Cmc05g0138891.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc05g0138891.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr05: 23470117 .. 23470500 (-)
Sequence length	384
RNA-Seq Expression	Cmc05g0138891.1
Synteny	Cmc05g0138891.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTGGCATTGCAAATTAGGCCACATGTCTGAACAAGGATTAAAAGTTCTTGTAGAGCAAAATCTACTCCCAGGGCTCACTAAGGTGTCTTTACCCTTTTGTAAGCATTGTATTACAAGTAAGCAACACAGATTGAAGTTCAATACATCAAGTTCTAGAAGTAAAGTGATTCTAGAACTAGTTAATTCTGATGTATGGCAATCACCGGTTACATCTCTAGGAGGAGCAAGGTACTTTGTGTCCTTTATAGATGATTTCTCCAGAAGGTGTTGGGTGTATCCTATTAAGAAGAAGGCAGATGTATGTTCCATCTTCAAAGTATTCAAAGCGCAAGTGGAACTTCAATTTGGTAAAAAGATCAAGTGCTTTACGAACAGATAA

mRNA sequence

ATGATGTGGCATTGCAAATTAGGCCACATGTCTGAACAAGGATTAAAAGTTCTTGTAGAGCAAAATCTACTCCCAGGGCTCACTAAGGTGTCTTTACCCTTTTGTAAGCATTGTATTACAAGTAAGCAACACAGATTGAAGTTCAATACATCAAGTTCTAGAAGTAAAGTGATTCTAGAACTAGTTAATTCTGATGTATGGCAATCACCGGTTACATCTCTAGGAGGAGCAAGGTACTTTGTGTCCTTTATAGATGATTTCTCCAGAAGGTGTTGGGTGTATCCTATTAAGAAGAAGGCAGATGTATGTTCCATCTTCAAAGTATTCAAAGCGCAAGTGGAACTTCAATTTGGTAAAAAGATCAAGTGCTTTACGAACAGATAA

Coding sequence (CDS)

ATGATGTGGCATTGCAAATTAGGCCACATGTCTGAACAAGGATTAAAAGTTCTTGTAGAGCAAAATCTACTCCCAGGGCTCACTAAGGTGTCTTTACCCTTTTGTAAGCATTGTATTACAAGTAAGCAACACAGATTGAAGTTCAATACATCAAGTTCTAGAAGTAAAGTGATTCTAGAACTAGTTAATTCTGATGTATGGCAATCACCGGTTACATCTCTAGGAGGAGCAAGGTACTTTGTGTCCTTTATAGATGATTTCTCCAGAAGGTGTTGGGTGTATCCTATTAAGAAGAAGGCAGATGTATGTTCCATCTTCAAAGTATTCAAAGCGCAAGTGGAACTTCAATTTGGTAAAAAGATCAAGTGCTTTACGAACAGATAA

Protein sequence

MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILELVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKKIKCFTNR

Homology

[Close]

BLAST of Cmc05g0138891.1 vs. NCBI nr
Match: TYK16527.1 (hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           MMWH KLGHMSEQGLK  VEQNLLP LTKVSLPFC+HC+TSKQHRLKFNTSSSRSK+ILE
Sbjct: 339 MMWHRKLGHMSEQGLKFFVEQNLLPELTKVSLPFCEHCVTSKQHRLKFNTSSSRSKMILE 398

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+ DVWQS VTSLGGARYFV FIDD+S+RCWVYPIKKK DV S+FKVFK QVELQ+GKK
Sbjct: 399 LVHYDVWQSLVTSLGGARYFVFFIDDYSKRCWVYPIKKKTDVYSVFKVFKVQVELQYGKK 458

Query: 121 IKC 124
           IKC
Sbjct: 459 IKC 461

[Close]

BLAST of Cmc05g0138891.1 vs. NCBI nr
Match: KAE8718737.1 (hypothetical protein F3Y22_tig00109992pilonHSYRG00051 [Hibiscus syriacus])

HSP 1 Score: 217.2 bits (552), Expect = 7.9e-53
Identity = 101/124 (81.45%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1    MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
            M+WH KLGHMSEQG+KVLVEQ LLPGLTKVSLP C+HCITSKQHRLKFNTS+SR K +LE
Sbjct: 1826 MLWHQKLGHMSEQGMKVLVEQKLLPGLTKVSLPLCEHCITSKQHRLKFNTSNSRGKSVLE 1885

Query: 61   LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
            LV+SDVWQ+PVTSLGGA+YFVSFIDD+SRRCWV+PIKKK+DV S FK FKA+VEL  G K
Sbjct: 1886 LVHSDVWQAPVTSLGGAKYFVSFIDDYSRRCWVHPIKKKSDVFSTFKNFKARVELDSGNK 1945

Query: 121  IKCF 125
            IKCF
Sbjct: 1946 IKCF 1949

[Close]

BLAST of Cmc05g0138891.1 vs. NCBI nr
Match: KAE8688623.1 (hypothetical protein F3Y22_tig00110962pilonHSYRG00058 [Hibiscus syriacus])

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 100/124 (80.65%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           M+WH KLGHMSEQG+KVLVEQ LLP LTKVSLP C+HCITSKQHRLKFNTS+SR K++LE
Sbjct: 493 MLWHQKLGHMSEQGMKVLVEQKLLPSLTKVSLPLCEHCITSKQHRLKFNTSNSRGKIVLE 552

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+SDVWQ+PVTSLGGA+YFVSFIDD+SRRCWV+PIKKK+DV S FK FKA+VEL  G K
Sbjct: 553 LVHSDVWQAPVTSLGGAKYFVSFIDDYSRRCWVHPIKKKSDVFSTFKNFKARVELDSGNK 612

Query: 121 IKCF 125
           IKCF
Sbjct: 613 IKCF 616

[Close]

BLAST of Cmc05g0138891.1 vs. NCBI nr
Match: KAE8670544.1 (hypothetical protein F3Y22_tig00112127pilonHSYRG00101 [Hibiscus syriacus])

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 99/124 (79.84%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           M+WH KLGHMSEQG+KVLVEQ LLPGLTK+SLP C+HCITSKQHRLKFNTS+SR K +LE
Sbjct: 355 MLWHQKLGHMSEQGMKVLVEQKLLPGLTKISLPLCEHCITSKQHRLKFNTSNSRGKNVLE 414

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+SDVWQ+PVTS+G A+YFVSFIDD+SRRCWVYPIKKK+DV S FK+FKA+VEL  G K
Sbjct: 415 LVHSDVWQAPVTSIGRAKYFVSFIDDYSRRCWVYPIKKKSDVFSTFKIFKARVELDSGNK 474

Query: 121 IKCF 125
           IKCF
Sbjct: 475 IKCF 478

[Close]

BLAST of Cmc05g0138891.1 vs. NCBI nr
Match: KAA0044949.1 (hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           MMWH KLGHMSE+GLKVLVE+NLLP LTKVSLPF +HC+TSKQHRLKFNTSSSRSK+IL 
Sbjct: 339 MMWHRKLGHMSEKGLKVLVEKNLLPELTKVSLPFYEHCVTSKQHRLKFNTSSSRSKMILL 398

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+ DVWQS VTSLGGA YFV FIDD+S+RCWVYPIKKK +VCS+FKVFK QVELQ+GKK
Sbjct: 399 LVHYDVWQSLVTSLGGASYFVFFIDDYSKRCWVYPIKKKTNVCSVFKVFKVQVELQYGKK 458

Query: 121 IKC 124
           IKC
Sbjct: 459 IKC 461

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-25
Identity = 55/122 (45.08%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 2   MWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILEL 61
           +WH ++GHMSE+GL++L +++L+      ++  C +C+  KQHR+ F TSS R   IL+L
Sbjct: 424 LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 483

Query: 62  VNSDV-WQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 121
           V SDV     + S+GG +YFV+FIDD SR+ WVY +K K  V  +F+ F A VE + G+K
Sbjct: 484 VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 543

Query: 122 IK 123
           +K
Sbjct: 544 LK 545

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 3   WHCKLGHMSEQGLKVLVEQNLLPGLT-KVSLPFCKHCITSKQHRLKFNTSSSRSKVILEL 62
           WH +LGH S   L  ++  + LP L     L  C  C  +K H++ F+ S+  S   LE 
Sbjct: 446 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEY 505

Query: 63  VNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKKI 122
           + SDVW SP+ S+   RY+V F+D F+R  W+YP+K+K+ V   F +FK+ VE +F  +I
Sbjct: 506 IYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRI 565

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.1e-16
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 3   WHCKLGHMSEQGLKVLVEQNLLPGLT-KVSLPFCKHCITSKQHRLKFNTSSSRSKVILEL 62
           WH +LGH +   L  ++    L  L        C  C+ +K +++ F+ S+  S   LE 
Sbjct: 467 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 526

Query: 63  VNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKKI 122
           + SDVW SP+ S    RY+V F+D F+R  W+YP+K+K+ V   F  FK  +E +F  +I
Sbjct: 527 IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 586

Query: 123 KCF 125
             F
Sbjct: 587 GTF 589

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11
Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 0


Query: 2   MWHCKLGHMSEQGL------KVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRS 61
           +WH + GH+S+  L       +  +Q+LL  L ++S   C+ C+  KQ RL F     ++
Sbjct: 417 LWHERFGHISDGKLLEIKRKNMFSDQSLLNNL-ELSCEICEPCLNGKQARLPFKQLKDKT 476

Query: 62  --KVILELVNSDVWQSPVT--SLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKA 121
             K  L +V+SDV   P+T  +L    YFV F+D F+  C  Y IK K+DV S+F+ F A
Sbjct: 477 HIKRPLFVVHSDVC-GPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVA 536

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy Swiss-Prot
Match: P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 2   MWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILEL 61
           +WH +L HMS++G+++LV++  L      SL FC+ CI  K HR+ F+T    +K  L+ 
Sbjct: 71  LWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDY 130

Query: 62  VNSDVWQSPVTSL 75
           V+SD+W +P   L
Sbjct: 131 VHSDLWGAPSVPL 143

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy TrEMBL
Match: A0A5D3CXA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003420 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.0e-55
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           MMWH KLGHMSEQGLK  VEQNLLP LTKVSLPFC+HC+TSKQHRLKFNTSSSRSK+ILE
Sbjct: 339 MMWHRKLGHMSEQGLKFFVEQNLLPELTKVSLPFCEHCVTSKQHRLKFNTSSSRSKMILE 398

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+ DVWQS VTSLGGARYFV FIDD+S+RCWVYPIKKK DV S+FKVFK QVELQ+GKK
Sbjct: 399 LVHYDVWQSLVTSLGGARYFVFFIDDYSKRCWVYPIKKKTDVYSVFKVFKVQVELQYGKK 458

Query: 121 IKC 124
           IKC
Sbjct: 459 IKC 461

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy TrEMBL
Match: A0A6A3BRT0 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00109992pilonHSYRG00051 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.8e-53
Identity = 101/124 (81.45%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1    MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
            M+WH KLGHMSEQG+KVLVEQ LLPGLTKVSLP C+HCITSKQHRLKFNTS+SR K +LE
Sbjct: 1826 MLWHQKLGHMSEQGMKVLVEQKLLPGLTKVSLPLCEHCITSKQHRLKFNTSNSRGKSVLE 1885

Query: 61   LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
            LV+SDVWQ+PVTSLGGA+YFVSFIDD+SRRCWV+PIKKK+DV S FK FKA+VEL  G K
Sbjct: 1886 LVHSDVWQAPVTSLGGAKYFVSFIDDYSRRCWVHPIKKKSDVFSTFKNFKARVELDSGNK 1945

Query: 121  IKCF 125
            IKCF
Sbjct: 1946 IKCF 1949

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy TrEMBL
Match: A0A6A2ZAL9 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110962pilonHSYRG00058 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.0e-53
Identity = 100/124 (80.65%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           M+WH KLGHMSEQG+KVLVEQ LLP LTKVSLP C+HCITSKQHRLKFNTS+SR K++LE
Sbjct: 493 MLWHQKLGHMSEQGMKVLVEQKLLPSLTKVSLPLCEHCITSKQHRLKFNTSNSRGKIVLE 552

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+SDVWQ+PVTSLGGA+YFVSFIDD+SRRCWV+PIKKK+DV S FK FKA+VEL  G K
Sbjct: 553 LVHSDVWQAPVTSLGGAKYFVSFIDDYSRRCWVHPIKKKSDVFSTFKNFKARVELDSGNK 612

Query: 121 IKCF 125
           IKCF
Sbjct: 613 IKCF 616

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy TrEMBL
Match: A0A6A2YDU0 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112127pilonHSYRG00101 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.0e-53
Identity = 99/124 (79.84%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           M+WH KLGHMSEQG+KVLVEQ LLPGLTK+SLP C+HCITSKQHRLKFNTS+SR K +LE
Sbjct: 355 MLWHQKLGHMSEQGMKVLVEQKLLPGLTKISLPLCEHCITSKQHRLKFNTSNSRGKNVLE 414

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+SDVWQ+PVTS+G A+YFVSFIDD+SRRCWVYPIKKK+DV S FK+FKA+VEL  G K
Sbjct: 415 LVHSDVWQAPVTSIGRAKYFVSFIDDYSRRCWVYPIKKKSDVFSTFKIFKARVELDSGNK 474

Query: 121 IKCF 125
           IKCF
Sbjct: 475 IKCF 478

[Close]

BLAST of Cmc05g0138891.1 vs. ExPASy TrEMBL
Match: A0A5A7TUN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002510 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.6e-53
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MMWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILE 60
           MMWH KLGHMSE+GLKVLVE+NLLP LTKVSLPF +HC+TSKQHRLKFNTSSSRSK+IL 
Sbjct: 339 MMWHRKLGHMSEKGLKVLVEKNLLPELTKVSLPFYEHCVTSKQHRLKFNTSSSRSKMILL 398

Query: 61  LVNSDVWQSPVTSLGGARYFVSFIDDFSRRCWVYPIKKKADVCSIFKVFKAQVELQFGKK 120
           LV+ DVWQS VTSLGGA YFV FIDD+S+RCWVYPIKKK +VCS+FKVFK QVELQ+GKK
Sbjct: 399 LVHYDVWQSLVTSLGGASYFVFFIDDYSKRCWVYPIKKKTNVCSVFKVFKVQVELQYGKK 458

Query: 121 IKC 124
           IKC
Sbjct: 459 IKC 461

[Close]

BLAST of Cmc05g0138891.1 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.3e-12
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 2   MWHCKLGHMSEQGLKVLVEQNLLPGLTKVSLPFCKHCITSKQHRLKFNTSSSRSKVILEL 61
           +WH +L HMS++G+++LV++  L      SL FC+ CI  K HR+ F+T    +K  L+ 
Sbjct: 71  LWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDY 130

Query: 62  VNSDVWQSPVTSL 75
           V+SD+W +P   L
Sbjct: 131 VHSDLWGAPSVPL 143

The following BLAST results are available for this feature:

BLAST of Cmc05g0138891.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK16527.1	1.4e-54	85.37	hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa]	[more]
KAE8718737.1	7.9e-53	81.45	hypothetical protein F3Y22_tig00109992pilonHSYRG00051 [Hibiscus syriacus]	[more]
KAE8688623.1	1.0e-52	80.65	hypothetical protein F3Y22_tig00110962pilonHSYRG00058 [Hibiscus syriacus]	[more]
KAE8670544.1	1.0e-52	79.84	hypothetical protein F3Y22_tig00112127pilonHSYRG00101 [Hibiscus syriacus]	[more]
KAA0044949.1	1.8e-52	82.93	hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0138891.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.6e-25	45.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	1.2e-19	39.17	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	8.1e-16	34.96	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.2e-11	36.15	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P93293	1.0e-10	39.73	Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc05g0138891.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXA6	7.0e-55	85.37	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6A3BRT0	3.8e-53	81.45	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00109992pilon...	[more]
A0A6A2ZAL9	5.0e-53	80.65	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110962pilon...	[more]
A0A6A2YDU0	5.0e-53	79.84	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112127pilon...	[more]
A0A5A7TUN0	8.6e-53	82.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cmc05g0138891.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00300.1	7.3e-12	39.73	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 1..43 e-value: 2.6E-12 score: 46.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 60..125 e-value: 1.9E-7 score: 33.0
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 3..122
None	No IPR available	PANTHER	PTHR11439:SF324	RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 3..122
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 56..124

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc05g0138891	Cmc05g0138891	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc05g0138891.1-exon	Cmc05g0138891.1-exon-CMiso1.1chr05:23470117..23470500	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc05g0138891.1-cds	Cmc05g0138891.1-cds-CMiso1.1chr05:23470117..23470500	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc05g0138891.1	Cmc05g0138891.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0045017	glycerolipid biosynthetic process
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0006413	translational initiation
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0004714	transmembrane receptor protein tyrosine kinase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0004144	diacylglycerol O-acyltransferase activity
molecular_function	GO:0003777	microtubule motor activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0016298	lipase activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008270	zinc ion binding