Cmc06g0176401.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc06g0176401.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein cornichon homolog 4-like
Location	CMiso1.1chr06: 33230544 .. 33233518 (-)
Sequence length	1142
RNA-Seq Expression	Cmc06g0176401.1
Synteny	Cmc06g0176401.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATAAGTGAAACTTTTGAATGTTTCGGTTTATTTTTATAATTTAGCATATTTTCAAAGCCTAAATTTGATTTGATTTCCAAAAGCATCTTCAGAAATCTGACCCCCTAACCACCCGACGGCGGCTTTCGTCAACGTCGAGTTCTTCCGGTCATCCAAGTTCCAAATCCACTTTCCGATTCATCCTTCACCACAAACCTTCGTTAAACTTCCGGTTCCGTGAACTATAGCGTGAGTTTTCATCCCTAATCTTCTTCTTCTGCATCTTCACTTAGCCGCCATCTTGCTCCGAAATGGTGTTACTTCAATCATTCTGTTCGTCTTTTAACCAAGAATCACTGGTAATATAGTTTGGTTGACTGCGGAAGGGAAGAGGAGGAGCATGGAGGATTTATATGTGTGGCTTGTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGGTAAATTCGAAAACCCTATCTCTTTGTCTCGCATTATCTTCCTTTCAAGTTCGTAAAGTAGAATCAAAGACGGTTTGTGTAAAAATGTAAACGCGGATTTATTTTACTACCATTTCTGAACATTAAATTTGAAGTAAAATAACAATTTCGATGCGCTATTTGTTCATTTCGAACAGATTAGGGTTTAGCACATTTAGAATTTACTTATTTTGGAAGCACTTTTAAAGAAACCGTAATTTTTCTAGTGCATCTTGGATTGGTTTTCTATTGAGTTTTCCAGTAGCGGCTAGTAATCATTGGGTTTTTTTTTATTCAATTATGAATTGCATATCATGCTCTCTAGTTCTCTTGTTTTAATAATTTGCAGTTTTGGTTTCTTTACCCCAATTTCTCGATGAGGTCTGGGTTCTTGCTGGCGGTAGTTTGTTTGAAGTTTATTTATAAATCCTTACGTTTTTGGTGTCGTTTGTTATGAGCAAAGTATGATTAAAGTTAAAATTTATGGGATATAGCCTTGAAGATAATGGATGCAATGGATCATTATAACATGTTGACTGATTCTTAGTTAGGACTTTCTAATGTTGATCCTCCAAAAATCTATTGGTAGAGGCTCAGTTTTCCAAGAGGCTGGCAATGACTAATGAGCTGTATCGAAACATATTAAAAAGTTTAAATATCATTTTAGGACGTTTTTCAATCAAGTTTTCCATTTGTATTTATGCATATCAGTTTGCCTCTCTTTGATCTTTTTGAGTATGCAGGATCAAGAATCAAGTTCTTGTTTTTAATTTGTTTCTATCATCATCATCATCATCATTATTTTTGTGTAGCTCATGTGCTTGGCAGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCGTTGCCATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATGTTATGTGGGCCCTACATATACTATAATGTGAGACTGTAAGTATTTTCATCCCTCACCTTTGATTGAACTTATTATCAAAAGCAAAGAATATCTTACATGATATGTACAGTACAATGCAAACAAAAACACATGATTTTGATTCAACAGTTTTGACCATATAGGATATATGCTTCTGATTTTAAGCATTTAGAATCATTGATTTGACTTAATGTACAGATACTTGATGCTAGATATGATGATTATTCACATGGCTAGCTTACTGTCAGTGGGTAGCATAGATCATGTTGGTATGTAAGATTGTAAACTGTGGCTGCTTAATATTCTAGTTGGGATGTGATGGGAGACTACTATTTGGAGAATATGTCTAGTTACACTTTTAATACATTTTTTCGAACTACAGATTGTTGACTATCCATGATGTGTCGTGTGTTGCATAAGGTATATGGTTAGAGCTTGCTTTATTTACATCCCAGAAAATGCACGTGGTAGCGTAGAGTCATAGTAGAACCTCCTTAGTTGAAGAACTAATTTACCATGTAATGTACCATTCAAAACATTTGAGTCAGAATCTCTCTTTTGCTCAAAGTTGAGGCCTATCCTATATTTGGAAAAACTAAGTATTTTGAATATTGTAATATTTTGGTAACATAACTCCCAGCTCTAGCATTCTTACATCAGTTCCCTGAGTAGTGGGGTGGTCATGGCAATATTCTATTCATTACATATTTGTAGGTCCACAGGATATGGATAGAAACCAAAAAAATGAAATTGTAGTGAAATATTAAAGGATAAACGAATACGATGATGCCTCTCAAGTACTCCAAAGCCTAAACCAACTAAAGTATTGTCTACCTTCATTCATTTTTCCCCACTCCCTATATCTAATAATATTACTAACAATTACCTCATATTACTCTTTTATTGTGATCAGATATCTACGAAGACAGTACCTGGTAGATGTTACAGAGATATTCAACATGCTAAACTGGGAAAAGAAGCAACGGCTTTTCAAACTAGCCTATCTAGTTGTCCTCCTCTTCCTTTCTATATTCTGGTACACTTGGAGACGAGAAAGACTTTTCATGTTCTTGTTCTGTTGCTTTTTCTTGACTTAACTAGTTAAATACCACTGACCGAGTTCTCGCTCGATTGTCATTACAGGATGATATATCATGCTTTGGAAGATGATGAATGAATGAATGAATAGAAACAATGGCTTGCATGCTGTTGTTGATTGTATCTCAACGGTTGTTCCCATTAGTTGTGAGTTGAATTTCTATCCTCCAGTACCTTTTTTATTTTCCTGAAGCTGCTGCACTTTGAGGATTTCATTGACATTCTCGTTTGGGTTGGGAACTTCATTTGTATTCTGGACTCTAGACAGAGGTTTAGAAAGCAGATTTCACGTCAGTACTGTTCTATTTAGGTGCTCTCCGTGGTAAAATGACTATAATGAATTATCTCTCTCTCTCTCTAAAAAAAGAATGAATAGAAAAGAGTAGAAATTCAACATCGACTTCTGTTTGATGAAATTTTAATTATTC

mRNA sequence

GTTATAAGTGAAACTTTTGAATGTTTCGGTTTATTTTTATAATTTAGCATATTTTCAAAGCCTAAATTTGATTTGATTTCCAAAAGCATCTTCAGAAATCTGACCCCCTAACCACCCGACGGCGGCTTTCGTCAACGTCGAGTTCTTCCGGTCATCCAAGTTCCAAATCCACTTTCCGATTCATCCTTCACCACAAACCTTCGTTAAACTTCCGGTTCCGTGAACTATAGCGTGAGTTTTCATCCCTAATCTTCTTCTTCTGCATCTTCACTTAGCCGCCATCTTGCTCCGAAATGGTGTTACTTCAATCATTCTGTTCGTCTTTTAACCAAGAATCACTGGTAATATAGTTTGGTTGACTGCGGAAGGGAAGAGGAGGAGCATGGAGGATTTATATGTGTGGCTTGTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGCTCATGTGCTTGGCAGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCGTTGCCATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATGTTATGTGGGCCCTACATATACTATAATGTGAGACTATATCTACGAAGACAGTACCTGGTAGATGTTACAGAGATATTCAACATGCTAAACTGGGAAAAGAAGCAACGGCTTTTCAAACTAGCCTATCTAGTTGTCCTCCTCTTCCTTTCTATATTCTGGATGATATATCATGCTTTGGAAGATGATGAATGAATGAATGAATAGAAACAATGGCTTGCATGCTGTTGTTGATTGTATCTCAACGGTTGTTCCCATTAGTTGTGAGTTGAATTTCTATCCTCCAGTACCTTTTTTATTTTCCTGAAGCTGCTGCACTTTGAGGATTTCATTGACATTCTCGTTTGGGTTGGGAACTTCATTTGTATTCTGGACTCTAGACAGAGGTTTAGAAAGCAGATTTCACGTCAGTACTGTTCTATTTAGGTGCTCTCCGTGGTAAAATGACTATAATGAATTATCTCTCTCTCTCTCTAAAAAAAGAATGAATAGAAAAGAGTAGAAATTCAACATCGACTTCTGTTTGATGAAATTTTAATTATTC

Coding sequence (CDS)

ATGGAGGATTTATATGTGTGGCTTGTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGCTCATGTGCTTGGCAGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCGTTGCCATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATGTTATGTGGGCCCTACATATACTATAATGTGAGACTATATCTACGAAGACAGTACCTGGTAGATGTTACAGAGATATTCAACATGCTAAACTGGGAAAAGAAGCAACGGCTTTTCAAACTAGCCTATCTAGTTGTCCTCCTCTTCCTTTCTATATTCTGGATGATATATCATGCTTTGGAAGATGATGAATGA

Protein sequence

MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLLFLSIFWMIYHALEDDE

Homology

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BLAST of Cmc06g0176401.1 vs. NCBI nr
Match: XP_008448916.1 (PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1 PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 6.5e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLSIFWMIYHALEDDE
Sbjct: 121 FLSIFWMIYHALEDDE 136

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BLAST of Cmc06g0176401.1 vs. NCBI nr
Match: XP_004147951.1 (protein cornichon homolog 4 [Cucumis sativus] >XP_011650427.1 protein cornichon homolog 4 [Cucumis sativus] >KGN55923.1 hypothetical protein Csa_010358 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 129/136 (94.85%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINP+DSASRINKVIMPEF+ MGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMS+L GPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKKQRLFKLAYLVVLL
Sbjct: 61  LFYLLTGHWGMSLLSGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLSIFWMIYHALEDDE
Sbjct: 121 FLSIFWMIYHALEDDE 136

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BLAST of Cmc06g0176401.1 vs. NCBI nr
Match: XP_038876883.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVI+PEFV++GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVILPEFVSVGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMSM+CGPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKKQRLFKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSMICGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLSIFWMIY ALEDDE
Sbjct: 121 FLSIFWMIYSALEDDE 136

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BLAST of Cmc06g0176401.1 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64
Identity = 125/136 (91.91%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMS+LCGPYIYYNVR+YLRRQ+LVDVTEIFNMLNWEKKQRLFKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLVDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLS+FWMIY+ALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

[Close]

BLAST of Cmc06g0176401.1 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.0 bits (650), Expect = 3.7e-64
Identity = 124/136 (91.18%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMS+LCGPYIYYNVR+YLRRQ+L+DVTEIFNMLNWEKKQRLFKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLS+FWMIY+ALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

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BLAST of Cmc06g0176401.1 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-54
Identity = 100/136 (73.53%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M D++ WL+SFFFLIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEF+  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           +FYLLTGHW M++LC PY+YYN  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V+ L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FL+IFWMIY AL+D E
Sbjct: 121 FLTIFWMIYSALDDYE 136

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BLAST of Cmc06g0176401.1 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.5e-47
Identity = 87/136 (63.97%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M +++ W++SF  LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE +  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           +FYL+TGHW M++LC PY+YYN  LY R+Q+L+DVTEIFN+L+WEKK+RLFKLAY+++ L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FL+IFW+IY  L+D E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

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BLAST of Cmc06g0176401.1 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-46
Identity = 85/115 (73.91%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 22  VYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSMLCGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN V++PEF+  GVLC+FYLLTGHW M++LC PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLLFLSIFWMIYHALEDDE 137
           N  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V+ LFL+IFWMIY AL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Cmc06g0176401.1 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-38
Identity = 69/134 (51.49%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DL  W++SF FL  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           L+Y+LTGHW M++L  P+++YN+RLY++R++L DVTE++N   WE+K+R++K+ ++ + +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWMIYHALED 135
           F++ +W+I+ AL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]

BLAST of Cmc06g0176401.1 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 60/138 (43.48%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 3   DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLF 62
           DL++W+VSFF  +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEF+  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLLFL 122
           +LLT HW   ++  P   Y+  LY  R+YL+DVTE+F  +++EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWM----IYHALEDDE 137
            +F +    +Y   EDD+
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

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BLAST of Cmc06g0176401.1 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLSIFWMIYHALEDDE
Sbjct: 121 FLSIFWMIYHALEDDE 136

[Close]

BLAST of Cmc06g0176401.1 vs. ExPASy TrEMBL
Match: A0A0A0L2G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036490 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.5e-66
Identity = 129/136 (94.85%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINP+DSASRINKVIMPEF+ MGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMS+L GPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKKQRLFKLAYLVVLL
Sbjct: 61  LFYLLTGHWGMSLLSGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLSIFWMIYHALEDDE
Sbjct: 121 FLSIFWMIYHALEDDE 136

[Close]

BLAST of Cmc06g0176401.1 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64
Identity = 124/136 (91.18%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMS+LCGPYIYYNVR+YLRRQ+L+DVTEIFNMLNWEKKQRLFKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLS+FWMIY+ALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

[Close]

BLAST of Cmc06g0176401.1 vs. ExPASy TrEMBL
Match: A0A6J1E6H8 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 126/136 (92.65%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEFVA+GVLC
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAIGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKK+RLFKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLSIFWMIY ALEDDE
Sbjct: 121 FLSIFWMIYSALEDDE 136

[Close]

BLAST of Cmc06g0176401.1 vs. ExPASy TrEMBL
Match: A0A6J1HL36 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.2e-64
Identity = 125/136 (91.91%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEF+A+GVLC
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKK+RLFKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FLSIFWMIY ALEDDE
Sbjct: 121 FLSIFWMIYSALEDDE 136

[Close]

BLAST of Cmc06g0176401.1 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 211.8 bits (538), Expect = 3.3e-55
Identity = 100/136 (73.53%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M D++ WL+SFFFLIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEF+  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           +FYLLTGHW M++LC PY+YYN  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V+ L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FL+IFWMIY AL+D E
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]

BLAST of Cmc06g0176401.1 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-48
Identity = 87/136 (63.97%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M +++ W++SF  LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE +  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           +FYL+TGHW M++LC PY+YYN  LY R+Q+L+DVTEIFN+L+WEKK+RLFKLAY+++ L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWMIYHALEDDE 137
           FL+IFW+IY  L+D E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]

BLAST of Cmc06g0176401.1 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 187.2 bits (474), Expect = 8.8e-48
Identity = 85/115 (73.91%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 22  VYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSMLCGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN V++PEF+  GVLC+FYLLTGHW M++LC PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLLFLSIFWMIYHALEDDE 137
           N  LY +RQ+LVDVTEIFN+LNWEKK+RLFKLAY+V+ LFL+IFWMIY AL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Cmc06g0176401.1 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 69/134 (51.49%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60
           M DL  W++SF FL  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120
           L+Y+LTGHW M++L  P+++YN+RLY++R++L DVTE++N   WE+K+R++K+ ++ + +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWMIYHALED 135
           F++ +W+I+ AL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]

BLAST of Cmc06g0176401.1 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 124.0 bits (310), Expect = 9.1e-29
Identity = 60/138 (43.48%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 3   DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLF 62
           DL++W+VSFF  +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEF+  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLLFL 122
           +LLT HW   ++  P   Y+  LY  R+YL+DVTE+F  +++EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWM----IYHALEDDE 137
            +F +    +Y   EDD+
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

The following BLAST results are available for this feature:

BLAST of Cmc06g0176401.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448916.1	6.5e-69	100.00	PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1...	[more]
XP_004147951.1	1.1e-65	94.85	protein cornichon homolog 4 [Cucumis sativus] >XP_011650427.1 protein cornichon ...	[more]
XP_038876883.1	2.2e-64	93.38	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_023539252.1	2.8e-64	91.91	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005595.1	3.7e-64	91.18	protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornic...	[more]

BLAST of Cmc06g0176401.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	4.7e-54	73.53	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	9.5e-47	63.97	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	1.2e-46	73.91	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	1.6e-38	51.49	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	1.3e-27	43.48	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Cmc06g0176401.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BLR3	3.1e-69	100.00	protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 P...	[more]
A0A0A0L2G6	5.5e-66	94.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036490 PE=3 SV=1	[more]
A0A6J1KXU1	1.8e-64	91.18	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=...	[more]
A0A6J1E6H8	4.0e-64	92.65	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 P...	[more]
A0A6J1HL36	5.2e-64	91.91	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=...	[more]

BLAST of Cmc06g0176401.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	3.3e-55	73.53	Cornichon family protein	[more]
AT1G62880.1	6.7e-48	63.97	Cornichon family protein	[more]
AT1G12340.1	8.8e-48	73.91	Cornichon family protein	[more]
AT4G12090.1	1.2e-39	51.49	Cornichon family protein	[more]
AT3G12180.1	9.1e-29	43.48	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..125 e-value: 3.3E-55 score: 199.4
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 5..125 e-value: 8.0E-40 score: 135.9
None	No IPR available	PANTHER	PTHR12290:SF39	PROTEIN CORNICHON HOMOLOG 4-LIKE	coord: 1..135
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..135

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc06g0176401	Cmc06g0176401	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0176401.1-exon	Cmc06g0176401.1-exon-CMiso1.1chr06:33230544..33230926	exon
Cmc06g0176401.1-exon	Cmc06g0176401.1-exon-CMiso1.1chr06:33231034..33231156	exon
Cmc06g0176401.1-exon	Cmc06g0176401.1-exon-CMiso1.1chr06:33232053..33232234	exon
Cmc06g0176401.1-exon	Cmc06g0176401.1-exon-CMiso1.1chr06:33233065..33233518	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0176401.1-three_prime_utr	Cmc06g0176401.1-three_prime_utr-CMiso1.1chr06:33230544..33230892	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0176401.1-cds	Cmc06g0176401.1-cds-CMiso1.1chr06:33230893..33230926	CDS
Cmc06g0176401.1-cds	Cmc06g0176401.1-cds-CMiso1.1chr06:33231034..33231156	CDS
Cmc06g0176401.1-cds	Cmc06g0176401.1-cds-CMiso1.1chr06:33232053..33232234	CDS
Cmc06g0176401.1-cds	Cmc06g0176401.1-cds-CMiso1.1chr06:33233065..33233136	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0176401.1-five_prime_utr	Cmc06g0176401.1-five_prime_utr-CMiso1.1chr06:33233137..33233518	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc06g0176401.1	Cmc06g0176401.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016020	membrane