Cmc07g0191531.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0191531.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 11337351 .. 11338316 (-)
Sequence length	966
RNA-Seq Expression	Cmc07g0191531.1
Synteny	Cmc07g0191531.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGACTCCGGTGCCACCCACAATTTCATAACAGAAGCAGAAGCTAAGCGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGTCGTGAATTCTGCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTACTGGGAATGGAGTTCTTACTCGAACATCAGGTAATTCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGATCTACCCTCTCTATTGTACAGACTGACCTACGCCAGCCAGATGGGTTAAAAATGATCTCGGCCATGAAATTGAAGAAGGGTCTCTCTCGAGACGAACCAACGTTTATGGCCATCCCACTCAATTCGTTAGAGAACTCAAGGAAGACAGTCCCTAAAGAGATTATGCGCGTGCTAGAGAAGTATCATGATATGATGCTCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTAGTGCCAGGGGCAAAACCGTCTGCGAAGAATGCTTATCGTATGGTGCCTCTAGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTTAATGCAGGGTTCATTAGGCTTGCAAAAGCTCTGTACGGGGCCCCAGTTCTTTTCCAGAAGAAGAAGGATGGGGGTTTACGATTGTGCATTAATTATCGTGCCTTGAATAAGCTCACGATTCGCAATAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATTGGGCAAAGTATTTTTCAAAGTTGGACTTGCGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTGACCCGATATGGTGTGTTCGAATTCCTCGTAATGCAATTTGGTCTCACCAATGCCCTGCAACCTTCTGTACGTTGA

mRNA sequence

ATGGTTGACTCCGGTGCCACCCACAATTTCATAACAGAAGCAGAAGCTAAGCGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGTCGTGAATTCTGCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTACTGGGAATGGAGTTCTTACTCGAACATCAGGTAATTCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGATCTACCCTCTCTATTGTACAGACTGACCTACGCCAGCCAGATGGGTTAAAAATGATCTCGGCCATGAAATTGAAGAAGGGTCTCTCTCGAGACGAACCAACGTTTATGGCCATCCCACTCAATTCGTTAGAGAACTCAAGGAAGACAGTCCCTAAAGAGATTATGCGCGTGCTAGAGAAGTATCATGATATGATGCTCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTAGTGCCAGGGGCAAAACCGTCTGCGAAGAATGCTTATCGTATGGTGCCTCTAGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTTAATGCAGGGTTCATTAGGCTTGCAAAAGCTCTGTACGGGGCCCCAGTTCTTTTCCAGAAGAAGAAGGATGGGGGTTTACGATTGTGCATTAATTATCGTGCCTTGAATAAGCTCACGATTCGCAATAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATTGGGCAAAGTATTTTTCAAAGTTGGACTTGCGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTGACCCGATATGGTGTGTTCGAATTCCTCGTAATGCAATTTGGTCTCACCAATGCCCTGCAACCTTCTGTACGTTGA

Coding sequence (CDS)

ATGGTTGACTCCGGTGCCACCCACAATTTCATAACAGAAGCAGAAGCTAAGCGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGTCGTGAATTCTGCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTACTGGGAATGGAGTTCTTACTCGAACATCAGGTAATTCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGATCTACCCTCTCTATTGTACAGACTGACCTACGCCAGCCAGATGGGTTAAAAATGATCTCGGCCATGAAATTGAAGAAGGGTCTCTCTCGAGACGAACCAACGTTTATGGCCATCCCACTCAATTCGTTAGAGAACTCAAGGAAGACAGTCCCTAAAGAGATTATGCGCGTGCTAGAGAAGTATCATGATATGATGCTCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTAGTGCCAGGGGCAAAACCGTCTGCGAAGAATGCTTATCGTATGGTGCCTCTAGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTTAATGCAGGGTTCATTAGGCTTGCAAAAGCTCTGTACGGGGCCCCAGTTCTTTTCCAGAAGAAGAAGGATGGGGGTTTACGATTGTGCATTAATTATCGTGCCTTGAATAAGCTCACGATTCGCAATAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATTGGGCAAAGTATTTTTCAAAGTTGGACTTGCGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTGACCCGATATGGTGTGTTCGAATTCCTCGTAATGCAATTTGGTCTCACCAATGCCCTGCAACCTTCTGTACGTTGA

Protein sequence

MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLKKGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIELVPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCINYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGVFEFLVMQFGLTNALQPSVR

Homology

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BLAST of Cmc07g0191531.1 vs. NCBI nr
Match: KAA0048703.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 639.0 bits (1647), Expect = 2.1e-179
Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 244 MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 303

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK
Sbjct: 304 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 363

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL
Sbjct: 364 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 423

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI
Sbjct: 424 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 483

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 484 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 543

Query: 301 GVFEFLVMQFGLTNALQPSVR 322
           GVFEFLVMQFGLTNALQPSV+
Sbjct: 544 GVFEFLVMQFGLTNALQPSVQ 564

[Close]

BLAST of Cmc07g0191531.1 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 580.1 bits (1494), Expect = 1.2e-161
Identity = 292/315 (92.70%), Postives = 299/315 (94.92%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITEAEAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 451 MVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDF 510

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 511 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 570

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPLNS ENS +TVPKEI+RVLEKY D+M DSLPKSLPPRRMIDHEIEL
Sbjct: 571 KGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIEL 630

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQKKKDG LRLCI
Sbjct: 631 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCI 690

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIITDLFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 691 DYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 750

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 751 GAFEFLVMPFGLTNA 765

[Close]

BLAST of Cmc07g0191531.1 vs. NCBI nr
Match: KAA0052270.1 (uncharacterized protein E6C27_scaffold207G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 577.4 bits (1487), Expect = 7.6e-161
Identity = 291/315 (92.38%), Postives = 300/315 (95.24%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLG WSGLVDF
Sbjct: 205 MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGEWSGLVDF 264

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 265 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 324

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPLNS ENSR+TVPKEI+RVLEKY D+M DSLPKSLPP+RMIDHEIEL
Sbjct: 325 KGLSRDEPTFMAIPLNSSENSRETVPKEIVRVLEKYRDVMPDSLPKSLPPQRMIDHEIEL 384

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQKKKDG LRLCI
Sbjct: 385 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCI 444

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIIT+LFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 445 HYRALNKLTVRNKYPLPIITNLFDRLHRAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 504

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 505 GAFEFLVMPFGLTNA 519

[Close]

BLAST of Cmc07g0191531.1 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 576.6 bits (1485), Expect = 1.3e-160
Identity = 290/315 (92.06%), Postives = 297/315 (94.29%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 477 MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDF 536

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 537 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 596

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPL S ENS +TVPKEIMRVLEKY D+M DSLPKSLPPRRMIDHEIEL
Sbjct: 597 KGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIEL 656

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQ+KKDG LRLCI
Sbjct: 657 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCI 716

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIITDLFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 717 DYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 776

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 777 GAFEFLVMPFGLTNA 791

[Close]

BLAST of Cmc07g0191531.1 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 576.6 bits (1485), Expect = 1.3e-160
Identity = 290/315 (92.06%), Postives = 297/315 (94.29%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 481 MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDF 540

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 541 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 600

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPL S ENS +TVPKEIMRVLEKY D+M DSLPKSLPPRRMIDHEIEL
Sbjct: 601 KGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIEL 660

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQ+KKDG LRLCI
Sbjct: 661 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCI 720

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIITDLFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 721 DYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 780

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 781 GAFEFLVMPFGLTNA 795

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-30
Identity = 62/81 (76.54%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 236 LRLCINYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTT 295
           LR+CI+YRAL K+TI+NKYP+P + DLFDRL  A +F+KLDLRSGY+QVRIA+GDEPKTT
Sbjct: 6   LRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTT 65

Query: 296 CVTRYGVFEFLVMQFGLTNAL 317
           CVTRYG FEF VM FGLTNAL
Sbjct: 66  CVTRYGSFEFRVMPFGLTNAL 86

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 119.0 bits (297), Expect = 9.8e-26
Identity = 70/197 (35.53%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 129 TFMAIPLNSLENSRK----TVPKEIMRVLEKYHDMMLDSLP------KSLPPRRMIDHEI 188
           T  ++  N+ ++S K    T+P   + + +KY +++ + LP       ++P    + H+I
Sbjct: 536 TIQSVEPNATDHSNKDTFCTLP---VWLQQKYREIIRNDLPPRPADINNIP----VKHDI 595

Query: 189 ELVPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRL 248
           E+ PGA+      Y +      E+ K + +LL+  FI  +K+   +PV+   KKDG  RL
Sbjct: 596 EIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRL 655

Query: 249 CINYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVT 308
           C++YR LNK TI + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT
Sbjct: 656 CVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVT 715

Query: 309 RYGVFEFLVMQFGLTNA 316
             G +E+ VM FGL NA
Sbjct: 716 PSGKYEYTVMPFGLVNA 725

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 9.8e-26
Identity = 70/197 (35.53%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 129 TFMAIPLNSLENSRK----TVPKEIMRVLEKYHDMMLDSLP------KSLPPRRMIDHEI 188
           T  ++  N+ ++S K    T+P   + + +KY +++ + LP       ++P    + H+I
Sbjct: 562 TIQSVEPNATDHSNKDTFCTLP---VWLQQKYREIIRNDLPPRPADINNIP----VKHDI 621

Query: 189 ELVPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRL 248
           E+ PGA+      Y +      E+ K + +LL+  FI  +K+   +PV+   KKDG  RL
Sbjct: 622 EIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRL 681

Query: 249 CINYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVT 308
           C++YR LNK TI + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT
Sbjct: 682 CVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVT 741

Query: 309 RYGVFEFLVMQFGLTNA 316
             G +E+ VM FGL NA
Sbjct: 742 PSGKYEYTVMPFGLVNA 751

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.0e-23
Identity = 56/169 (33.14%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 148 EIMRVLEKYHDMMLDSLPKSLP-PRRMIDHEIELVPGAKPSAKNAYRMVPLELAELRKQL 207
           E+  + +++ D+  ++  + LP P + ++ E+EL           Y + P ++  +  ++
Sbjct: 373 ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEI 432

Query: 208 DELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCINYRALNKLTIRNKYPLPIITDLFDRL 267
           ++ L +G IR +KA+   PV+F  KK+G LR+ ++Y+ LNK    N YPLP+I  L  ++
Sbjct: 433 NQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKI 492

Query: 268 HWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGVFEFLVMQFGLTNA 316
             +  F+KLDL+S Y+ +R+ +GDE K       GVFE+LVM +G++ A
Sbjct: 493 QGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTA 541

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.0e-23
Identity = 56/169 (33.14%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 148 EIMRVLEKYHDMMLDSLPKSLP-PRRMIDHEIELVPGAKPSAKNAYRMVPLELAELRKQL 207
           E+  + +++ D+  ++  + LP P + ++ E+EL           Y + P ++  +  ++
Sbjct: 373 ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEI 432

Query: 208 DELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCINYRALNKLTIRNKYPLPIITDLFDRL 267
           ++ L +G IR +KA+   PV+F  KK+G LR+ ++Y+ LNK    N YPLP+I  L  ++
Sbjct: 433 NQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKI 492

Query: 268 HWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGVFEFLVMQFGLTNA 316
             +  F+KLDL+S Y+ +R+ +GDE K       GVFE+LVM +G++ A
Sbjct: 493 QGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTA 541

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy TrEMBL
Match: A0A5A7TYN4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00250 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.0e-179
Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 244 MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 303

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK
Sbjct: 304 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 363

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL
Sbjct: 364 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 423

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI
Sbjct: 424 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 483

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 484 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 543

Query: 301 GVFEFLVMQFGLTNALQPSVR 322
           GVFEFLVMQFGLTNALQPSV+
Sbjct: 544 GVFEFLVMQFGLTNALQPSVQ 564

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 5.7e-162
Identity = 292/315 (92.70%), Postives = 299/315 (94.92%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITEAEAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 451 MVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDF 510

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 511 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 570

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPLNS ENS +TVPKEI+RVLEKY D+M DSLPKSLPPRRMIDHEIEL
Sbjct: 571 KGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIEL 630

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQKKKDG LRLCI
Sbjct: 631 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCI 690

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIITDLFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 691 DYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 750

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 751 GAFEFLVMPFGLTNA 765

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy TrEMBL
Match: A0A5A7UAP7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00960 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.7e-161
Identity = 291/315 (92.38%), Postives = 300/315 (95.24%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLG WSGLVDF
Sbjct: 205 MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGEWSGLVDF 264

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 265 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 324

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPLNS ENSR+TVPKEI+RVLEKY D+M DSLPKSLPP+RMIDHEIEL
Sbjct: 325 KGLSRDEPTFMAIPLNSSENSRETVPKEIVRVLEKYRDVMPDSLPKSLPPQRMIDHEIEL 384

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQKKKDG LRLCI
Sbjct: 385 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCI 444

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIIT+LFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 445 HYRALNKLTVRNKYPLPIITNLFDRLHRAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 504

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 505 GAFEFLVMPFGLTNA 519

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.3e-161
Identity = 290/315 (92.06%), Postives = 297/315 (94.29%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 481 MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDF 540

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 541 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 600

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPL S ENS +TVPKEIMRVLEKY D+M DSLPKSLPPRRMIDHEIEL
Sbjct: 601 KGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIEL 660

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQ+KKDG LRLCI
Sbjct: 661 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCI 720

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIITDLFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 721 DYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 780

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 781 GAFEFLVMPFGLTNA 795

[Close]

BLAST of Cmc07g0191531.1 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.3e-161
Identity = 290/315 (92.06%), Postives = 297/315 (94.29%), Query Frame = 0


Query: 1   MVDSGATHNFITEAEAKRLNLRWEKDAGRMKVVNSAALPIIGLVKRTMIRLGGWSGLVDF 60
           MVDSGATHNFITE EAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLGGWSGLVDF
Sbjct: 481 MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDF 540

Query: 61  VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGSTLSIVQTDLRQPDGLKMISAMKLK 120
           VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITG T S+VQTDLRQPDGLKMISAM+LK
Sbjct: 541 VVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLK 600

Query: 121 KGLSRDEPTFMAIPLNSLENSRKTVPKEIMRVLEKYHDMMLDSLPKSLPPRRMIDHEIEL 180
           KGLSRDEPTFMAIPL S ENS +TVPKEIMRVLEKY D+M DSLPKSLPPRRMIDHEIEL
Sbjct: 601 KGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIEL 660

Query: 181 VPGAKPSAKNAYRMVPLELAELRKQLDELLNAGFIRLAKALYGAPVLFQKKKDGGLRLCI 240
           VPGAKP AKNAYRM P ELAELRKQLDELLNAGFIR AKA YGAPVLFQ+KKDG LRLCI
Sbjct: 661 VPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCI 720

Query: 241 NYRALNKLTIRNKYPLPIITDLFDRLHWAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 300
           +YRALNKLT+RNKYPLPIITDLFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Sbjct: 721 DYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 780

Query: 301 GVFEFLVMQFGLTNA 316
           G FEFLVM FGLTNA
Sbjct: 781 GAFEFLVMPFGLTNA 795

The following BLAST results are available for this feature:

BLAST of Cmc07g0191531.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048703.1	2.1e-179	99.69	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK07954.1	1.2e-161	92.70	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0052270.1	7.6e-161	92.38	uncharacterized protein E6C27_scaffold207G00960 [Cucumis melo var. makuwa]	[more]
KAA0067557.1	1.3e-160	92.06	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	1.3e-160	92.06	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]

BLAST of Cmc07g0191531.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	1.7e-30	76.54	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	9.8e-26	35.53	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	9.8e-26	35.53	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	2.0e-23	33.14	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.0e-23	33.14	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0191531.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TYN4	1.0e-179	99.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3C9P8	5.7e-162	92.70	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5A7UAP7	3.7e-161	92.38	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3C4R1	6.3e-161	92.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	6.3e-161	92.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc07g0191531.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..105 e-value: 7.4E-17 score: 63.3
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 1..82
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 174..314 e-value: 3.6E-50 score: 172.2
None	No IPR available	PFAM	PF08284	RVP_2	coord: 2..82 e-value: 3.5E-9 score: 36.6
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 144..315
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 144..315
None	No IPR available	CDD	cd01647	RT_LTR	coord: 213..315 e-value: 1.71174E-43 score: 145.431
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 1..77 e-value: 5.3161E-18 score: 75.836
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 254..315 e-value: 3.6E-50 score: 172.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 153..315

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0191531	Cmc07g0191531	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191531.1-exon	Cmc07g0191531.1-exon-CMiso1.1chr07:11337351..11338316	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191531.1-cds	Cmc07g0191531.1-cds-CMiso1.1chr07:11337351..11338316	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191531.1	Cmc07g0191531.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding