Cmc07g0196691.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0196691.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr07: 19855547 .. 19855948 (+)
Sequence length	402
RNA-Seq Expression	Cmc07g0196691.1
Synteny	Cmc07g0196691.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATTTGAGAAATGCTCAATATGTTCTTGGTATCCAAATAGTTCAGAATCGAAAGAACAAAACACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTTCAAAAAGGGTATGTTGCCGTACAGATATGGAATTCATTTCTCAAAAGAACAATGTCTAAAAACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTTTATTGTTGGGAGCCTGATGTATGCAATGTTATGTACTGGACTTGACATTTGCTATTCAGTAGGGATAGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAACCGTTAAAAATATTCTAAAATATCTTAGAAAAACAAAAGACTACATGCTAGTATAA

mRNA sequence

ATGAAAGATTTGAGAAATGCTCAATATGTTCTTGGTATCCAAATAGTTCAGAATCGAAAGAACAAAACACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTTCAAAAAGGGTATGTTGCCGTACAGATATGGAATTCATTTCTCAAAAGAACAATGTCTAAAAACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTTTATTGTTGGGAGCCTGATGTATGCAATGTTATGTACTGGACTTGACATTTGCTATTCAGTAGGGATAGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAACCGTTAAAAATATTCTAAAATATCTTAGAAAAACAAAAGACTACATGCTAGTATAA

Coding sequence (CDS)

ATGAAAGATTTGAGAAATGCTCAATATGTTCTTGGTATCCAAATAGTTCAGAATCGAAAGAACAAAACACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTTCAAAAAGGGTATGTTGCCGTACAGATATGGAATTCATTTCTCAAAAGAACAATGTCTAAAAACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTTTATTGTTGGGAGCCTGATGTATGCAATGTTATGTACTGGACTTGACATTTGCTATTCAGTAGGGATAGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAACCGTTAAAAATATTCTAAAATATCTTAGAAAAACAAAAGACTACATGCTAGTATAA

Protein sequence

MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKEQCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNILKYLRKTKDYMLV

Homology

[Close]

BLAST of Cmc07g0196691.1 vs. NCBI nr
Match: TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60
Identity = 118/133 (88.72%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGIQIV+N KNKTLAMSQTSYIDKMLSRYKMQN KKG+LPYRYGIH SKE
Sbjct: 97  MKDLGNAQYVLGIQIVRNGKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKE 156

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEVEDMSNIPYA  +GSLMYAMLCT +DICYSVGIV+RYQSNPGRDHWT VKNI
Sbjct: 157 QCPKTPQEVEDMSNIPYASAIGSLMYAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNI 216

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+TKDYMLV
Sbjct: 217 LKYLRRTKDYMLV 229

[Close]

BLAST of Cmc07g0196691.1 vs. NCBI nr
Match: KAA0050132.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 7.0e-60
Identity = 117/133 (87.97%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGIQIV+NRKNKTLAMSQTSY+DKMLSRYKMQNFKK +L YRYGIH SKE
Sbjct: 48  MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYMDKMLSRYKMQNFKKALLSYRYGIHLSKE 107

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEVEDMSNI YA+ VGSLMYAMLCT  DICYSVGIVSRYQSNPGRDHWT +KNI
Sbjct: 108 QCPKTPQEVEDMSNISYAYAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAIKNI 167

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+TKDYMLV
Sbjct: 168 LKYLRRTKDYMLV 180

[Close]

BLAST of Cmc07g0196691.1 vs. NCBI nr
Match: TYK03131.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 9.2e-60
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQN +KG+LPY+YGIH SKE
Sbjct: 241 MKDLENAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSRKGLLPYKYGIHLSKE 300

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           Q  KTPQEVEDMSNIPYA IVGSLMYAMLCT  DICYSVGIVSRYQSN GRDHWTTVKNI
Sbjct: 301 QYPKTPQEVEDMSNIPYASIVGSLMYAMLCTIPDICYSVGIVSRYQSNSGRDHWTTVKNI 360

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+T+DYMLV
Sbjct: 361 LKYLRRTRDYMLV 373

[Close]

BLAST of Cmc07g0196691.1 vs. NCBI nr
Match: KAA0052272.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 117/133 (87.97%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGI+IV+NRKNKTLAMSQTSYIDKMLSRYKMQN KK +LPYRYGIH SKE
Sbjct: 331 MKDLENAQYVLGIEIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKSLLPYRYGIHLSKE 390

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEV+DMSNIPYA  VGSLMYAMLCT  DICYSVGIVSRYQSNPG DHWT VKNI
Sbjct: 391 QCPKTPQEVKDMSNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGSDHWTAVKNI 450

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+TKDYMLV
Sbjct: 451 LKYLRRTKDYMLV 463

[Close]

BLAST of Cmc07g0196691.1 vs. NCBI nr
Match: KAA0033208.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK07508.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 7.8e-59
Identity = 117/133 (87.97%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLG Q V NRKNKTLAMSQTSYIDKMLS+YKMQNFKK + PY YGIH SKE
Sbjct: 333 MKDLENAQYVLGTQTVWNRKNKTLAMSQTSYIDKMLSKYKMQNFKKSLQPYIYGIHLSKE 392

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEVEDMSNIPYA +VGSLMYAMLCT  DICYSVGIVSRYQSNPG DHWTTVKNI
Sbjct: 393 QCPKTPQEVEDMSNIPYASVVGSLMYAMLCTRPDICYSVGIVSRYQSNPGCDHWTTVKNI 452

Query: 121 LKYLRKTKDYMLV 134
           LKYLRKTKDYMLV
Sbjct: 453 LKYLRKTKDYMLV 465

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-27
Identity = 60/127 (47.24%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
            MKDL  AQ +LG++IV+ R ++ L +SQ  YI+++L R+ M+N K    P    +  SK+
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

Query: 61   QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
             C  T +E  +M+ +PY+  VGSLMYAM+CT  DI ++VG+VSR+  NPG++HW  VK I
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154

Query: 121  LKYLRKT 128
            L+YLR T
Sbjct: 1155 LRYLRGT 1161

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-12
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHF--- 60
            M DL   ++ +GI+I    +   + +SQ++Y+ K+LS++ M+N      P    I++   
Sbjct: 1114 MTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELL 1173

Query: 61   -SKEQCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTT 120
             S E C           N P   ++G LMY MLCT  D+  +V I+SRY S    + W  
Sbjct: 1174 NSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQN 1233

Query: 121  VKNILKYLRKTKDYMLV 134
            +K +L+YL+ T D  L+
Sbjct: 1234 LKRVLRYLKGTIDMKLI 1237

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 25/61 (40.98%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 72  MSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNILKYLRKTKDYM 131
           M N+PY   VG++MY M+ T  D+  +VG++S++ S+P   HW  +K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 132 L 133
           L
Sbjct: 61  L 61

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.2e-07
Identity = 41/130 (31.54%), Postives = 59/130 (45.38%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
            +K+  +  Y LGI+    R  + L +SQ  Y   +L+R  M   K    P       +  
Sbjct: 1160 VKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1219

Query: 61   QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
               K P   E      Y  IVGSL Y +  T  D+ Y+V  +S+Y   P  DHW  +K +
Sbjct: 1220 SGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1279

Query: 121  LKYLRKTKDY 131
            L+YL  T D+
Sbjct: 1280 LRYLAGTPDH 1280

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.7e-04
Identity = 41/130 (31.54%), Postives = 56/130 (43.08%), Query Frame = 0


Query: 1    MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
            +KD     Y LGI+    R    L +SQ  YI  +L+R  M   K    P       S  
Sbjct: 1177 VKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLY 1236

Query: 61   QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
               K     E      Y  IVGSL Y +  T  DI Y+V  +S++   P  +H   +K I
Sbjct: 1237 SGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRI 1296

Query: 121  LKYLRKTKDY 131
            L+YL  T ++
Sbjct: 1297 LRYLAGTPNH 1297

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy TrEMBL
Match: A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.9e-61
Identity = 118/133 (88.72%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGIQIV+N KNKTLAMSQTSYIDKMLSRYKMQN KKG+LPYRYGIH SKE
Sbjct: 97  MKDLGNAQYVLGIQIVRNGKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKE 156

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEVEDMSNIPYA  +GSLMYAMLCT +DICYSVGIV+RYQSNPGRDHWT VKNI
Sbjct: 157 QCPKTPQEVEDMSNIPYASAIGSLMYAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNI 216

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+TKDYMLV
Sbjct: 217 LKYLRRTKDYMLV 229

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy TrEMBL
Match: A0A5A7U2R8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001560 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.4e-60
Identity = 117/133 (87.97%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGIQIV+NRKNKTLAMSQTSY+DKMLSRYKMQNFKK +L YRYGIH SKE
Sbjct: 48  MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYMDKMLSRYKMQNFKKALLSYRYGIHLSKE 107

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEVEDMSNI YA+ VGSLMYAMLCT  DICYSVGIVSRYQSNPGRDHWT +KNI
Sbjct: 108 QCPKTPQEVEDMSNISYAYAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAIKNI 167

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+TKDYMLV
Sbjct: 168 LKYLRRTKDYMLV 180

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy TrEMBL
Match: A0A5D3BTT3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00060 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.4e-60
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQN +KG+LPY+YGIH SKE
Sbjct: 241 MKDLENAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNSRKGLLPYKYGIHLSKE 300

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           Q  KTPQEVEDMSNIPYA IVGSLMYAMLCT  DICYSVGIVSRYQSN GRDHWTTVKNI
Sbjct: 301 QYPKTPQEVEDMSNIPYASIVGSLMYAMLCTIPDICYSVGIVSRYQSNSGRDHWTTVKNI 360

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+T+DYMLV
Sbjct: 361 LKYLRRTRDYMLV 373

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy TrEMBL
Match: A0A5A7U945 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001000 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.9e-60
Identity = 117/133 (87.97%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLGI+IV+NRKNKTLAMSQTSYIDKMLSRYKMQN KK +LPYRYGIH SKE
Sbjct: 331 MKDLENAQYVLGIEIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKSLLPYRYGIHLSKE 390

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEV+DMSNIPYA  VGSLMYAMLCT  DICYSVGIVSRYQSNPG DHWT VKNI
Sbjct: 391 QCPKTPQEVKDMSNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGSDHWTAVKNI 450

Query: 121 LKYLRKTKDYMLV 134
           LKYLR+TKDYMLV
Sbjct: 451 LKYLRRTKDYMLV 463

[Close]

BLAST of Cmc07g0196691.1 vs. ExPASy TrEMBL
Match: A0A5A7SRP3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00260 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.8e-59
Identity = 117/133 (87.97%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MKDLRNAQYVLGIQIVQNRKNKTLAMSQTSYIDKMLSRYKMQNFKKGMLPYRYGIHFSKE 60
           MKDL NAQYVLG Q V NRKNKTLAMSQTSYIDKMLS+YKMQNFKK + PY YGIH SKE
Sbjct: 333 MKDLENAQYVLGTQTVWNRKNKTLAMSQTSYIDKMLSKYKMQNFKKSLQPYIYGIHLSKE 392

Query: 61  QCLKTPQEVEDMSNIPYAFIVGSLMYAMLCTGLDICYSVGIVSRYQSNPGRDHWTTVKNI 120
           QC KTPQEVEDMSNIPYA +VGSLMYAMLCT  DICYSVGIVSRYQSNPG DHWTTVKNI
Sbjct: 393 QCPKTPQEVEDMSNIPYASVVGSLMYAMLCTRPDICYSVGIVSRYQSNPGCDHWTTVKNI 452

Query: 121 LKYLRKTKDYMLV 134
           LKYLRKTKDYMLV
Sbjct: 453 LKYLRKTKDYMLV 465

The following BLAST results are available for this feature:

BLAST of Cmc07g0196691.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11050.1	1.4e-60	88.72	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0050132.1	7.0e-60	87.97	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK03131.1	9.2e-60	89.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0052272.1	2.0e-59	87.97	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0033208.1	7.8e-59	87.97	gag/pol protein [Cucumis melo var. makuwa] >TYK07508.1 gag/pol protein [Cucumis ...	[more]

BLAST of Cmc07g0196691.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.8e-27	47.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.3e-12	32.12	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	1.7e-08	40.98	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q9ZT94	7.2e-07	31.54	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	5.7e-04	31.54	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc07g0196691.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CI71	6.9e-61	88.72	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330...	[more]
A0A5A7U2R8	3.4e-60	87.97	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G0015...	[more]
A0A5D3BTT3	4.4e-60	89.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00060...	[more]
A0A5A7U945	9.9e-60	87.97	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G0010...	[more]
A0A5A7SRP3	3.8e-59	87.97	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G002...	[more]

BLAST of Cmc07g0196691.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0196691	Cmc07g0196691	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196691.1-exon	Cmc07g0196691.1-exon-CMiso1.1chr07:19855547..19855948	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196691.1-cds	Cmc07g0196691.1-cds-CMiso1.1chr07:19855547..19855948	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0196691.1	Cmc07g0196691.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding