Cmc07g0191061.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0191061.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 10532809 .. 10533568 (+)
Sequence length	760
RNA-Seq Expression	Cmc07g0191061.1
Synteny	Cmc07g0191061.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGATACAAAATTCATCCATTCATATTCATCCAACTGTCTTCAATGAAAACCCCAAAACACCAATTATTTAGACGGTGATAGCCACGTGAGTGATCACTATAATTTCACTTCAATTTTCTCTCATCTTATCATTATCATTATCGTTATGAACTACGAACTATTCCCCATTCTATAAACTTAGCTTACATCCACAAATTCTTCACCCTTTTTCTCTCTTCCAGTTTCATTCACGTAAGCTGCAATGACAACCGCGGTGACGACGGCCATGGCAATCCTCATTTTGACGCTAAGCATGAGTAGTTATTGCAAGGCTGCTCCTCTACTTCCTTCGAATTTCGTGAACGGGACGATCACGGCTATGGCATCCAGCATGTTGTGTAATGGGGTCCTCGAAGATTGCCTCAATGTTGAAGAAAATGTCATTAATTATGTTGGTACAAAGACCGAAAGTCGATATTCAAGCATATGTGGTCGGTTTTATAGTGGTCGAAGGTATATTGAATGTATAACAAGTAAAGGATCCTCCAAACCAAAAATTTGTAGACCAAATAGTTATGACCGCAGCTGTTAGTCAAGAACAGAGAGGCCCAGTTTTTTTTTTTTTTTTTTTTTAATAATTTCTTATCACCATTAACCCTTCTTCAGCTTCTTCATAATGCTATTTTATTATGCTATATTTCTTTTGGTACTTACTTAAATACTGTTTTGTTTTGTTTGTCGTTTGGGTTAAAAATTGATCACCATATACATTGGGGATG

mRNA sequence

TGTGATACAAAATTCATCCATTCATATTCATCCAACTGTCTTCAATGAAAACCCCAAAACACCAATTATTTAGACGGTGATAGCCACGTGAGTGATCACTATAATTTCACTTCAATTTTCTCTCATCTTATCATTATCATTATCGTTATGAACTACGAACTATTCCCCATTCTATAAACTTAGCTTACATCCACAAATTCTTCACCCTTTTTCTCTCTTCCAGTTTCATTCACGTAAGCTGCAATGACAACCGCGGTGACGACGGCCATGGCAATCCTCATTTTGACGCTAAGCATGAGTAGTTATTGCAAGGCTGCTCCTCTACTTCCTTCGAATTTCGTGAACGGGACGATCACGGCTATGGCATCCAGCATGTTGTGTAATGGGGTCCTCGAAGATTGCCTCAATGTTGAAGAAAATGTCATTAATTATGTTGGTACAAAGACCGAAAGTCGATATTCAAGCATATGTGGTCGGTTTTATAGTGGTCGAAGGTATATTGAATGTATAACAAGTAAAGGATCCTCCAAACCAAAAATTTGTAGACCAAATAGTTATGACCGCAGCTGTTAGTCAAGAACAGAGAGGCCCAGTTTTTTTTTTTTTTTTTTTTTAATAATTTCTTATCACCATTAACCCTTCTTCAGCTTCTTCATAATGCTATTTTATTATGCTATATTTCTTTTGGTACTTACTTAAATACTGTTTTGTTTTGTTTGTCGTTTGGGTTAAAAATTGATCACCATATACATTGGGGATG

Coding sequence (CDS)

ATGACAACCGCGGTGACGACGGCCATGGCAATCCTCATTTTGACGCTAAGCATGAGTAGTTATTGCAAGGCTGCTCCTCTACTTCCTTCGAATTTCGTGAACGGGACGATCACGGCTATGGCATCCAGCATGTTGTGTAATGGGGTCCTCGAAGATTGCCTCAATGTTGAAGAAAATGTCATTAATTATGTTGGTACAAAGACCGAAAGTCGATATTCAAGCATATGTGGTCGGTTTTATAGTGGTCGAAGGTATATTGAATGTATAACAAGTAAAGGATCCTCCAAACCAAAAATTTGTAGACCAAATAGTTATGACCGCAGCTGTTAG

Protein sequence

MTTAVTTAMAILILTLSMSSYCKAAPLLPSNFVNGTITAMASSMLCNGVLEDCLNVEENVINYVGTKTESRYSSICGRFYSGRRYIECITSKGSSKPKICRPNSYDRSC

Homology

[Close]

BLAST of Cmc07g0191061.1 vs. NCBI nr
Match: KGN53789.1 (hypothetical protein Csa_015152 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 8.4e-27
Identity = 68/105 (64.76%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 6   TTAMAILILTLSMSSYCKAAPLLPSNFVNGTITAMASSMLCNGVLEDCLNVEENVINYVG 65
           TTAM ILILTL++SSYC AA +LPSNF N TITAM S++ CNG+L+ C NVEEN I+Y  
Sbjct: 9   TTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENGIHYYS 68

Query: 66  T-KTESRYSSICGRFYSGRRYIECITSKGSSKPKICRPNSYDRSC 110
           T +T SR SS+CGRFY+G  YI+CIT++GS KPK CR ++YDR+C
Sbjct: 69  TPRTGSRASSVCGRFYNG-SYIKCITTQGSPKPKDCR-SAYDRTC 111

[Close]

BLAST of Cmc07g0191061.1 vs. ExPASy TrEMBL
Match: A0A0A0KY59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.1e-27
Identity = 68/105 (64.76%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 6   TTAMAILILTLSMSSYCKAAPLLPSNFVNGTITAMASSMLCNGVLEDCLNVEENVINYVG 65
           TTAM ILILTL++SSYC AA +LPSNF N TITAM S++ CNG+L+ C NVEEN I+Y  
Sbjct: 9   TTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENGIHYYS 68

Query: 66  T-KTESRYSSICGRFYSGRRYIECITSKGSSKPKICRPNSYDRSC 110
           T +T SR SS+CGRFY+G  YI+CIT++GS KPK CR ++YDR+C
Sbjct: 69  TPRTGSRASSVCGRFYNG-SYIKCITTQGSPKPKDCR-SAYDRTC 111

The following BLAST results are available for this feature:

BLAST of Cmc07g0191061.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53789.1	8.4e-27	64.76	hypothetical protein Csa_015152 [Cucumis sativus]	[more]

BLAST of Cmc07g0191061.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0191061.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY59	4.1e-27	64.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1	[more]

BLAST of Cmc07g0191061.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0191061	Cmc07g0191061	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191061.1-exon	Cmc07g0191061.1-exon-CMiso1.1chr07:10532809..10533568	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191061.1-five_prime_utr	Cmc07g0191061.1-five_prime_utr-CMiso1.1chr07:10532809..10533051	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191061.1-cds	Cmc07g0191061.1-cds-CMiso1.1chr07:10533052..10533381	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191061.1-three_prime_utr	Cmc07g0191061.1-three_prime_utr-CMiso1.1chr07:10533382..10533568	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0191061.1	Cmc07g0191061.1-protein	polypeptide