Cmc07g0188851.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0188851.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein HAPLESS 2 isoform X1
Location	CMiso1.1chr07: 7334206 .. 7336844 (+)
Sequence length	1099
RNA-Seq Expression	Cmc07g0188851.1
Synteny	Cmc07g0188851.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATGCCCAAATCCTCCAAGTTTCTCTCAAACACTCCCAACTTCTTCCTCTCTCCCCGACGGTTATCTCTCCACTGTGGAAATGAAAACACCCGCCATTCTTCTTCCATCTCCTGTTCTTCAATTTCCGGTGCTCTTCAACCATGTAATTCTTTCATTTCTATCAACACTTTCAGTTCCTCTCTCTGTTTATGATTCTAATAATTCAAATTTTCCGAACAAGCTTCTTTGATTGCTCTGAAGTACGAATCTAGTCAAATACTCATGATCGATACACGATCCTTCTCTTTAAATTTGACCCTAACCCCTTTCTACTCATCGTCTCTTCTAGTTAATTGATTCAATTTAGGATTTGGGGTTTCACTATTTCATCTTATTTCGCAGGAGTGTTTTGATTATGTTGTAATTCATTAGTTTTTAGTGGATGCTGAATCTATACGCGTAATGGGTAATGTAGCCAGTTCATTGGCCTCTGATGTTTTTTCGGCCATTGGCAAAATCTTTGGATCTCCTCTTGATTTTCTCTCTGGAAGGTCCTGCAGGTTGGTTTCTTTAATTTTCTTTTGATTTGCTCACCATGTGGCTTCCATCCGTAAACTTAATTATTTACCTGATTTTGTCATGTTCTGTGCTTTTTTTTTTTTCCTTTTTTAATTGAATGTTGATTACCTGATTTTTTGTCGTATTTTTTAATTTTTGATTGAGTATCGTTTACCTGCTTTTGTCGTATTTTTGGCTTTTTGATTGAGTATTCTTTACCTGATTTTGTCGCTGCTTGCACATGTTTGCAGTTCAGTATGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTGCCAATTTGGTAAAGATGGGAATGGTTTTTATTCTCTCATACTTTGGTGAGTTAATCAATATAGTTTTTTTTGTGTCTCTGCCTTGGTATTTCTAGTATGCTGGAATTTCTCTGGTTTCCGTGGTTGGAAATTGGAAAAAGGCAGCTAAATCCTCGCATATTGAGGTCTGAAGTAGGTCAAGTTATAAGTTTGGTCCCTAACTTTGAAGTTTGTGTCTAATTGATATTGAACTTTCGAAAATATCTAATAAGTACTTAAACTTTCAAATTGCAGTCTCCGACAAATTAAAAAAATTTAAAACTAGTTGATTTGTTAGAAATAAATTAATTTTTGATGTTTAACGAAACTCTAAACTTTCTATCTTGTATCTAGTAGATCAGTGATTTTGAGATGTTTGAATGTGATGGGTCTAAATATGTGGTGACTAATTTATACTCTAACCTAGAACTTAATATACAAGCACTTCTAGTTCTGTAAGCATAGCAAGGTTACCATCATATTTGATTACAAGTTACAACTAATGATTCACTATTAATGAACTGGCTTCTCTTATATATAGAACGCTTCTAGTTTATTAGTTTAAACTAATTTGGTATGGTATGAAAACATGCAATTGTTTTTTCTTGTTTTGAAATGTATAATTCACATCTCTCAACATTTTAGCAGTCAAATTAAAGTCACTAGCATCAGTAATTTTCTGTATATAATGATAAAATGCCAACCAAGTTTATATTGGTATGGAAAAATGTAGCTATTTTCCCTGTGTTTCGGAATGTGATAACTTTGAGTTATTGAATGAAGTCTAATTAGGTCATCGAGCTGAAGCACATGGCTTACTAATGTAATTGTAATGGGATATATTATATAACCTTATCTATGCCTGGTATGACTCCAAATCATAGGCTCACTAGATCAAAAGAAATATCTCAGTAAAGGGATCTAAATCCTGTTAAGATGTTTTAGTTACAAACTTACAAGTAATAGTGATTACTTTTAGGGTCTTAGAACTTGGTACCAAAAAATATATGTGCATTTTTGTTTGTTGTTTATTACACAGAACACTAGTTCATTACTTGAATTTGCCTTTTCCTATGCAGTTCTTTTACTTCTCTATTTGCTACATAAAATTGGTATATTTGGATGCATTGGTCGGGGGCTCTGCAGAATGATATGGACTTGTTTAGCTTCTTATTTCTATGCATGGGAGTACTGCTGCAGTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGACGACGACACGTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGCCAGCATGAGTCAACAAGCGACTCGAGCAATGTCCTTGAACATGTCGAGTCGAGAAGTAGCAGATGGTCGTCTCGACGATGGAGAAGGAACCACAAAGATTCTCAAAAGAGAAAATCGTTGAGGCCAAAAGGTCATGGAGTTCGAGTAAGGAGTGGTAGAGTGTTGGTTTATGGTAAGCACAGAAGAAAATCTGTTGAAGTTGGGAATCATTCGAATGAGATAGATAGTTTTGGAATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATATAGAAGAGGGAGGCAAAGATGATAGTAGCTGGTTGTGGTTGGGATATGAACTGTATATTTGCATTTTGTGTTCAAAATTATTCCAAGTGTCTGAATCTATTTGTTTTTTTTAGAAGGGTTTTTCTTTTTTTGCTCGTCATCTTTTTTTTTTTTTTTTCTGTCATTATAAAAACTCTCATTTTTGTTTCATTATTGCCTAT

mRNA sequence

GCATGCCCAAATCCTCCAAGTTTCTCTCAAACACTCCCAACTTCTTCCTCTCTCCCCGACGGTTATCTCTCCACTGTGGAAATGAAAACACCCGCCATTCTTCTTCCATCTCCTGTTCTTCAATTTCCGGTGCTCTTCAACCATGAGTGTTTTGATTATGTTGTAATTCATTAGTTTTTAGTGGATGCTGAATCTATACGCGTAATGGGTAATGTAGCCAGTTCATTGGCCTCTGATGTTTTTTCGGCCATTGGCAAAATCTTTGGATCTCCTCTTGATTTTCTCTCTGGAAGGTCCTGCAGTTCAGTATGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTGCCAATTTGGTAAAGATGGGAATGGTTTTTATTCTCTCATACTTTGTTCTTTTACTTCTCTATTTGCTACATAAAATTGGTATATTTGGATGCATTGGTCGGGGGCTCTGCAGAATGATATGGACTTGTTTAGCTTCTTATTTCTATGCATGGGAGTACTGCTGCAGTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGACGACGACACGTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGCCAGCATGAGTCAACAAGCGACTCGAGCAATGTCCTTGAACATGTCGAGTCGAGAAGTAGCAGATGGTCGTCTCGACGATGGAGAAGGAACCACAAAGATTCTCAAAAGAGAAAATCGTTGAGGCCAAAAGGTCATGGAGTTCGAGTAAGGAGTGGTAGAGTGTTGGTTTATGGTAAGCACAGAAGAAAATCTGTTGAAGTTGGGAATCATTCGAATGAGATAGATAGTTTTGGAATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATATAGAAGAGGGAGGCAAAGATGATAGTAGCTGGTTGTGGTTGGGATATGAACTGTATATTTGCATTTTGTGTTCAAAATTATTCCAAGTGTCTGAATCTATTTGTTTTTTTTAGAAGGGTTTTTCTTTTTTTGCTCGTCATCTTTTTTTTTTTTTTTTCTGTCATTATAAAAACTCTCATTTTTGTTTCATTATTGCCTAT

Coding sequence (CDS)

ATGGGTAATGTAGCCAGTTCATTGGCCTCTGATGTTTTTTCGGCCATTGGCAAAATCTTTGGATCTCCTCTTGATTTTCTCTCTGGAAGGTCCTGCAGTTCAGTATGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTGCCAATTTGGTAAAGATGGGAATGGTTTTTATTCTCTCATACTTTGTTCTTTTACTTCTCTATTTGCTACATAAAATTGGTATATTTGGATGCATTGGTCGGGGGCTCTGCAGAATGATATGGACTTGTTTAGCTTCTTATTTCTATGCATGGGAGTACTGCTGCAGTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGACGACGACACGTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGCCAGCATGAGTCAACAAGCGACTCGAGCAATGTCCTTGAACATGTCGAGTCGAGAAGTAGCAGATGGTCGTCTCGACGATGGAGAAGGAACCACAAAGATTCTCAAAAGAGAAAATCGTTGAGGCCAAAAGGTCATGGAGTTCGAGTAAGGAGTGGTAGAGTGTTGGTTTATGGTAAGCACAGAAGAAAATCTGTTGAAGTTGGGAATCATTCGAATGAGATAGATAGTTTTGGAATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATATAGAAGAGGGAGGCAAAGATGA

Protein sequence

MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMVFILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR

Homology

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BLAST of Cmc07g0188851.1 vs. NCBI nr
Match: XP_008444189.1 (PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 467.2 bits (1201), Expect = 8.3e-128
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
           FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL
Sbjct: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

[Close]

BLAST of Cmc07g0188851.1 vs. NCBI nr
Match: XP_004142706.1 (protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 protein HAPLESS 2 isoform X1 [Cucumis sativus] >KGN54547.1 hypothetical protein Csa_012210 [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 9.2e-119
Identity = 222/238 (93.28%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANL+KMGMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLLKMGMV 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
           FILSYFVLLLLYLLHKIGIF CIGRGLCRMIWTCLASYFYAWEYCC FMCIKLASVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFRCIGRGLCRMIWTCLASYFYAWEYCCGFMCIKLASVKRTR 120

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RRHVRRRD+EEEFE EEGKC+HESTSDS+NVLEHVES+SSR  S+RWRRNH+DSQ+RKSL
Sbjct: 121 RRHVRRRDMEEEFEIEEGKCRHESTSDSTNVLEHVESKSSRRVSQRWRRNHRDSQRRKSL 180

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RPKGHGVRVRSGRVLVYGKHRRKSVEVGNH NEIDSFGMYGSSK+VHKERKYRRGR R
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

[Close]

BLAST of Cmc07g0188851.1 vs. NCBI nr
Match: XP_038897053.1 (uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida])

HSP 1 Score: 416.0 bits (1068), Expect = 2.2e-112
Identity = 211/238 (88.66%), Postives = 223/238 (93.70%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASSL S +FSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NL+KMGMV
Sbjct: 1   MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMV 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
            ILSYFVLL L LLHKIGIFGCIGRGLC+MIWTCLASYFYAWEYCC+FMCIKLASVKRTR
Sbjct: 61  LILSYFVLLFLCLLHKIGIFGCIGRGLCKMIWTCLASYFYAWEYCCTFMCIKLASVKRTR 120

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RRH+RRRDLEEEFESEEGKCQH STSDSSNV EHVESRSSR + RRWRRNH+ S+ RKSL
Sbjct: 121 RRHLRRRDLEEEFESEEGKCQHGSTSDSSNVPEHVESRSSRRACRRWRRNHRSSRMRKSL 180

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RP+GHG+RVRSGRVLVYGKHRRKSVEVGNH NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 181 RPRGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRESQR 238

[Close]

BLAST of Cmc07g0188851.1 vs. NCBI nr
Match: XP_022154011.1 (uncharacterized protein LOC111021352 [Momordica charantia])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 181/238 (76.05%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+K+GMV
Sbjct: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
            ILS FV+LLLYLLHKIGIFGCI RGLCRM WTC+ASYFYAW+YCC+FMCIKL SVKRTR
Sbjct: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RR  RRRDLEEEFESE GK ++ S+SDSS+V E +E RSS+ +SRRWR NH+ SQ RK+L
Sbjct: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RPK  G+RVRSGR LVYGKHRRKS EV N   EI S G +GSSKFVH+E +Y+RGRQ+
Sbjct: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245

[Close]

BLAST of Cmc07g0188851.1 vs. NCBI nr
Match: XP_038897054.1 (uncharacterized protein LOC120085227 isoform X2 [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 185/238 (77.73%), Postives = 196/238 (82.35%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASSL S +FSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NL+KMGMV
Sbjct: 1   MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMV 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
            ILSYF                             ASYFYAWEYCC+FMCIKLASVKRTR
Sbjct: 61  LILSYF-----------------------------ASYFYAWEYCCTFMCIKLASVKRTR 120

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RRH+RRRDLEEEFESEEGKCQH STSDSSNV EHVESRSSR + RRWRRNH+ S+ RKSL
Sbjct: 121 RRHLRRRDLEEEFESEEGKCQHGSTSDSSNVPEHVESRSSRRACRRWRRNHRSSRMRKSL 180

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RP+GHG+RVRSGRVLVYGKHRRKSVEVGNH NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 181 RPRGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRESQR 209

[Close]

BLAST of Cmc07g0188851.1 vs. ExPASy TrEMBL
Match: A0A1S4DVV8 (protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.0e-128
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
           FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL
Sbjct: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

[Close]

BLAST of Cmc07g0188851.1 vs. ExPASy TrEMBL
Match: A0A0A0L1V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.4e-119
Identity = 222/238 (93.28%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANL+KMGMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLLKMGMV 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
           FILSYFVLLLLYLLHKIGIF CIGRGLCRMIWTCLASYFYAWEYCC FMCIKLASVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFRCIGRGLCRMIWTCLASYFYAWEYCCGFMCIKLASVKRTR 120

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RRHVRRRD+EEEFE EEGKC+HESTSDS+NVLEHVES+SSR  S+RWRRNH+DSQ+RKSL
Sbjct: 121 RRHVRRRDMEEEFEIEEGKCRHESTSDSTNVLEHVESKSSRRVSQRWRRNHRDSQRRKSL 180

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RPKGHGVRVRSGRVLVYGKHRRKSVEVGNH NEIDSFGMYGSSK+VHKERKYRRGR R
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

[Close]

BLAST of Cmc07g0188851.1 vs. ExPASy TrEMBL
Match: A0A6J1DMF3 (uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021352 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.1e-93
Identity = 181/238 (76.05%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+K+GMV
Sbjct: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
            ILS FV+LLLYLLHKIGIFGCI RGLCRM WTC+ASYFYAW+YCC+FMCIKL SVKRTR
Sbjct: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RR  RRRDLEEEFESE GK ++ S+SDSS+V E +E RSS+ +SRRWR NH+ SQ RK+L
Sbjct: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           RPK  G+RVRSGR LVYGKHRRKS EV N   EI S G +GSSKFVH+E +Y+RGRQ+
Sbjct: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245

[Close]

BLAST of Cmc07g0188851.1 vs. ExPASy TrEMBL
Match: A0A1S3B9T1 (uncharacterized protein LOC103487604 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 67  VLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRR 126
           VLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRR
Sbjct: 23  VLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRR 82

Query: 127 RDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHG 186
           RDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHG
Sbjct: 83  RDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHG 142

Query: 187 VRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 239
           VRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR
Sbjct: 143 VRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 194

[Close]

BLAST of Cmc07g0188851.1 vs. ExPASy TrEMBL
Match: A0A6J1FIX0 (uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC111445893 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.4e-80
Identity = 171/238 (71.85%), Postives = 190/238 (79.83%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNVASSLAS +F A+ K+FGSPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+KMGMV
Sbjct: 8   MGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKMGMV 67

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
            IL+YFVLLLLYL HKIGIFGCIGRGLCRMIWTCLASY +AWEYCC+FMCIKLASVKRTR
Sbjct: 68  VILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKLASVKRTR 127

Query: 121 RRHVRRRDLEEEFESEE-GKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKS 180
           RRH RRRDLEEE ESEE  K ++ S+SDSSN  + +ESR S+  SR+ RR+H+ SQ  K+
Sbjct: 128 RRH-RRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHRGSQTSKT 187

Query: 181 LRPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQ 238
           LRP  HG+RVRSGRVLVY KH                    GSSK V KER YRRGRQ
Sbjct: 188 LRPPSHGIRVRSGRVLVYSKH--------------------GSSKIVQKERNYRRGRQ 224

[Close]

BLAST of Cmc07g0188851.1 vs. TAIR 10
Match: AT1G21722.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 148.3 bits (373), Expect = 7.9e-36
Identity = 98/235 (41.70%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGNV  S  +    +IG  FGSPLDFLSG+SCSSVC S WDFICY+ENFCVANL K  ++
Sbjct: 1   MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICYVENFCVANLAKTALI 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
            ILSYF L  +Y+L+K+G + CI  G  +++W  ++ +FY   YCCSF C  L   KR R
Sbjct: 61  LILSYFFLFFIYMLYKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKRRR 120

Query: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180
           RR    R +EE+++            D+S+  + V+   S    R  R   K+ + RKSL
Sbjct: 121 RRR-HNRYIEEDYD------------DNSDDDDDVDDDGSFTYHRSKRECRKEERLRKSL 180

Query: 181 RPKGHGVRVRSGRVLVYGKHRRKS--VEVGNHSNEIDSFGMYGSSKFVHKERKYR 234
           RP+ H VRV      V   HR  S   +  +  + I    +   SKF  K  K R
Sbjct: 181 RPRNHRVRVG-----VRKDHRSDSGLSQHADGGSPIHGVRVSRESKFARKVSKRR 217

[Close]

BLAST of Cmc07g0188851.1 vs. TAIR 10
Match: AT1G78922.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 4.8e-17
Identity = 67/217 (30.88%), Postives = 109/217 (50.23%), Query Frame = 0


Query: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60
           MGN     ++D+   IG IF +PL    GRSC  VC   WD  C+IE+FC+ ++ K+ ++
Sbjct: 1   MGNAIGKASNDIGGFIGNIFTAPLKATLGRSCLDVCSGPWDLECFIEHFCLPDIAKLVLM 60

Query: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120
             L + +L+ + LL K+GI  C+ + +C+M     A+Y++      S +C  L ++ R  
Sbjct: 61  SSLCFIILMFITLLFKLGICQCVVKSICKMSCAACAAYWFDIGEMISCLCHSLTNINRVN 120

Query: 121 RRHVRRRDLEE---EFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKR 180
           RR  R  D+E    ++ S++      S+SDS + ++++     R   RR R   K S   
Sbjct: 121 RRRKRLDDIEATTYDYPSDD----ESSSSDSPSRIDNI-----RPKQRRRRLGSKHSHHH 180

Query: 181 KSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEI 215
                  HG   R+ R L+    R+ SV VG  S  +
Sbjct: 181 -------HGSN-RNNRRLIRLPSRQLSVRVGGKSRRV 200

The following BLAST results are available for this feature:

BLAST of Cmc07g0188851.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444189.1	8.3e-128	100.00	PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED...	[more]
XP_004142706.1	9.2e-119	93.28	protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 protein HAPLESS 2...	[more]
XP_038897053.1	2.2e-112	88.66	uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida]	[more]
XP_022154011.1	1.5e-92	76.05	uncharacterized protein LOC111021352 [Momordica charantia]	[more]
XP_038897054.1	1.5e-92	77.73	uncharacterized protein LOC120085227 isoform X2 [Benincasa hispida]	[more]

BLAST of Cmc07g0188851.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0188851.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DVV8	4.0e-128	100.00	protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1	[more]
A0A0A0L1V0	4.4e-119	93.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1	[more]
A0A6J1DMF3	7.1e-93	76.05	uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A1S3B9T1	1.6e-89	100.00	uncharacterized protein LOC103487604 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1FIX0	2.4e-80	71.85	uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC1114458...	[more]

BLAST of Cmc07g0188851.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21722.1	7.9e-36	41.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G78922.1	4.8e-17	30.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..198
None	No IPR available	PANTHER	PTHR35278	TRANSMEMBRANE PROTEIN-RELATED	coord: 1..235
None	No IPR available	PANTHER	PTHR35278:SF1	F8K7.16	coord: 1..235

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0188851	Cmc07g0188851	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188851.1-exon	Cmc07g0188851.1-exon-CMiso1.1chr07:7334206..7334349	exon
Cmc07g0188851.1-exon	Cmc07g0188851.1-exon-CMiso1.1chr07:7334589..7334746	exon
Cmc07g0188851.1-exon	Cmc07g0188851.1-exon-CMiso1.1chr07:7334996..7335096	exon
Cmc07g0188851.1-exon	Cmc07g0188851.1-exon-CMiso1.1chr07:7336149..7336844	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188851.1-five_prime_utr	Cmc07g0188851.1-five_prime_utr-CMiso1.1chr07:7334206..7334349	five_prime_UTR
Cmc07g0188851.1-five_prime_utr	Cmc07g0188851.1-five_prime_utr-CMiso1.1chr07:7334589..7334648	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188851.1-cds	Cmc07g0188851.1-cds-CMiso1.1chr07:7334649..7334746	CDS
Cmc07g0188851.1-cds	Cmc07g0188851.1-cds-CMiso1.1chr07:7334996..7335096	CDS
Cmc07g0188851.1-cds	Cmc07g0188851.1-cds-CMiso1.1chr07:7336149..7336666	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188851.1-three_prime_utr	Cmc07g0188851.1-three_prime_utr-CMiso1.1chr07:7336667..7336844	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188851.1	Cmc07g0188851.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane