Cmc04g0118191.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0118191.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Location	CMiso1.1chr04: 34993068 .. 34994374 (+)
Sequence length	625
RNA-Seq Expression	Cmc04g0118191.1
Synteny	Cmc04g0118191.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGGGAAGGGAGAACAGAGGAAAACTTCGGACCTTACATAAAAGTGAAAAAAGAAAAACAGAGTCCCTCACTTTTCTTCTCTCTGTTCTTCTTTTTCTTTTTCCTTTTACCCTTTTTTTTCCACTCTCAGTTCATTTCTGTTCTGTTCAGGGAGCATTCACAAATACCCACTTCCAAAATCAACCTATTACAGGCTTTGTTTCTGTTTCCACTCCTAAAACTTTCTTTAACTCAATCGGGTCATATCAAGGAACACAAATGGAGGGTTTGATTATGAATCATGAAATGAAGCCGCTATCTAAGTTCAGGAGGATTTGTGTGTTCTGTGGTAGTAGTCAAGGCAAAAAGAGAAGCTACCAGGACTCCGCCATTGAACTTGGCAAGGAATTGGTAAAAAAAGATAAAATCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTTTTTACTCTATTTTCGATCCATTTCCTATTTCTCTGTTCAAATGATTATTTGGGGTGTTTTGTTTTTCATGTTGCTAGAGATTGTTCTGCATTTCTTTCCAAATGTTTTGGTGAACTTTATGTGTATACTGTTTGTTTTGAATATTTATGATCGAATTAATAAATCCTTTGTTTTCTTTGTTTTCCATTGACGTTCAGTTGTGATGTCTTGTGAGTGTGTTCACAACGTGTTTGTGATTATGCTTGATCATGACCCTTTACTTATTTTAACTAATATATTCTTCAACTTGATATTTCGTCTCCCGTTTCGCATCAGAAGCTTAAATTGCAAAGCAAATGCATGAATATCTCAGTTGGGTTACGGTTTGTTTCTTCTGAAATTTTATCCAAATGGGCTTCTCATACATACATTCAAAGTAAAAGGATAGAATCCCATTTCGTAAAATGAAACTCTCGAGTCATTTGAGATGATGAGTTTGGTTTTTGATGTTGTTTTTAAGGTTTCGAGGAACATTGATCTGGTCTACGGTGGGGGCAGCATTGGCCTGATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGGTATGCCCACATTTTTTTTTAATTACTTCCATTGGCCCCTTTAAGGTTGTTTTTATGATTCTATTTTTGGGTTTCTTCACCATTACAAGTTTTCTACTGTACTGACTTTTGTCGTGTTACTGTTCTGGTCCAGAGTTATACCCAAGACACTCATGCCTCGAGAGGTATGTCCGTTAACCTAGCAGTCTCATAAAGTTTTCAACCTTTTTTCTCTACTTATTTAGTTATATTAAAATAAAGTACTCTTCTTCTTTCTTCTTCATTAATC

mRNA sequence

AGAAGGGAAGGGAGAACAGAGGAAAACTTCGGACCTTACATAAAAGTGAAAAAAGAAAAACAGAGTCCCTCACTTTTCTTCTCTCTGTTCTTCTTTTTCTTTTTCCTTTTACCCTTTTTTTTCCACTCTCAGTTCATTTCTGTTCTGTTCAGGGAGCATTCACAAATACCCACTTCCAAAATCAACCTATTACAGGCTTTGTTTCTGTTTCCACTCCTAAAACTTTCTTTAACTCAATCGGGTCATATCAAGGAACACAAATGGAGGGTTTGATTATGAATCATGAAATGAAGCCGCTATCTAAGTTCAGGAGGATTTGTGTGTTCTGTGGTAGTAGTCAAGGCAAAAAGAGAAGCTACCAGGACTCCGCCATTGAACTTGGCAAGGAATTGGTTTCGAGGAACATTGATCTGGTCTACGGTGGGGGCAGCATTGGCCTGATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGCCTCGAGAGGTATGTCCGTTAACCTAGCAGTCTCATAAAGTTTTCAACCTTTTTTCTCTACTTATTTAGTTATATTAAAATAAAGTACTCTTCTTCTTTCTTCTTCATTAATC

Coding sequence (CDS)

ATGGAGGGTTTGATTATGAATCATGAAATGAAGCCGCTATCTAAGTTCAGGAGGATTTGTGTGTTCTGTGGTAGTAGTCAAGGCAAAAAGAGAAGCTACCAGGACTCCGCCATTGAACTTGGCAAGGAATTGGTTTCGAGGAACATTGATCTGGTCTACGGTGGGGGCAGCATTGGCCTGATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGCCTCGAGAGGTATGTCCGTTAACCTAG

Protein sequence

MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPREVCPLT

Homology

[Close]

BLAST of Cmc04g0118191.1 vs. NCBI nr
Match: NP_001292681.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucumis sativus] >AGE00883.1 lysine decarboxylase [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-41
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. NCBI nr
Match: KGN58962.1 (hypothetical protein Csa_002194 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-41
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. NCBI nr
Match: XP_008442685.1 (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo] >KAA0044008.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo var. makuwa] >TYK25132.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-41
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. NCBI nr
Match: XP_038903711.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Benincasa hispida])

HSP 1 Score: 173.3 bits (438), Expect = 9.5e-40
Identity = 83/88 (94.32%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLI+NHEMKP S+FRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIVNHEMKPQSRFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGL+SQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLISQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. NCBI nr
Match: XP_023528344.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.2 bits (409), Expect = 2.2e-36
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEG+I NHEMKP SKFRRICVFCGSSQGKK+SYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGVISNHEMKP-SKFRRICVFCGSSQGKKKSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLM  E+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMSPEL 87

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 8.1e-34
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 14 SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
          SKFRRICVFCGSSQGKK SYQD+A++LG ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR
Sbjct: 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 70

Query: 74 HVIGVIPKTLMPREV 89
          HVIG+IPKTLMPRE+
Sbjct: 71 HVIGIIPKTLMPREL 85

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-33
Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 6  MNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVS 65
          +N+E    SKF RICVFCGSSQGKK SYQD+A++LG ELV RNIDLVYGGGSIGLMGLVS
Sbjct: 3  VNNETMQKSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVS 62

Query: 66 QAVHDGGRHVIGVIPKTLMPREV 89
          QAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 63 QAVHDGGRHVIGVIPKTLMPREL 85

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-33
Identity = 66/75 (88.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 14 SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
          S+FRRICVFCGSSQGKK+SYQD+A+ELGKELV+RNIDLVYGGGS+GLMGLVSQAV++GGR
Sbjct: 25 SRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDLVYGGGSVGLMGLVSQAVYNGGR 84

Query: 74 HVIGVIPKTLMPREV 89
          HVIGVIPKTLMPRE+
Sbjct: 85 HVIGVIPKTLMPREI 99

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.0e-33
Identity = 65/75 (86.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 14 SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
          S+FRR+CVFCGSS GKK+ YQD+AIELGKELV+RNIDLVYGGGS+GLMGLVSQAVH+GGR
Sbjct: 18 SRFRRVCVFCGSSHGKKKIYQDAAIELGKELVARNIDLVYGGGSVGLMGLVSQAVHNGGR 77

Query: 74 HVIGVIPKTLMPREV 89
          HVIGVIPKTLMPRE+
Sbjct: 78 HVIGVIPKTLMPREI 92

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy Swiss-Prot
Match: Q5ZC82 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica OX=39947 GN=LOG PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-31
Identity = 63/75 (84.00%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 14  SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
           S+FRRICV+CGS++G+K SYQD+A+ELGKELV R IDLVYGGGSIGLMGLVS AVHDGGR
Sbjct: 33  SRFRRICVYCGSAKGRKASYQDAAVELGKELVERGIDLVYGGGSIGLMGLVSHAVHDGGR 92

Query: 74  HVIGVIPKTLMPREV 89
           HVIGVIPK+LMPREV
Sbjct: 93  HVIGVIPKSLMPREV 107

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy TrEMBL
Match: A0A5D3DNN0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002570 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy TrEMBL
Match: A0A0A0LE04 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G739570 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy TrEMBL
Match: L7YK77 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy TrEMBL
Match: A0A1S3B715 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103486483 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60
          MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL
Sbjct: 1  MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGL 60

Query: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREV 89
          MGLVSQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 61 MGLVSQAVHDGGRHVIGVIPKTLMPREL 88

[Close]

BLAST of Cmc04g0118191.1 vs. ExPASy TrEMBL
Match: A0A6J1CV24 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111015045 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 5  IMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLV 64
          I+NHEMK  SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLV
Sbjct: 3  IVNHEMKQ-SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLV 62

Query: 65 SQAVHDGGRHVIGVIPKTLMPREV 89
          SQAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 63 SQAVHDGGRHVIGVIPKTLMPREL 85

[Close]

BLAST of Cmc04g0118191.1 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein )

HSP 1 Score: 144.1 bits (362), Expect = 5.8e-35
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 14 SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
          SKFRRICVFCGSSQGKK SYQD+A++LG ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR
Sbjct: 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 70

Query: 74 HVIGVIPKTLMPREV 89
          HVIG+IPKTLMPRE+
Sbjct: 71 HVIGIIPKTLMPREL 85

[Close]

BLAST of Cmc04g0118191.1 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein )

HSP 1 Score: 144.1 bits (362), Expect = 5.8e-35
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 14 SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
          SKFRRICVFCGSSQGKK SYQD+A++LG ELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR
Sbjct: 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 70

Query: 74 HVIGVIPKTLMPREV 89
          HVIG+IPKTLMPRE+
Sbjct: 71 HVIGIIPKTLMPREL 85

[Close]

BLAST of Cmc04g0118191.1 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-34
Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 6  MNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVS 65
          +N+E    SKF RICVFCGSSQGKK SYQD+A++LG ELV RNIDLVYGGGSIGLMGLVS
Sbjct: 3  VNNETMQKSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVS 62

Query: 66 QAVHDGGRHVIGVIPKTLMPREV 89
          QAVHDGGRHVIGVIPKTLMPRE+
Sbjct: 63 QAVHDGGRHVIGVIPKTLMPREL 85

[Close]

BLAST of Cmc04g0118191.1 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-31
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 14 SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
          SKF+RICVFCGSS G K SY+D+AIELG ELVSRNIDLVYGGGSIGLMGL+SQAV +GGR
Sbjct: 5  SKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGR 64

Query: 74 HVIGVIPKTLMPREV 89
          HVIGVIPKTLMPRE+
Sbjct: 65 HVIGVIPKTLMPREI 79

[Close]

BLAST of Cmc04g0118191.1 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 131.7 bits (330), Expect = 3.0e-31
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 14 SKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 73
          S+F+RICVFCGSS GKK SYQ++AI+LG ELV R IDLVYGGGS+GLMGLVSQAVH GGR
Sbjct: 6  SRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGGR 65

Query: 74 HVIGVIPKTLMPREV 89
          HV+GVIPKTLMPRE+
Sbjct: 66 HVLGVIPKTLMPREI 80

The following BLAST results are available for this feature:

BLAST of Cmc04g0118191.1 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001292681.1	2.3e-41	98.86	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucumis sati...	[more]
KGN58962.1	2.3e-41	98.86	hypothetical protein Csa_002194 [Cucumis sativus]	[more]
XP_008442685.1	2.3e-41	98.86	PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumi...	[more]
XP_038903711.1	9.5e-40	94.32	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Benincasa hi...	[more]
XP_023528344.1	2.2e-36	92.05	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [C...	[more]

BLAST of Cmc04g0118191.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8B8	8.1e-34	90.67	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis tha...	[more]
Q9LFH3	1.8e-33	83.13	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis tha...	[more]
Q0JBP5	2.4e-33	88.00	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza...	[more]
B9F166	9.0e-33	86.67	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza...	[more]
Q5ZC82	3.8e-31	84.00	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG OS=Oryza sativa sub...	[more]

BLAST of Cmc04g0118191.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNN0	1.1e-41	98.86	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. ma...	[more]
A0A0A0LE04	1.1e-41	98.86	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3...	[more]
L7YK77	1.1e-41	98.86	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3...	[more]
A0A1S3B715	1.1e-41	98.86	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656...	[more]
A0A6J1CV24	5.3e-36	95.24	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia ...	[more]

BLAST of Cmc04g0118191.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37210.1	5.8e-35	90.67	lysine decarboxylase family protein	[more]
AT2G37210.2	5.8e-35	90.67	lysine decarboxylase family protein	[more]
AT3G53450.1	1.3e-34	83.13	Putative lysine decarboxylase family protein	[more]
AT2G28305.1	1.3e-31	85.33	Putative lysine decarboxylase family protein	[more]
AT5G06300.1	3.0e-31	81.33	Putative lysine decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.450		coord: 5..91 e-value: 6.8E-31 score: 109.3
None	No IPR available	PANTHER	PTHR31223	LOG FAMILY PROTEIN YJL055W	coord: 12..89
None	No IPR available	PANTHER	PTHR31223:SF58	CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4	coord: 12..89
None	No IPR available	SUPERFAMILY	102405	MCP/YpsA-like	coord: 14..88
IPR041164	SLOG cluster4	PFAM	PF18306	LDcluster4	coord: 24..82 e-value: 9.5E-9 score: 34.9

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0118191	Cmc04g0118191	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0118191.1-exon	Cmc04g0118191.1-exon-CMiso1.1chr04:34993068..34993459	exon
Cmc04g0118191.1-exon	Cmc04g0118191.1-exon-CMiso1.1chr04:34994009..34994106	exon
Cmc04g0118191.1-exon	Cmc04g0118191.1-exon-CMiso1.1chr04:34994240..34994374	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0118191.1-five_prime_utr	Cmc04g0118191.1-five_prime_utr-CMiso1.1chr04:34993068..34993327	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0118191.1-cds	Cmc04g0118191.1-cds-CMiso1.1chr04:34993328..34993459	CDS
Cmc04g0118191.1-cds	Cmc04g0118191.1-cds-CMiso1.1chr04:34994009..34994106	CDS
Cmc04g0118191.1-cds	Cmc04g0118191.1-cds-CMiso1.1chr04:34994240..34994288	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0118191.1-three_prime_utr	Cmc04g0118191.1-three_prime_utr-CMiso1.1chr04:34994289..34994374	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0118191.1	Cmc04g0118191.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0102682	N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity