Cmc04g0114641.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0114641.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Myb family transcription factor family protein
Location	CMiso1.1chr04: 32853688 .. 32854239 (-)
Sequence length	552
RNA-Seq Expression	Cmc04g0114641.1
Synteny	Cmc04g0114641.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCTATACTTCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTCCAAGTTTTGCCTTCACCTTCATCTTCAACCTTAAGACTAGCCATCAAATTCAAAGCCCTTTTGCAGACTCTCATTCTCTCTTTAGCTAGAGCAATCTCCCGAGCCAAAACGACGGCGTTCCAATCGGCCAATATAGCTTTGAAGAGGAACAAGAAAAAGCTTCTCTATGGCTCCTTTAGACTTCACTACAATTGGTGTTCTGTTTCTTCCAATAAATATTCTCACGTGACTCCGGCAGTTCTCACGTTCGACCACGGTATCGGCTGTGGCGCCGGAGGCGATCAACTTGGTGGGTATTTGCAATGGCTTGAGGAAAGAGATGTTAATAAAAAGAGTAATAATAATAATAATAATAATGTTGAAGATCGTGAAGAGGGTGTCAATGAGATTGATAAGTTGGCTGAGATTTTTATTGCAAGATGTCATGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA

mRNA sequence

ATGAGTTCCTATACTTCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTCCAAGTTTTGCCTTCACCTTCATCTTCAACCTTAAGACTAGCCATCAAATTCAAAGCCCTTTTGCAGACTCTCATTCTCTCTTTAGCTAGAGCAATCTCCCGAGCCAAAACGACGGCGTTCCAATCGGCCAATATAGCTTTGAAGAGGAACAAGAAAAAGCTTCTCTATGGCTCCTTTAGACTTCACTACAATTGGTGTTCTGTTTCTTCCAATAAATATTCTCACGTGACTCCGGCAGTTCTCACGTTCGACCACGGTATCGGCTGTGGCGCCGGAGGCGATCAACTTGGTGGGTATTTGCAATGGCTTGAGGAAAGAGATGTTAATAAAAAGAGTAATAATAATAATAATAATAATGTTGAAGATCGTGAAGAGGGTGTCAATGAGATTGATAAGTTGGCTGAGATTTTTATTGCAAGATGTCATGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA

Coding sequence (CDS)

ATGAGTTCCTATACTTCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTCCAAGTTTTGCCTTCACCTTCATCTTCAACCTTAAGACTAGCCATCAAATTCAAAGCCCTTTTGCAGACTCTCATTCTCTCTTTAGCTAGAGCAATCTCCCGAGCCAAAACGACGGCGTTCCAATCGGCCAATATAGCTTTGAAGAGGAACAAGAAAAAGCTTCTCTATGGCTCCTTTAGACTTCACTACAATTGGTGTTCTGTTTCTTCCAATAAATATTCTCACGTGACTCCGGCAGTTCTCACGTTCGACCACGGTATCGGCTGTGGCGCCGGAGGCGATCAACTTGGTGGGTATTTGCAATGGCTTGAGGAAAGAGATGTTAATAAAAAGAGTAATAATAATAATAATAATAATGTTGAAGATCGTGAAGAGGGTGTCAATGAGATTGATAAGTTGGCTGAGATTTTTATTGCAAGATGTCATGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA

Protein sequence

MSSYTSPSSSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLEERDVNKKSNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF

Homology

[Close]

BLAST of Cmc04g0114641.1 vs. NCBI nr
Match: XP_008443602.1 (PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo] >KAA0043723.1 uncharacterized protein E6C27_scaffold236G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 180/184 (97.83%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MSSYTSPSSSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQ 60
           MSSYTSP  SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLI SLARAISRAKTTAFQ
Sbjct: 1   MSSYTSP--SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAFQ 60

Query: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120
           SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ
Sbjct: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120

Query: 121 WLEERDVNKKS-NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM 180
           WLEERDVNKKS NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM
Sbjct: 121 WLEERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM 180

Query: 181 ARSF 184
           ARSF
Sbjct: 181 ARSF 182

[Close]

BLAST of Cmc04g0114641.1 vs. NCBI nr
Match: TYK25410.1 (uncharacterized protein E5676_scaffold352G005520 [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 4.2e-79
Identity = 169/173 (97.69%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MSSYTSPSSSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQ 60
           MSSYTSP  SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLI SLARAISRAKTTAFQ
Sbjct: 1   MSSYTSP--SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAFQ 60

Query: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120
           SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ
Sbjct: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120

Query: 121 WLEERDVNKKS-NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 173
           WLEERDVNKKS NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY
Sbjct: 121 WLEERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 171

[Close]

BLAST of Cmc04g0114641.1 vs. NCBI nr
Match: XP_031739057.1 (uncharacterized protein LOC116402823 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 5.8e-73
Identity = 158/176 (89.77%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 9   SSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSANIALKR 68
           SS +SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSAN ALKR
Sbjct: 8   SSYTSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSANTALKR 67

Query: 69  NKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLEERDV 128
           NKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT DHGI G G GGDQLGGYLQWLEERDV
Sbjct: 68  NKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLEERDV 127

Query: 129 NKKSNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 184
           NKKSN+N+N   +  ++ VNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF
Sbjct: 128 NKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 183

[Close]

BLAST of Cmc04g0114641.1 vs. NCBI nr
Match: KGN59451.2 (hypothetical protein Csa_001296 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 6.9e-58
Identity = 121/137 (88.32%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 48  ARAISRAKTTAFQSANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI- 107
           ARAISRAKTTAFQSAN ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT DHGI 
Sbjct: 12  ARAISRAKTTAFQSANTALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIG 71

Query: 108 GCGAGGDQLGGYLQWLEERDVNKKSNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKL 167
           G G GGDQLGGYLQWLEERDVNKKSN+N+N   +  ++ VNEIDKLAEIFIARCHEKFKL
Sbjct: 72  GGGGGGDQLGGYLQWLEERDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKL 131

Query: 168 EKQESYRRFQDMMARSF 184
           EKQESYRRFQDMMARSF
Sbjct: 132 EKQESYRRFQDMMARSF 148

[Close]

BLAST of Cmc04g0114641.1 vs. NCBI nr
Match: XP_038906153.1 (uncharacterized protein LOC120092033 [Benincasa hispida])

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-49
Identity = 132/183 (72.13%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 8   SSSSSSSSSSSLQVLPSPSS-STLRLAIKFKALLQTLILSLARAISRAKTTAF---QSAN 67
           S +SSSS  SSLQ+LPS SS S     +KFKA+LQTLILSLARAISRAKTTAF   + AN
Sbjct: 3   SLNSSSSPFSSLQILPSSSSPSPSSSLVKFKAVLQTLILSLARAISRAKTTAFHILKQAN 62

Query: 68  ----IALKRNKKKLLYGSFRLHYNWCSVSSNKY-SHVTPAVLTFDHGI--GCGAGGDQLG 127
               IALKRNKKKLLYGSFRLHYNWCSVSSN Y SHVTP V+T+DH    G G GGDQLG
Sbjct: 63  HQYAIALKRNKKKLLYGSFRLHYNWCSVSSNYYNSHVTPPVITWDHEYSGGGGGGGDQLG 122

Query: 128 GYLQWLEERDVNKKSNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQ 180
           GYL+WLEER+         NNN    EEGVNEIDKLAEIFIAR HEKFKLEKQESYRRFQ
Sbjct: 123 GYLEWLEERE---------NNNKIKNEEGVNEIDKLAEIFIARSHEKFKLEKQESYRRFQ 176

[Close]

BLAST of Cmc04g0114641.1 vs. ExPASy TrEMBL
Match: A0A5A7TJT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00520 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 180/184 (97.83%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MSSYTSPSSSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQ 60
           MSSYTSP  SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLI SLARAISRAKTTAFQ
Sbjct: 1   MSSYTSP--SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAFQ 60

Query: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120
           SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ
Sbjct: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120

Query: 121 WLEERDVNKKS-NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM 180
           WLEERDVNKKS NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM
Sbjct: 121 WLEERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM 180

Query: 181 ARSF 184
           ARSF
Sbjct: 181 ARSF 182

[Close]

BLAST of Cmc04g0114641.1 vs. ExPASy TrEMBL
Match: A0A1S3B8H1 (uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 180/184 (97.83%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MSSYTSPSSSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQ 60
           MSSYTSP  SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLI SLARAISRAKTTAFQ
Sbjct: 1   MSSYTSP--SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAFQ 60

Query: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120
           SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ
Sbjct: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120

Query: 121 WLEERDVNKKS-NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM 180
           WLEERDVNKKS NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM
Sbjct: 121 WLEERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM 180

Query: 181 ARSF 184
           ARSF
Sbjct: 181 ARSF 182

[Close]

BLAST of Cmc04g0114641.1 vs. ExPASy TrEMBL
Match: A0A5D3DQ67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005520 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 169/173 (97.69%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MSSYTSPSSSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQ 60
           MSSYTSP  SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLI SLARAISRAKTTAFQ
Sbjct: 1   MSSYTSP--SSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAFQ 60

Query: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120
           SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ
Sbjct: 61  SANIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQ 120

Query: 121 WLEERDVNKKS-NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 173
           WLEERDVNKKS NNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY
Sbjct: 121 WLEERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 171

[Close]

BLAST of Cmc04g0114641.1 vs. ExPASy TrEMBL
Match: A0A0A0LBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73
Identity = 158/176 (89.77%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 9   SSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSANIALKR 68
           SS +SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSAN ALKR
Sbjct: 2   SSYTSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSANTALKR 61

Query: 69  NKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLEERDV 128
           NKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT DHGI G G GGDQLGGYLQWLEERDV
Sbjct: 62  NKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLEERDV 121

Query: 129 NKKSNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 184
           NKKSN+N+N   +  ++ VNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF
Sbjct: 122 NKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 177

[Close]

BLAST of Cmc04g0114641.1 vs. ExPASy TrEMBL
Match: A0A6J1FA41 (uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC111442186 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.0e-35
Identity = 110/180 (61.11%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 11  SSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAF--------QSA 70
           S S SSSSLQ+ PS SS         KALLQTLILSLARAISRAKTTA         QSA
Sbjct: 5   SLSPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA 64

Query: 71  NIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWL 130
            IA KRNK KLL+GSFRLHYNWCS SSN   HV P  LT+    G  +  D L GYLQWL
Sbjct: 65  -IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTW----GDNSAADHLAGYLQWL 124

Query: 131 EERDVNKKSNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 183
           E+RD             E+    VNEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Sbjct: 125 EDRD-----------KEEELCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 157

[Close]

BLAST of Cmc04g0114641.1 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-17
Identity = 75/200 (37.50%), Postives = 102/200 (51.00%), Query Frame = 0


Query: 5   TSPSSSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTL----ILSLARAISRAKTTAFQ 64
           +SPSSSSSSSSSS                +K K L+Q L    +    RA+++AK+   +
Sbjct: 6   SSPSSSSSSSSSS----------------MKLKTLIQNLLTHPLYRFLRALAKAKSIFLE 65

Query: 65  SAN---------------IALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTF--- 124
            +                    +N++K+ +GSFRLHYNWCS      SHV P    F   
Sbjct: 66  ISKHNSNNKKRKLMMLFPTKASKNQRKIFFGSFRLHYNWCS------SHVVPVPQPFPFP 125

Query: 125 -DHGIGCGAGGDQLGGYLQWLEERDVNKKSNNNNNNNVEDREEGVNEIDKLAEIFIARCH 182
             +  G      QL GYL+WLE    +KK ++         + G ++ID LA++FIA CH
Sbjct: 126 SSYINGEEEDDSQLSGYLEWLE----HKKFDDVEEIGDVVADGGDDDIDHLADMFIANCH 179

[Close]

BLAST of Cmc04g0114641.1 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-16
Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 0


Query: 24  SPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAFQSANIALKRNKKKLLYGSFRLHYN 83
           S SS +  L   F  L+   +  L R++SRA++   + +    K NKK+L    F + + 
Sbjct: 7   SSSSHSTNLKTLFINLITHSLYRLLRSLSRARSVLIEIS----KHNKKRL----FMMMFY 66

Query: 84  WCSVSSNKY------SH-VTPAVLTFDHGI-GCGAGGDQL-GGYLQWLEERDVNKKSNNN 143
               S N++      SH V P    F   + G     D L   YLQWLEER V++ +N N
Sbjct: 67  TTKSSMNQHNIFFGSSHVVVPVTKPFPFSLDGHVEDEDNLESQYLQWLEER-VDENNNIN 126

Query: 144 NNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 183
           ++ +V +R+ G ++ID+LA+ FIARCHEKF LEK ESYRRFQDM+ARS
Sbjct: 127 DDQSVGERDVGDDDIDRLADKFIARCHEKFLLEKVESYRRFQDMLARS 165

[Close]

BLAST of Cmc04g0114641.1 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 79/220 (35.91%), Postives = 103/220 (46.82%), Query Frame = 0


Query: 9   SSSSSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILS----LARAISRA---------- 68
           S+SSS SSS      SP+SS+++L    K+L+QTLI+S    L R ISR           
Sbjct: 7   STSSSMSSSQCSSSSSPTSSSMKL----KSLIQTLIISQVCRLLREISRVSSILVRVLRK 66

Query: 69  KTTAFQSANIAL------KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP----------- 128
           K   F S +  L      K+ K  +L+GSFRLHYN+CS      SHV P           
Sbjct: 67  KQYNFLSVSSLLYPKRVSKKQKNNILFGSFRLHYNFCS------SHVVPVSAPVRLPEEL 126

Query: 129 ---------------AVLTFDHGIGCGAGGDQLGGYLQWLEERDVNKKSNNNNNNNVEDR 183
                          +  + D          QL  YL+ LE++          +   E+ 
Sbjct: 127 YLAHLVHESTWESMYSTESMDGRDDDDQEPSQLSSYLRQLEDK--------VKDGQEEET 186

[Close]

BLAST of Cmc04g0114641.1 vs. TAIR 10
Match: AT5G47920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 8.0e-04
Identity = 21/44 (47.73%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 143 EEGVN-----EIDKLAEIFIARCHEKFKLEKQESYRRFQDMMAR 182
           EEG N     EID +A++FI+R H++ KL+K  S++R+Q+M+AR
Sbjct: 142 EEGENFKLEDEIDHVADLFISRFHKQMKLQKLLSFKRYQEMLAR 185

The following BLAST results are available for this feature:

BLAST of Cmc04g0114641.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443602.1	3.0e-85	97.83	PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo] >KAA0043723.1 unc...	[more]
TYK25410.1	4.2e-79	97.69	uncharacterized protein E5676_scaffold352G005520 [Cucumis melo var. makuwa]	[more]
XP_031739057.1	5.8e-73	89.77	uncharacterized protein LOC116402823 [Cucumis sativus]	[more]
KGN59451.2	6.9e-58	88.32	hypothetical protein Csa_001296 [Cucumis sativus]	[more]
XP_038906153.1	1.2e-49	72.13	uncharacterized protein LOC120092033 [Benincasa hispida]	[more]

BLAST of Cmc04g0114641.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0114641.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJT8	1.4e-85	97.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8H1	1.4e-85	97.83	uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=...	[more]
A0A5D3DQ67	2.0e-79	97.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LBV5	2.8e-73	89.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1	[more]
A0A6J1FA41	4.0e-35	61.11	uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of Cmc04g0114641.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57950.1	2.8e-17	37.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G42180.1	2.4e-16	41.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06790.1	3.2e-13	35.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G47920.1	8.0e-04	47.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 147..181 e-value: 9.9E-15 score: 53.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33450:SF4	DUF761 DOMAIN PROTEIN	coord: 9..183
None	No IPR available	PANTHER	PTHR33450	EMB\|CAB67623.1-RELATED	coord: 9..183

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0114641	Cmc04g0114641	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0114641.1-exon	Cmc04g0114641.1-exon-CMiso1.1chr04:32853688..32854239	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0114641.1-cds	Cmc04g0114641.1-cds-CMiso1.1chr04:32853688..32854239	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0114641.1	Cmc04g0114641.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity