MILPFQPLTMTFHNVNYFVDTPKEMKQQG--IPEKKLQLLSNVSGVFSPGVLTALVGSS 648

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy TrEMBL
Match: A0A6J1FYW1 (ABC transporter G family member 31-like OS=Cucurbita moschata OX=3662 GN=LOC111449097 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+YFVDTPKE++++G  I EKKL LLSNVSGVF PGVLTALVG+S
Sbjct: 828 MILPFQPLTMTFHNVNYFVDTPKEMRQQG--IPEKKLQLLSNVSGVFSPGVLTALVGSS 884

[Close]

BLAST of Cmc07g0196701.1 vs. ExPASy TrEMBL
Match: A0A1Q3DBT4 (ABC_tran domain-containing protein/ABC2_membrane domain-containing protein/PDR_assoc domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33322 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-15
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL F+PLTMTFHNV+YFVD PKE+K KG  I EK+L LLSNVSGVF PGVLTALVG+S
Sbjct: 826 MILPFQPLTMTFHNVNYFVDMPKEMKSKG--ISEKRLQLLSNVSGVFSPGVLTALVGSS 882

[Close]

BLAST of Cmc07g0196701.1 vs. TAIR 10
Match: AT2G29940.1 (pleiotropic drug resistance 3 )

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-17
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL FKPLTMTFHNV+Y+VD PKE++ +G  + E +L LLSNVSGVF PGVLTALVG+S
Sbjct: 817 MILPFKPLTMTFHNVNYYVDMPKEMRSQG--VPETRLQLLSNVSGVFSPGVLTALVGSS 873

[Close]

BLAST of Cmc07g0196701.1 vs. TAIR 10
Match: AT3G16340.1 (pleiotropic drug resistance 1 )

HSP 1 Score: 76.6 bits (187), Expect = 7.3e-15
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           M+L F PLTM+F NV+Y+VD PKE+KE+G  + + KL LL  V+GVFRPGVLTAL+G S
Sbjct: 805 MVLPFTPLTMSFDNVNYYVDMPKEMKEQG--VSKDKLQLLKEVTGVFRPGVLTALMGVS 861

[Close]

BLAST of Cmc07g0196701.1 vs. TAIR 10
Match: AT3G16340.2 (pleiotropic drug resistance 1 )

HSP 1 Score: 76.6 bits (187), Expect = 7.3e-15
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           M+L F PLTM+F NV+Y+VD PKE+KE+G  + + KL LL  V+GVFRPGVLTAL+G S
Sbjct: 800 MVLPFTPLTMSFDNVNYYVDMPKEMKEQG--VSKDKLQLLKEVTGVFRPGVLTALMGVS 856

[Close]

BLAST of Cmc07g0196701.1 vs. TAIR 10
Match: AT3G30842.1 (pleiotropic drug resistance 10 )

HSP 1 Score: 75.1 bits (183), Expect = 2.1e-14
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 3   LSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           + FKPL MTF N++Y VDTPKE+KEKG  I E KL LL+ +SG FRPGVLTAL+G S
Sbjct: 807 IPFKPLYMTFENITYSVDTPKEMKEKG--IRENKLVLLNGLSGAFRPGVLTALMGVS 861

[Close]

BLAST of Cmc07g0196701.1 vs. TAIR 10
Match: AT2G37280.1 (pleiotropic drug resistance 5 )

HSP 1 Score: 73.6 bits (179), Expect = 6.1e-14
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 1   MILSFKPLTMTFHNVSYFVDTPKELKEKGSSIGEKKLHLLSNVSGVFRPGVLTALVGAS 60
           MIL FKPLT+TF +++Y+VD P E+  KG    EKKL LLS ++G FRPGVLTAL+G S
Sbjct: 804 MILPFKPLTITFQDLNYYVDVPVEM--KGQGYNEKKLQLLSEITGAFRPGVLTALMGIS 860

The following BLAST results are available for this feature:

BLAST of Cmc07g0196701.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739976.1	2.0e-19	91.67	LOW QUALITY PROTEIN: ABC transporter G family member 31-like [Cucumis sativus]	[more]
TYK16332.1	1.7e-18	86.44	ABC transporter G family member 31-like isoform X2 [Cucumis melo var. makuwa]	[more]
XP_023006793.1	1.1e-15	79.66	ABC transporter G family member 31-like [Cucurbita maxima]	[more]
XP_023532148.1	1.1e-15	79.66	ABC transporter G family member 31-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948220.1	1.1e-15	79.66	ABC transporter G family member 31-like [Cucurbita moschata]	[more]

BLAST of Cmc07g0196701.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7PC88	2.9e-16	71.19	ABC transporter G family member 31 OS=Arabidopsis thaliana OX=3702 GN=ABCG31 PE=...	[more]
Q8S628	1.9e-15	69.49	ABC transporter G family member 51 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]
Q94A18	1.0e-13	62.71	ABC transporter G family member 29 OS=Arabidopsis thaliana OX=3702 GN=ABCG29 PE=...	[more]
Q7PC85	3.0e-13	66.67	ABC transporter G family member 38 OS=Arabidopsis thaliana OX=3702 GN=ABCG38 PE=...	[more]
Q9ZUT8	8.6e-13	61.02	ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=...	[more]

BLAST of Cmc07g0196701.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXR9	8.4e-19	86.44	ABC transporter G family member 31-like isoform X2 OS=Cucumis melo var. makuwa O...	[more]
A0A6J1L5X7	5.1e-16	79.66	ABC transporter G family member 31-like OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A6J1G971	5.1e-16	79.66	ABC transporter G family member 31-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1FYW1	1.1e-15	77.97	ABC transporter G family member 31-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A1Q3DBT4	1.9e-15	77.97	ABC_tran domain-containing protein/ABC2_membrane domain-containing protein/PDR_a...	[more]

BLAST of Cmc07g0196701.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29940.1	2.0e-17	71.19	pleiotropic drug resistance 3	[more]
AT3G16340.1	7.3e-15	62.71	pleiotropic drug resistance 1	[more]
AT3G16340.2	7.3e-15	62.71	pleiotropic drug resistance 1	[more]
AT3G30842.1	2.1e-14	66.67	pleiotropic drug resistance 10	[more]
AT2G37280.1	6.1e-14	61.02	pleiotropic drug resistance 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48040:SF13	LOW QUALITY PROTEIN: ABC TRANSPORTER G FAMILY MEMBER 31-LIKE	coord: 1..59
None	No IPR available	PANTHER	PTHR48040	PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1	coord: 1..59

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0196701	Cmc07g0196701	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196701.1-exon	Cmc07g0196701.1-exon-CMiso1.1chr07:19866347..19866415	exon
Cmc07g0196701.1-exon	Cmc07g0196701.1-exon-CMiso1.1chr07:19866514..19866624	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196701.1-cds	Cmc07g0196701.1-cds-CMiso1.1chr07:19866347..19866415	CDS
Cmc07g0196701.1-cds	Cmc07g0196701.1-cds-CMiso1.1chr07:19866514..19866624	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196701.1	Cmc07g0196701.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding