Cmc06g0174671.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc06g0174671.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	TTF-type domain-containing protein
Location	CMiso1.1chr06: 31665395 .. 31666138 (+)
Sequence length	744
RNA-Seq Expression	Cmc06g0174671.1
Synteny	Cmc06g0174671.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTGGTCAAGATTTGTAAAGTAAGATTACAGTCAATGAGAGAGTCAGGATGGCAATCATTGTTGGATGAAGTTTCAAGTTTTTGTAATAAGCATGGTATTCTAATGCTTAAAATGGATGATGCATTTTTAGTTCGAGGGAGGCAAAGACGAAATTCTCAAGAAATCACAAATATATATCATTATCTTGTTGAGATTTTTTATGCAGTTATTGACATGCAACTTCAAGAGTTAAATAATCATTTCACTGAGAAAAGCACCGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTACTTTTGACAAACAAAAGCTCATTTGCATTGCACAATTTTATCCTAGAGATTTTTCAACTATGGAGCTTCTTATTTTTGAAGATCAGCTCCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTTGGGTTAACAAGTATTGGTGATTTTTCTCAAAAAATGGTGATAACAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTACCAGTTACAACGGCTACCGTGAAGAGGATATTTTCTGCTATGAGCATTATAAAGACTCAGTTTCGTACTCGAATGAAAGACCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCGATTTCAAAATATGAAATCTCGTAGGGGACAATTGTGA

mRNA sequence

ATGAATTTGGTCAAGATTTGTAAAGTAAGATTACAGTCAATGAGAGAGTCAGGATGGCAATCATTGTTGGATGAAGTTTCAAGTTTTTGTAATAAGCATGGTATTCTAATGCTTAAAATGGATGATGCATTTTTAGTTCGAGGGAGGCAAAGACGAAATTCTCAAGAAATCACAAATATATATCATTATCTTGTTGAGATTTTTTATGCAGTTATTGACATGCAACTTCAAGAGTTAAATAATCATTTCACTGAGAAAAGCACCGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTACTTTTGACAAACAAAAGCTCATTTGCATTGCACAATTTTATCCTAGAGATTTTTCAACTATGGAGCTTCTTATTTTTGAAGATCAGCTCCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTTGGGTTAACAAGTATTGGTGATTTTTCTCAAAAAATGGTGATAACAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTACCAGTTACAACGGCTACCGTGAAGAGGATATTTTCTGCTATGAGCATTATAAAGACTCAGTTTCGTACTCGAATGAAAGACCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCGATTTCAAAATATGAAATCTCGTAGGGGACAATTGTGA

Coding sequence (CDS)

ATGAATTTGGTCAAGATTTGTAAAGTAAGATTACAGTCAATGAGAGAGTCAGGATGGCAATCATTGTTGGATGAAGTTTCAAGTTTTTGTAATAAGCATGGTATTCTAATGCTTAAAATGGATGATGCATTTTTAGTTCGAGGGAGGCAAAGACGAAATTCTCAAGAAATCACAAATATATATCATTATCTTGTTGAGATTTTTTATGCAGTTATTGACATGCAACTTCAAGAGTTAAATAATCATTTCACTGAGAAAAGCACCGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTACTTTTGACAAACAAAAGCTCATTTGCATTGCACAATTTTATCCTAGAGATTTTTCAACTATGGAGCTTCTTATTTTTGAAGATCAGCTCCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTTGGGTTAACAAGTATTGGTGATTTTTCTCAAAAAATGGTGATAACAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTACCAGTTACAACGGCTACCGTGAAGAGGATATTTTCTGCTATGAGCATTATAAAGACTCAGTTTCGTACTCGAATGAAAGACCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCGATTTCAAAATATGAAATCTCGTAGGGGACAATTGTGA

Protein sequence

MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNIYHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPRDFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLALILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNMKSRRGQL

Homology

[Close]

BLAST of Cmc06g0174671.1 vs. NCBI nr
Match: XP_008449194.1 (PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 2.0e-92
Identity = 190/252 (75.40%), Postives = 199/252 (78.97%), Query Frame = 0


Query: 21  SLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNIYHYLV--------------- 80
           SL + +  F + HG+ M  +    LV     +N  EI  ++  +V               
Sbjct: 64  SLKEVIDGFFSLHGLSMTSLHGQALV--AIAKNHVEIAGLFLLVVNVVNVIGVSAKRQDM 123

Query: 81  ----------EIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIA 140
                     E    VIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIA
Sbjct: 124 LREKHSANTFEALNNVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIA 183

Query: 141 QFYPRDFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRL 200
           QFYPRDFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRL
Sbjct: 184 QFYPRDFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRL 243

Query: 201 LTLALILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMY 248
           LTLALILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMY
Sbjct: 244 LTLALILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMY 303

[Close]

BLAST of Cmc06g0174671.1 vs. NCBI nr
Match: XP_021829887.1 (uncharacterized protein LOC110770113 [Prunus avium])

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-83
Identity = 159/247 (64.37%), Postives = 199/247 (80.57%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M+LVKICK RLQSMR++GW SLLD+VS FC K+ I + KMDD F   GR +R +Q ITN+
Sbjct: 170 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 229

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V++F  VID+QL+ELN+ F EK+TELLLC+ACL+PSNSF+ FDK KL+ +AQFY R
Sbjct: 230 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYQR 289

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS  +L + EDQL+NYI DV S+N F  L  I D +QKMV T KDK+YPLVY LLTLAL
Sbjct: 290 DFSEHDLKLLEDQLENYIWDVSSNNQFTELKGITDLAQKMVETNKDKIYPLVYLLLTLAL 349

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           ILPV TA+V+R+FSAM+I+K + R R+ D WMNDCLVAYIE+D+F+ ID+E +M RFQNM
Sbjct: 350 ILPVATASVERVFSAMNIVKNRLRNRIGDLWMNDCLVAYIEKDIFNSIDDEVVMQRFQNM 409

Query: 241 KSRRGQL 248
           K+RRGQL
Sbjct: 410 KTRRGQL 416

[Close]

BLAST of Cmc06g0174671.1 vs. NCBI nr
Match: XP_024155975.1 (zinc finger MYM-type protein 1-like [Rosa chinensis])

HSP 1 Score: 319.7 bits (818), Expect = 2.2e-83
Identity = 153/247 (61.94%), Postives = 202/247 (81.78%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           MNLV +CK RLQ+MRESGW SLL +++ FC KH I +L MD+ F+ +G+ +RN+Q ITN+
Sbjct: 546 MNLVTVCKERLQAMRESGWDSLLAQITIFCEKHSIEVLNMDECFVAQGKSKRNAQVITNL 605

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V++FY VID QLQEL++ F EK+TELLLC++CLNP NSF+ FDK+KLI +AQ+YP+
Sbjct: 606 HHYRVQLFYTVIDNQLQELDDRFNEKNTELLLCMSCLNPRNSFSAFDKEKLIKLAQYYPQ 665

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS  +L + +DQL+NYI+D+ S+  F  L  I D ++KMV T KD  YPLVY LLTLAL
Sbjct: 666 DFSAHDLEVLDDQLENYIVDMRSNIEFFELKGITDLAKKMVQTKKDVTYPLVYLLLTLAL 725

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           ILPV TA+V+R+FSAM+I+KT+ R+RM D++MNDCL++YIE+D+F  ID+EAIM RFQNM
Sbjct: 726 ILPVATASVERVFSAMNIVKTRLRSRMGDEFMNDCLISYIEKDIFTSIDDEAIMQRFQNM 785

Query: 241 KSRRGQL 248
           KSRRGQL
Sbjct: 786 KSRRGQL 792

[Close]

BLAST of Cmc06g0174671.1 vs. NCBI nr
Match: XP_024172313.1 (zinc finger MYM-type protein 1-like [Rosa chinensis])

HSP 1 Score: 318.9 bits (816), Expect = 3.8e-83
Identity = 153/247 (61.94%), Postives = 201/247 (81.38%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           MNLV +CK RLQ+MRESGW SLL +++ FC KH I +L MD+ F+ +G+ +RN+Q ITN+
Sbjct: 546 MNLVTVCKERLQAMRESGWDSLLAQITIFCEKHSIEVLNMDECFVAQGKSKRNAQVITNL 605

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V++FY VID QLQELN+ F EK+TELLLC++CLNP NSF+ FDK+KLI +AQ+YP+
Sbjct: 606 HHYRVQLFYTVIDNQLQELNDRFNEKNTELLLCMSCLNPRNSFSAFDKEKLIKLAQYYPQ 665

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS  +  + +DQL+NYI+D+ S+  F  L  I D ++KMV T KD  YPLVY LLTLAL
Sbjct: 666 DFSAHDPEVLDDQLENYIVDMRSNIEFFELKGITDLAKKMVQTKKDVTYPLVYLLLTLAL 725

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           ILPV TA+V+R+FSAM+I+KT+ R+RM D++MNDCL++YIE+D+F  ID+EAIM RFQNM
Sbjct: 726 ILPVATASVERVFSAMNIVKTRLRSRMGDEFMNDCLISYIEKDIFTSIDDEAIMQRFQNM 785

Query: 241 KSRRGQL 248
           KSRRGQL
Sbjct: 786 KSRRGQL 792

[Close]

BLAST of Cmc06g0174671.1 vs. NCBI nr
Match: XP_021827657.1 (zinc finger MYM-type protein 1-like [Prunus avium])

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-83
Identity = 159/247 (64.37%), Postives = 198/247 (80.16%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M+LVKICK RLQSMR++GW SLLD+VS FC K+ I + KMDD F   GR +R +Q ITN+
Sbjct: 218 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 277

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V++F  VID+QL+ELN+ F EK+TELLLC+ACL+PSNSF+ FDK KL+ +AQFYPR
Sbjct: 278 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYPR 337

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS  +L + EDQL+NYI DV S+N F  L  I D +QKMV T KDK+YPLVY LLTLAL
Sbjct: 338 DFSKHDLKLLEDQLENYIWDVSSNNEFTELKGISDLAQKMVETNKDKIYPLVYLLLTLAL 397

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           IL V TA+V+R+FSAM+I+K + R RM D WMND LVAYIE+D+F+ ID+E +M RFQNM
Sbjct: 398 ILSVATASVERVFSAMNIVKNRLRNRMGDLWMNDSLVAYIEKDIFNSIDDEVVMQRFQNM 457

Query: 241 KSRRGQL 248
           K+RRGQL
Sbjct: 458 KTRRGQL 464

[Close]

BLAST of Cmc06g0174671.1 vs. ExPASy TrEMBL
Match: A0A1S3BM43 (uncharacterized protein LOC103491145 OS=Cucumis melo OX=3656 GN=LOC103491145 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 9.7e-93
Identity = 190/252 (75.40%), Postives = 199/252 (78.97%), Query Frame = 0


Query: 21  SLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNIYHYLV--------------- 80
           SL + +  F + HG+ M  +    LV     +N  EI  ++  +V               
Sbjct: 64  SLKEVIDGFFSLHGLSMTSLHGQALV--AIAKNHVEIAGLFLLVVNVVNVIGVSAKRQDM 123

Query: 81  ----------EIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIA 140
                     E    VIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIA
Sbjct: 124 LREKHSANTFEALNNVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIA 183

Query: 141 QFYPRDFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRL 200
           QFYPRDFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRL
Sbjct: 184 QFYPRDFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRL 243

Query: 201 LTLALILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMY 248
           LTLALILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMY
Sbjct: 244 LTLALILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMY 303

[Close]

BLAST of Cmc06g0174671.1 vs. ExPASy TrEMBL
Match: A0A6P5TRY7 (uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 6.3e-84
Identity = 159/247 (64.37%), Postives = 199/247 (80.57%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M+LVKICK RLQSMR++GW SLLD+VS FC K+ I + KMDD F   GR +R +Q ITN+
Sbjct: 170 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 229

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V++F  VID+QL+ELN+ F EK+TELLLC+ACL+PSNSF+ FDK KL+ +AQFY R
Sbjct: 230 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYQR 289

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS  +L + EDQL+NYI DV S+N F  L  I D +QKMV T KDK+YPLVY LLTLAL
Sbjct: 290 DFSEHDLKLLEDQLENYIWDVSSNNQFTELKGITDLAQKMVETNKDKIYPLVYLLLTLAL 349

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           ILPV TA+V+R+FSAM+I+K + R R+ D WMNDCLVAYIE+D+F+ ID+E +M RFQNM
Sbjct: 350 ILPVATASVERVFSAMNIVKNRLRNRIGDLWMNDCLVAYIEKDIFNSIDDEVVMQRFQNM 409

Query: 241 KSRRGQL 248
           K+RRGQL
Sbjct: 410 KTRRGQL 416

[Close]

BLAST of Cmc06g0174671.1 vs. ExPASy TrEMBL
Match: A0A6P5TKH2 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110768262 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.1e-83
Identity = 159/247 (64.37%), Postives = 198/247 (80.16%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M+LVKICK RLQSMR++GW SLLD+VS FC K+ I + KMDD F   GR +R +Q ITN+
Sbjct: 218 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 277

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V++F  VID+QL+ELN+ F EK+TELLLC+ACL+PSNSF+ FDK KL+ +AQFYPR
Sbjct: 278 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYPR 337

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS  +L + EDQL+NYI DV S+N F  L  I D +QKMV T KDK+YPLVY LLTLAL
Sbjct: 338 DFSKHDLKLLEDQLENYIWDVSSNNEFTELKGISDLAQKMVETNKDKIYPLVYLLLTLAL 397

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           IL V TA+V+R+FSAM+I+K + R RM D WMND LVAYIE+D+F+ ID+E +M RFQNM
Sbjct: 398 ILSVATASVERVFSAMNIVKNRLRNRMGDLWMNDSLVAYIEKDIFNSIDDEVVMQRFQNM 457

Query: 241 KSRRGQL 248
           K+RRGQL
Sbjct: 458 KTRRGQL 464

[Close]

BLAST of Cmc06g0174671.1 vs. ExPASy TrEMBL
Match: A0A2N9J031 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57563 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 160/247 (64.78%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M LV+I K RLQ MRE+GW SLLDEVS+FC  + IL+  MDD ++ RGR RR +  +TN+
Sbjct: 471 MKLVRISKERLQIMRENGWSSLLDEVSTFCGINKILVPNMDDIYVARGRSRRYTDGMTNL 530

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           + Y VE+FYA+IDMQLQELNN FTE +TELLLCV+CL+PS+ F TFDKQKLI +AQFYP 
Sbjct: 531 HFYRVELFYAIIDMQLQELNNRFTESNTELLLCVSCLSPSDFFATFDKQKLIRLAQFYPE 590

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS+ EL+I  DQL NYI DV S   F  L  I D +QKMV T K+ VYPLVY L+TLAL
Sbjct: 591 DFSSSELMILSDQLDNYIFDVRSSIEFSKLEGICDLAQKMVETKKNVVYPLVYLLVTLAL 650

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
            LPV TATV+R FSAM I+K + R+RM DQWMND L+ YIE+D+F  IDNEAIM RFQNM
Sbjct: 651 TLPVATATVERAFSAMKIVKNRLRSRMSDQWMNDSLIVYIEKDIFHSIDNEAIMQRFQNM 710

Query: 241 KSRRGQL 248
           K+RR QL
Sbjct: 711 KTRRNQL 717

[Close]

BLAST of Cmc06g0174671.1 vs. ExPASy TrEMBL
Match: A0A2N9F987 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11547 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 160/247 (64.78%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M LV+I K RLQ MRE+GW SLLDEVS+FC  + IL+  MDD ++ RGR RR +  +TN+
Sbjct: 455 MKLVRISKERLQIMRENGWSSLLDEVSTFCGINKILVPNMDDIYVARGRSRRYTDGMTNL 514

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           + Y VE+FYA+IDMQLQELNN FTE +TELLLCV+CL+PS+ F TFDKQKLI +AQFYP 
Sbjct: 515 HFYRVELFYAIIDMQLQELNNRFTESNTELLLCVSCLSPSDFFATFDKQKLIRLAQFYPE 574

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS+ EL+I  DQL NYI DV S   F  L  I D +QKMV T K+ VYPLVY L+TLAL
Sbjct: 575 DFSSSELMILSDQLDNYIFDVRSSIEFSKLEGICDLAQKMVETKKNVVYPLVYLLVTLAL 634

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
            LPV TATV+R FSAM I+K + R+RM DQWMND L+ YIE+D+F  IDNEAIM RFQNM
Sbjct: 635 TLPVATATVERAFSAMKIVKNRLRSRMSDQWMNDSLIVYIEKDIFHSIDNEAIMQRFQNM 694

Query: 241 KSRRGQL 248
           K+RR QL
Sbjct: 695 KTRRNQL 701

[Close]

BLAST of Cmc06g0174671.1 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-57
Identity = 113/247 (45.75%), Postives = 167/247 (67.61%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           ++LVK  K +LQ +R+ GW + + +VSSF  K+   MLKM++ F V  R+ R    ITN+
Sbjct: 524 ISLVKTTKCQLQKVRDDGWDAFMAKVSSFSEKNNTGMLKMEEEF-VDSRRPRKKTGITNL 583

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V+ FY V+DMQLQE N+ F E ++ELL+C++ L+P +SF  FDK  L+ + +FYP 
Sbjct: 584 HHYKVDCFYTVLDMQLQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPD 643

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS +E    + QL+ Y+ +V +D  F  L  +GD ++ MV T K   +PLVYRLL ++L
Sbjct: 644 DFSFVERRSLDHQLEIYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSL 703

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           ILPV TATV+R FSAM+ +KT  R R+ D +++DCLV +IE+   + + NE+++ RFQ+M
Sbjct: 704 ILPVATATVERCFSAMNFVKTTLRNRIGDMFLSDCLVCFIEKQALNTVTNESVIKRFQDM 763

Query: 241 KSRRGQL 248
             RR  L
Sbjct: 764 SERRVHL 769

[Close]

BLAST of Cmc06g0174671.1 vs. TAIR 10
Match: AT3G29765.1 (General transcription factor 2-related zinc finger protein )

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-57
Identity = 115/247 (46.56%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           ++LVK  K +LQ +R+ GW + + EVSSF  K    MLKM++ F V  R+ R    ITN+
Sbjct: 291 ISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKTNTGMLKMEEEF-VDSRRPRKKTGITNL 350

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V+ FY V+DMQLQE N+ F E ++ELL+C++ L+P +SF  FDK  L+ + +FYP 
Sbjct: 351 HHYKVDCFYTVLDMQLQEFNDCFDELNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPD 410

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DFS +E    + QL+ Y+ +V +D  F  L  +GD ++ MV T K   +PLVYRLL L+L
Sbjct: 411 DFSFVERRSLDHQLEIYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSL 470

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
           ILPV TATV R FSAM+ +KT  R R  D +++DCLV +IE+ + + + NE+++ RFQ+M
Sbjct: 471 ILPVATATVVRCFSAMNFVKTTLRNRFGDVFLSDCLVCFIEKQVLNTVTNESVIKRFQDM 530

Query: 241 KSRRGQL 248
             RR  L
Sbjct: 531 SERRVHL 536

[Close]

BLAST of Cmc06g0174671.1 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 178.3 bits (451), Expect = 7.4e-45
Identity = 94/196 (47.96%), Postives = 132/196 (67.35%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           ++LVK  K +LQ +R+ GW + + EVSSF  K+   MLKM++ F V  R+ R    ITN+
Sbjct: 468 ISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKNNTAMLKMEEEF-VDSRRPRKKSGITNL 527

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
           +HY V+ FY V+DMQLQE N+ F E ++ELL+C++ L+P +SF  FDK  L+ + +FYP 
Sbjct: 528 HHYKVDCFYTVLDMQLQEFNDRFDEVNSELLICMSSLSPIDSFCQFDKSMLVRLTEFYPD 587

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           +FS +E    + QL+ Y+ +V +D  F  L   GD ++ MV T K   +PLVYRLL L+L
Sbjct: 588 EFSFVERRSLDHQLEIYLDNVKNDERFTDLKCFGDLARVMVETRKHLSHPLVYRLLKLSL 647

Query: 181 ILPVTTATVKRIFSAM 197
           ILPV TATV+R FSAM
Sbjct: 648 ILPVATATVERCFSAM 662

[Close]

BLAST of Cmc06g0174671.1 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 87/243 (35.80%), Postives = 134/243 (55.14%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M+LVK  K  L ++R+ GW S L+EV                                  
Sbjct: 395 MSLVKSTKQHLFNLRDDGWDSFLNEVF--------------------------------- 454

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
                          L E N+ F E +TELL CVA L+P++ F  FD+ K++ +A+FYP+
Sbjct: 455 ---------------LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQ 514

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DF+ ++    E QL  YI ++  D+ F  L S+GD ++ M+ T K   +P VYRLL + L
Sbjct: 515 DFTRVDWRSLEHQLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVL 574

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
            LP+ TATV+R FSA +++KT  R R+ DQ++ND +V  ++R+LFD + N+ ++ RFQ+M
Sbjct: 575 TLPIATATVERCFSA-TVVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSM 588

Query: 241 KSR 244
           ++R
Sbjct: 635 ENR 588

[Close]

BLAST of Cmc06g0174671.1 vs. TAIR 10
Match: AT2G06541.2 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 87/243 (35.80%), Postives = 134/243 (55.14%), Query Frame = 0


Query: 1   MNLVKICKVRLQSMRESGWQSLLDEVSSFCNKHGILMLKMDDAFLVRGRQRRNSQEITNI 60
           M+LVK  K  L ++R+ GW S L+EV                                  
Sbjct: 367 MSLVKSTKQHLFNLRDDGWDSFLNEVF--------------------------------- 426

Query: 61  YHYLVEIFYAVIDMQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPR 120
                          L E N+ F E +TELL CVA L+P++ F  FD+ K++ +A+FYP+
Sbjct: 427 ---------------LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQ 486

Query: 121 DFSTMELLIFEDQLQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLAL 180
           DF+ ++    E QL  YI ++  D+ F  L S+GD ++ M+ T K   +P VYRLL + L
Sbjct: 487 DFTRVDWRSLEHQLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVL 546

Query: 181 ILPVTTATVKRIFSAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNM 240
            LP+ TATV+R FSA +++KT  R R+ DQ++ND +V  ++R+LFD + N+ ++ RFQ+M
Sbjct: 547 TLPIATATVERCFSA-TVVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSM 560

Query: 241 KSR 244
           ++R
Sbjct: 607 ENR 560

The following BLAST results are available for this feature:

BLAST of Cmc06g0174671.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449194.1	2.0e-92	75.40	PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo]	[more]
XP_021829887.1	1.3e-83	64.37	uncharacterized protein LOC110770113 [Prunus avium]	[more]
XP_024155975.1	2.2e-83	61.94	zinc finger MYM-type protein 1-like [Rosa chinensis]	[more]
XP_024172313.1	3.8e-83	61.94	zinc finger MYM-type protein 1-like [Rosa chinensis]	[more]
XP_021827657.1	6.4e-83	64.37	zinc finger MYM-type protein 1-like [Prunus avium]	[more]

BLAST of Cmc06g0174671.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0174671.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BM43	9.7e-93	75.40	uncharacterized protein LOC103491145 OS=Cucumis melo OX=3656 GN=LOC103491145 PE=...	[more]
A0A6P5TRY7	6.3e-84	64.37	uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE...	[more]
A0A6P5TKH2	3.1e-83	64.37	zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110768262 PE=...	[more]
A0A2N9J031	5.9e-82	64.78	TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57563...	[more]
A0A2N9F987	5.9e-82	64.78	TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11547...	[more]

BLAST of Cmc06g0174671.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19260.1	1.3e-57	45.75	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT3G29765.1	2.9e-57	46.56	General transcription factor 2-related zinc finger protein	[more]
AT4G09660.1	7.4e-45	47.96	CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Ara...	[more]
AT2G06541.1	2.0e-34	35.80	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT2G06541.2	2.0e-34	35.80	TTF-type zinc finger protein with HAT dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 166..224 e-value: 1.3E-7 score: 31.3
None	No IPR available	PANTHER	PTHR11697:SF107	TRANSCRIPTION FACTOR-LIKE ZINC FINGER PROTEIN, PUTATIVE-RELATED	coord: 2..238
None	No IPR available	PANTHER	PTHR11697	GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN	coord: 2..238
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 166..222

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc06g0174671	Cmc06g0174671	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0174671.1-exon	Cmc06g0174671.1-exon-CMiso1.1chr06:31665395..31666138	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0174671.1-cds	Cmc06g0174671.1-cds-CMiso1.1chr06:31665395..31666138	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc06g0174671.1	Cmc06g0174671.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0046983	protein dimerization activity