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Cmc05g0128621.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCATCTTTAGCACTTGGATTCTCAATGTTCTTGTTGCTACCCATTAGCTTACATGCCACGGATGAATTGATCTCACTTTTACCAGAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGATCTAGGAGTTAATGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCAAATGTCTGGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACAATTTATGACTTTAAAAGGGATGGAAAGACTTGTACTAATTGCAGATGGCTCTTTATGCAAGTGGCCCATGTTTGCAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGA ATGACTTCATCTTTAGCACTTGGATTCTCAATGTTCTTGTTGCTACCCATTAGCTTACATGCCACGGATGAATTGATCTCACTTTTACCAGAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGATCTAGGAGTTAATGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCAAATGTCTGGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACAATTTATGACTTTAAAAGGGATGGAAAGACTTGTACTAATTGCAGATGGCTCTTTATGCAAGTGGCCCATGTTTGCAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGA ATGACTTCATCTTTAGCACTTGGATTCTCAATGTTCTTGTTGCTACCCATTAGCTTACATGCCACGGATGAATTGATCTCACTTTTACCAGAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGATCTAGGAGTTAATGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCAAATGTCTGGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACAATTTATGACTTTAAAAGGGATGGAAAGACTTGTACTAATTGCAGATGGCTCTTTATGCAAGTGGCCCATGTTTGCAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGA MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLFMQVAHVCNTLKPLLLAFLGTRMLQS Homology
BLAST of Cmc05g0128621.1 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 2.8e-59 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 231.5 bits (589), Expect = 4.5e-57 Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51 Identity = 98/103 (95.15%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-47 Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. NCBI nr
Match: KAA0046083.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 153.3 bits (386), Expect = 1.5e-33 Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.2e-19 Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.3e-14 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.4e-13 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10 Identity = 37/89 (41.57%), Postives = 47/89 (52.81%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 9.5e-10 Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.2e-57 Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51 Identity = 98/103 (95.15%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47 Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. ExPASy TrEMBL
Match: A0A5A7TR91 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00040 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 7.5e-34 Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20 Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 79.3 bits (194), Expect = 2.6e-15 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 78.6 bits (192), Expect = 4.5e-15 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14 Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Cmc05g0128621.1 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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