Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. TTTACAAAAAAGAGCAGTGAAAAAAACTTCAATTTCAAAAGTTTCCCCGAATTTACAGAAAGAGCATCAGTCGTCTTCTTCAACGAAATCTTCTTCAAAATCTTCATCGTCTTCTTCATCAAAAGAGAACCGATCACCTCTACAAAAATCTTCTTAAAAAAATCCTCTTCATCGGAAGGTGGATAGCTTCGCCTTCTACAGAAACAAGGTCTGTTATGCTCATTCTTCTTTTGTTCCTCTTCAGTTCCTGCAACTTAGTGAAATTGATGGTTAGTAACAAAACCCATTCAGGGATCTCCTCCATCTCCAGAACTACTCCAAAGATTAGGAAAAAAAATGTCGTGGAGTGTAGAAAGTATATAAAGGATACATTTTTTAATCTAAATTTTTTATTTTATTTTTCAATTATTGTTTTAAAATACATTAACAAATATTAAAAGATCTTCCCTTAATTTATAGGAACAACAACTGTAATAGAAATTCTTTTAATATTTATAAACGTTCATTCAATTAATAATTTGTAGCAACATTAAAAGATGAAAAAAGAGAAGGGTGAAAGAAGAACAAGAGTGAGCAACATATTAACGATTGCTGCAATTACTGGTTCGAAGAACCCATCAACCAAAGAACCAAAAACTTTGTCAAGTTCAAACGAGGTATACATCTAAATACTATTTTAAATGTGACAAAACTTCTAATCTAGTTGTATGCCAATATTCCTTTAAAAATAAACAAATATTAGAAGACAATATATAAACAATGAAGACATCACTACAATATTTATACAATCAAAATAATTCCAAATATGCATAATTTGCATTGTTAACTTCTTATATGCATATCTACAATAGAGACCAGAAGATCCAATGTTTGTAGGCTTTGGTAGCAAGCGTGGCAGTCCTAAAACTTCAAAGAAGAGGGAAATGAATGAACCTCTAAAAGAAGAGAATGTTGTATAGAAAAAACCAAGGACAAAAAACTTGGTAATTCATATTTTTTTTATCTGATTTTTTAAGCAATACAATCTAAATTGTAACCCAAAACGAACATTTGTAGGCTAGCAAAAGGAAATTTGTGAAACTAACGAATGAAGAGCAAGAGGAAGAACCCCAAGTAGATGAGAATGTATAGTATCTACATTGTTCTACTCCAATTAATAAAGTATAATGGTACATTAATAATAGAAACATTAACCAATCAATATTAATGAACAGACTGAAAGTGAAGATGATAAATGAGAAGAAGAAGACCAACATGAAGGAGTAGATGAAACAGAGGATAATGAAGAACATAGTTCAAAAACAAAAAACATAACGACAACAAAGGAAGAATCAATAGATAACAATACAAGAAGAAAGGATATAGAGGAGGAAGAGAAGGTAACAATCTATCACTTTTAATACATAAAAAAGGTTTTATAGAATATATCAATCAA mRNA sequence TTTACAAAAAAGAGCAGTGAAAAAAACTTCAATTTCAAAAGTTTCCCCGAATTTACAGAAAGAGCATCAGTCGTCTTCTTCAACGAAATCTTCTTCAAAATCTTCATCGTCTTCTTCATCAAAAGAGAACCGATCACCTCTACAAAAATCTTCTTAAAAAAATCCTCTTCATCGGAAGGTGGATAGCTTCGCCTTCTACAGAAACAAGCAACATTAAAAGATGAAAAAAGAGAAGGGTGAAAGAAGAACAAGAGTGAGCAACATATTAACGATTGCTGCAATTACTGGTTCGAAGAACCCATCAACCAAAGAACCAAAAACTTTGTCAAGTTCAAACGAGACTGAAAGTGAAGATGATAAATGAGAAGAAGAAGACCAACATGAAGGAGTAGATGAAACAGAGGATAATGAAGAACATAGTTCAAAAACAAAAAACATAACGACAACAAAGGAAGAATCAATAGATAACAATACAAGAAGAAAGGATATAGAGGAGGAAGAGAAGGTAACAATCTATCACTTTTAATACATAAAAAAGGTTTTATAGAATATATCAATCAA Coding sequence (CDS) ATGAAAAAAGAGAAGGGTGAAAGAAGAACAAGAGTGAGCAACATATTAACGATTGCTGCAATTACTGGTTCGAAGAACCCATCAACCAAAGAACCAAAAACTTTGTCAAGTTCAAACGAGACTGAAAGTGAAGATGATAAATGA Protein sequence MKKEKGERRTRVSNILTIAAITGSKNPSTKEPKTLSSSNETESEDDK
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 15..36 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..47 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc07g0192021.1-exon | Cmc07g0192021.1-exon-CMiso1.1chr07:12422141..12422348 | exon |
| Cmc07g0192021.1-exon | Cmc07g0192021.1-exon-CMiso1.1chr07:12422665..12422796 | exon |
| Cmc07g0192021.1-exon | Cmc07g0192021.1-exon-CMiso1.1chr07:12423355..12423575 | exon |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc07g0192021.1-five_prime_utr | Cmc07g0192021.1-five_prime_utr-CMiso1.1chr07:12422141..12422348 | five_prime_UTR |
| Cmc07g0192021.1-five_prime_utr | Cmc07g0192021.1-five_prime_utr-CMiso1.1chr07:12422665..12422676 | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc07g0192021.1-cds | Cmc07g0192021.1-cds-CMiso1.1chr07:12422677..12422796 | CDS |
| Cmc07g0192021.1-cds | Cmc07g0192021.1-cds-CMiso1.1chr07:12423355..12423378 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc07g0192021.1-three_prime_utr | Cmc07g0192021.1-three_prime_utr-CMiso1.1chr07:12423379..12423575 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc07g0192021.1 | Cmc07g0192021.1-protein | polypeptide |
|
