Cmc04g0096241.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0096241.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Polyubiquitin
Location	CMiso1.1chr04: 10411796 .. 10414030 (+)
Sequence length	1393
RNA-Seq Expression	Cmc04g0096241.1
Synteny	Cmc04g0096241.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTAACCACCTCTAAAATCGATAAATTTGTTTCAAATCCCTAAAACTAAAGGTGGTACTTTGGACAATTTCCCCTGATTAGGGTGCTAAAGTTAAACCCTAAATAAAGGTGTGTACGTTTCCGGAAGTTTCTAGAATCCCCAGCGAAGTTCTCCAAATCGTGGCTTGCAGACCAAGGACCCCCATTAAAATTCGTTTCTTCCTCTAAACCTCCTCCCTTAATTTTGGCATTTTGGTATTTTGGCTCCTATAAATTCACCCCCTCCTTATCCCTAATCCTTTGTCTTCCAAATTTTCCTTCAAAGCCTGCTTTTCCCATTTCGTCGTGCTTTTTCTTCATCTAAAGGTATATTTCAGTTCTAGTTTTCTTTCTCTGTTGATCTCTTGGATTTGAGGGACGTTTGAAGTTGGCTTTGTTTAATTCTTTGTTATTCAATCTCTTTTTTTGTTAGAGTTGTTGTTTAATCGTTTCCCTTGTTGTTTTTCTCCCTTCTAGTTCGATTTTAGAACGCTTTTTTGTGGGTTGATTTTAATTTCTCCGTTTTCTTACATCTTTCACAAAGAAACGATTGAAATCGTGTTTGTTTTTTTTTCCCACGGCATACGTTATTAGATCTTGTAGATAATGATCTCAATCTATTGTTTAGTTTTTGCAAATAAGAAGTTGGTTTTTTATCTCCAACTTTTTATATATTCGATTCGATGAGATGTTATACACCGTTAGGATGGAACCAAGATGTGAGGTAAGGGTGTTTGATTGAAAAATTGAACTGAGAAGTTAAAGTTCCTTCCTAACTTTTTAATGGATTGTATAATTCGTTCAATTCCTTGTCGTTCCATTTTTATTTCTGTTTCGTTTTTCGTGTTGCTGCGTATCGCTTCCCTTGTTGTTTTCCTCCCCAGATTTTGCGTTTCTTGGAGTTTCTCTGTTTTCTCTCTCCATTTTTCTACGAAAATCAATTCTATTTTTATTCGTTTTCAATTCCTGAGCTCCTTGGAATGTTATCCTTTTCTCCTGTGTAAATAAGAACCCGTATTCAATCCCAGTTCATAGTTTGGCTTTCCCAAATAAGAGCAAAAAGATTGTACATGATTTCTTCTAACTTATCAATTTGATTGGACTTTTTGTATATAGATTTGGTTCTTGAGCTATTTATGTTATGACGTTTTCATATTGAGGCCATGCGTTGAATTGGTTTCTTAACAGATGCAAATATTCGTAAAAACTCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGCTCTGATACAATTGACAATGTTAAGGCAAAGATTCAAGATAAAGAGGGCATTCCACCCGACCAACAGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGACGGCCGAACGCTTGCCGATTACAATATCCAAAAGGAATCTACACTCCATTTGGTGCTTAGACTTCGCGGTGGGATGCAAATATTTGTGAAGACCCTTACTGGCAAAACCATCACTCTTGAGGTGGAGAGTTCTGATACCATTGACAATGTCAAGGCTAAAATACAAGACAAGGAAGGTATTCCACCTGACCAACAGAGACTTATTTTTGCTGGTAAGCAGCTCGAGGACGGGCGGACTCTCGCTGACTACAATATTCAGAAGGAATCTACTCTGCATTTGGTTCTTCGTCTTCGTGGGGGTATGCAAATTTTTGTGAAAACCTTGACTGGGAAAACAATTACCTTGGAAGTGGAGAGCTCTGATACAATTGATAATGTGAAAGCTAAGATCCAAGATAAGGAGGGTATTCCACCTGACCAACAGAGGTTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTAGCAGATTATAACATTCAAAAGGAATCAACGTTGCATTTAGTGCTCCGATTGCGCGGTGGAATGCAGATTTTCGTGAAGACGTTAACAGGGAAGACAATCACATTGGAAGTCGAAAGTTCAGACACCATCGACAATGTGAAAGCGAAGATTCAAGACAAAGAGGGGATTCCTCCAGATCAACAGAGACTGATCTTTGCTGGAAAGCAATTGGAGGATGGTCGGACATTGGCTGATTACAATATCCAGAAAGAGTCCACCCTCCACCTTGTCCTCCGCCTGCGTGGTGGCTTTTAGGCGGCCCCGATGTCCTCTGTCCCTTCTGGATGGTTTAGTAGTAATAAAACTGGACTCAAAACTACTTTTATTTTAGTTTGTTATAAATGTAATATGTTGTAATGGCCTAA

mRNA sequence

TTGTAACCACCTCTAAAATCGATAAATTTGTTTCAAATCCCTAAAACTAAAGGTGGTACTTTGGACAATTTCCCCTGATTAGGGTGCTAAAGTTAAACCCTAAATAAAGGTGTGTACGTTTCCGGAAGTTTCTAGAATCCCCAGCGAAGTTCTCCAAATCGTGGCTTGCAGACCAAGGACCCCCATTAAAATTCGTTTCTTCCTCTAAACCTCCTCCCTTAATTTTGGCATTTTGGTATTTTGGCTCCTATAAATTCACCCCCTCCTTATCCCTAATCCTTTGTCTTCCAAATTTTCCTTCAAAGCCTGCTTTTCCCATTTCGTCGTGCTTTTTCTTCATCTAAAGGATGGAACCAAGATGTGAGATGCAAATATTCGTAAAAACTCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGCTCTGATACAATTGACAATGTTAAGGCAAAGATTCAAGATAAAGAGGGCATTCCACCCGACCAACAGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGACGGCCGAACGCTTGCCGATTACAATATCCAAAAGGAATCTACACTCCATTTGGTGCTTAGACTTCGCGGTGGGATGCAAATATTTGTGAAGACCCTTACTGGCAAAACCATCACTCTTGAGGTGGAGAGTTCTGATACCATTGACAATGTCAAGGCTAAAATACAAGACAAGGAAGGTATTCCACCTGACCAACAGAGACTTATTTTTGCTGGTAAGCAGCTCGAGGACGGGCGGACTCTCGCTGACTACAATATTCAGAAGGAATCTACTCTGCATTTGGTTCTTCGTCTTCGTGGGGGTATGCAAATTTTTGTGAAAACCTTGACTGGGAAAACAATTACCTTGGAAGTGGAGAGCTCTGATACAATTGATAATGTGAAAGCTAAGATCCAAGATAAGGAGGGTATTCCACCTGACCAACAGAGGTTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTAGCAGATTATAACATTCAAAAGGAATCAACGTTGCATTTAGTGCTCCGATTGCGCGGTGGAATGCAGATTTTCGTGAAGACGTTAACAGGGAAGACAATCACATTGGAAGTCGAAAGTTCAGACACCATCGACAATGTGAAAGCGAAGATTCAAGACAAAGAGGGGATTCCTCCAGATCAACAGAGACTGATCTTTGCTGGAAAGCAATTGGAGGATGGTCGGACATTGGCTGATTACAATATCCAGAAAGAGTCCACCCTCCACCTTGTCCTCCGCCTGCGTGGTGGCTTTTAGGCGGCCCCGATGTCCTCTGTCCCTTCTGGATGGTTTAGTAGTAATAAAACTGGACTCAAAACTACTTTTATTTTAGTTTGTTATAAATGTAATATGTTGTAATGGCCTAA

Coding sequence (CDS)

ATGGAACCAAGATGTGAGATGCAAATATTCGTAAAAACTCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGCTCTGATACAATTGACAATGTTAAGGCAAAGATTCAAGATAAAGAGGGCATTCCACCCGACCAACAGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGACGGCCGAACGCTTGCCGATTACAATATCCAAAAGGAATCTACACTCCATTTGGTGCTTAGACTTCGCGGTGGGATGCAAATATTTGTGAAGACCCTTACTGGCAAAACCATCACTCTTGAGGTGGAGAGTTCTGATACCATTGACAATGTCAAGGCTAAAATACAAGACAAGGAAGGTATTCCACCTGACCAACAGAGACTTATTTTTGCTGGTAAGCAGCTCGAGGACGGGCGGACTCTCGCTGACTACAATATTCAGAAGGAATCTACTCTGCATTTGGTTCTTCGTCTTCGTGGGGGTATGCAAATTTTTGTGAAAACCTTGACTGGGAAAACAATTACCTTGGAAGTGGAGAGCTCTGATACAATTGATAATGTGAAAGCTAAGATCCAAGATAAGGAGGGTATTCCACCTGACCAACAGAGGTTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTAGCAGATTATAACATTCAAAAGGAATCAACGTTGCATTTAGTGCTCCGATTGCGCGGTGGAATGCAGATTTTCGTGAAGACGTTAACAGGGAAGACAATCACATTGGAAGTCGAAAGTTCAGACACCATCGACAATGTGAAAGCGAAGATTCAAGACAAAGAGGGGATTCCTCCAGATCAACAGAGACTGATCTTTGCTGGAAAGCAATTGGAGGATGGTCGGACATTGGCTGATTACAATATCCAGAAAGAGTCCACCCTCCACCTTGTCCTCCGCCTGCGTGGTGGCTTTTAG

Protein sequence

MEPRCEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF

Homology

[Close]

BLAST of Cmc04g0096241.1 vs. NCBI nr
Match: RID45405.1 (hypothetical protein BRARA_I02135, partial [Brassica rapa])

HSP 1 Score: 591.3 bits (1523), Expect = 5.0e-165
Identity = 307/310 (99.03%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 2   EPRCEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 61
           E R +MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT
Sbjct: 53  ELRSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 112

Query: 62  LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 121
           LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
Sbjct: 113 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 172

Query: 122 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 181
           QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 173 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 232

Query: 182 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 241
           DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT
Sbjct: 233 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 292

Query: 242 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 301
           LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
Sbjct: 293 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 352

Query: 302 HLVLRLRGGF 312
           HLVLRLRGGF
Sbjct: 353 HLVLRLRGGF 362

[Close]

BLAST of Cmc04g0096241.1 vs. NCBI nr
Match: RZB43862.1 (Polyubiquitin [Glycine soja])

HSP 1 Score: 590.5 bits (1521), Expect = 8.5e-165
Identity = 306/307 (99.67%), Postives = 306/307 (99.67%), Query Frame = 0


Query: 5   CEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 64
           C MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 370 CLMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 429

Query: 65  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 124
           YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 430 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 489

Query: 125 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 184
           LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV
Sbjct: 490 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 549

Query: 185 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 244
           KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 550 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 609

Query: 245 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 304
           KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV
Sbjct: 610 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 669

Query: 305 LRLRGGF 312
           LRLRGGF
Sbjct: 670 LRLRGGF 676

[Close]

BLAST of Cmc04g0096241.1 vs. NCBI nr
Match: KAG5235663.1 (ubiquitin protein [Salix suchowensis])

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 6   EMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 65
           EMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 5   EMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 64

Query: 66  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 125
           NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL
Sbjct: 65  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 124

Query: 126 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 185
           IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
Sbjct: 125 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 184

Query: 186 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 245
           AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 185 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 244

Query: 246 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 305
           TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL
Sbjct: 245 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 304

Query: 306 RLRGGF 312
           RLRGGF
Sbjct: 305 RLRGGF 310

[Close]

BLAST of Cmc04g0096241.1 vs. NCBI nr
Match: XP_027920089.1 (LOW QUALITY PROTEIN: polyubiquitin-C [Vigna unguiculata])

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 306/307 (99.67%), Postives = 306/307 (99.67%), Query Frame = 0


Query: 5   CEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 64
           C MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 340 CCMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 399

Query: 65  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 124
           YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 400 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 459

Query: 125 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 184
           LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV
Sbjct: 460 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 519

Query: 185 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 244
           KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 520 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 579

Query: 245 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 304
           KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV
Sbjct: 580 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 639

Query: 305 LRLRGGF 312
           LRLRGGF
Sbjct: 640 LRLRGGF 646

[Close]

BLAST of Cmc04g0096241.1 vs. NCBI nr
Match: XP_038981855.1 (polyubiquitin-like [Phoenix dactylifera])

HSP 1 Score: 589.7 bits (1519), Expect = 1.4e-164
Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 5   CEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 64
           C+MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 68  CKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 127

Query: 65  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 124
           YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 128 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 187

Query: 125 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 184
           LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV
Sbjct: 188 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 247

Query: 185 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 244
           KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 248 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 307

Query: 245 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 304
           KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV
Sbjct: 308 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 367

Query: 305 LRLRGG 311
           LRLRGG
Sbjct: 368 LRLRGG 373

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy Swiss-Prot
Match: P0CG85 (Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 5.5e-167
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 393 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 307 LRGGF 312
           LRGGF
Sbjct: 453 LRGGF 457

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy Swiss-Prot
Match: P0CG84 (Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 5.5e-167
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 73  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 132

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 133 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 192

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 193 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 252

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 253 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 312

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 313 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 372

Query: 307 LRGGF 312
           LRGGF
Sbjct: 373 LRGGF 377

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy Swiss-Prot
Match: P69322 (Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2)

HSP 1 Score: 588.2 bits (1515), Expect = 5.5e-167
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 307 LRGGF 312
           LRGGF
Sbjct: 377 LRGGF 381

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy Swiss-Prot
Match: P69325 (Polyubiquitin OS=Glycine max OX=3847 GN=SUBI-1 PE=2 SV=2)

HSP 1 Score: 588.2 bits (1515), Expect = 5.5e-167
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 307 LRGGF 312
           LRGGF
Sbjct: 301 LRGGF 305

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy Swiss-Prot
Match: Q8H159 (Polyubiquitin 10 OS=Arabidopsis thaliana OX=3702 GN=UBQ10 PE=2 SV=2)

HSP 1 Score: 588.2 bits (1515), Expect = 5.5e-167
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 393 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 307 LRGGF 312
           LRGGF
Sbjct: 453 LRGGF 457

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy TrEMBL
Match: A0A397XVQ6 (Uncharacterized protein (Fragment) OS=Brassica campestris OX=3711 GN=BRARA_I02135 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.4e-165
Identity = 307/310 (99.03%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 2   EPRCEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 61
           E R +MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT
Sbjct: 53  ELRSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 112

Query: 62  LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 121
           LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
Sbjct: 113 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 172

Query: 122 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 181
           QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 173 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 232

Query: 182 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 241
           DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT
Sbjct: 233 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 292

Query: 242 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 301
           LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
Sbjct: 293 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 352

Query: 302 HLVLRLRGGF 312
           HLVLRLRGGF
Sbjct: 353 HLVLRLRGGF 362

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy TrEMBL
Match: A0A445F4X8 (Polyubiquitin OS=Glycine soja OX=3848 GN=D0Y65_054082 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.1e-165
Identity = 306/307 (99.67%), Postives = 306/307 (99.67%), Query Frame = 0


Query: 5   CEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 64
           C MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 370 CLMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 429

Query: 65  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 124
           YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 430 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 489

Query: 125 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 184
           LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV
Sbjct: 490 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 549

Query: 185 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 244
           KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 550 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 609

Query: 245 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 304
           KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV
Sbjct: 610 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 669

Query: 305 LRLRGGF 312
           LRLRGGF
Sbjct: 670 LRLRGGF 676

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy TrEMBL
Match: A0A6A4NC90 (Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus OX=3870 GN=Lalb_Chr20g0117111 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.1e-165
Identity = 305/306 (99.67%), Postives = 305/306 (99.67%), Query Frame = 0


Query: 5   CEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 64
           C MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 4   CNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 63

Query: 65  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 124
           YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 64  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 123

Query: 125 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 184
           LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV
Sbjct: 124 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 183

Query: 185 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 244
           KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 184 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 243

Query: 245 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 304
           KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV
Sbjct: 244 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 303

Query: 305 LRLRGG 311
           LRLRGG
Sbjct: 304 LRLRGG 309

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy TrEMBL
Match: A0A5D2AWF0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D10G016400v1 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 6   EMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 65
           +MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 76  DMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 135

Query: 66  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 125
           NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195

Query: 126 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 185
           IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 255

Query: 186 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 245
           AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315

Query: 246 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 305
           TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 375

Query: 306 RLRGGF 312
           RLRGGF
Sbjct: 376 RLRGGF 381

[Close]

BLAST of Cmc04g0096241.1 vs. ExPASy TrEMBL
Match: A0A6A4QFV9 (Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus OX=3870 GN=Lalb_Chr06g0173881 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.6e-164
Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 6   EMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 65
           +MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 2   KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 61

Query: 66  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 125
           NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL
Sbjct: 62  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 121

Query: 126 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 185
           IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
Sbjct: 122 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 181

Query: 186 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 245
           AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 182 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 241

Query: 246 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 305
           TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL
Sbjct: 242 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 301

Query: 306 RLRGGF 312
           RLRGGF
Sbjct: 302 RLRGGF 307

[Close]

BLAST of Cmc04g0096241.1 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-168
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 393 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 307 LRGGF 312
           LRGGF
Sbjct: 453 LRGGF 457

[Close]

BLAST of Cmc04g0096241.1 vs. TAIR 10
Match: AT4G05320.3 (polyubiquitin 10 )

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-168
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 307 LRGGF 312
           LRGGF
Sbjct: 377 LRGGF 381

[Close]

BLAST of Cmc04g0096241.1 vs. TAIR 10
Match: AT4G05320.4 (polyubiquitin 10 )

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-168
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 393 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 307 LRGGF 312
           LRGGF
Sbjct: 453 LRGGF 457

[Close]

BLAST of Cmc04g0096241.1 vs. TAIR 10
Match: AT4G05320.5 (polyubiquitin 10 )

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-168
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 307 LRGGF 312
           LRGGF
Sbjct: 301 LRGGF 305

[Close]

BLAST of Cmc04g0096241.1 vs. TAIR 10
Match: AT4G05320.1 (polyubiquitin 10 )

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-168
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 7   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 66
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 67  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 126
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 127 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 186
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256

Query: 187 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 246
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316

Query: 247 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
           ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 307 LRGGF 312
           LRGGF
Sbjct: 377 LRGGF 381

The following BLAST results are available for this feature:

BLAST of Cmc04g0096241.1 vs. NCBI nr


Match Name	E-value	Identity	Description
RID45405.1	5.0e-165	99.03	hypothetical protein BRARA_I02135, partial [Brassica rapa]	[more]
RZB43862.1	8.5e-165	99.67	Polyubiquitin [Glycine soja]	[more]
KAG5235663.1	1.1e-164	100.00	ubiquitin protein [Salix suchowensis]	[more]
XP_027920089.1	1.1e-164	99.67	LOW QUALITY PROTEIN: polyubiquitin-C [Vigna unguiculata]	[more]
XP_038981855.1	1.4e-164	99.67	polyubiquitin-like [Phoenix dactylifera]	[more]

BLAST of Cmc04g0096241.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CG85	5.5e-167	100.00	Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1	[more]
P0CG84	5.5e-167	100.00	Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1	[more]
P69322	5.5e-167	100.00	Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2	[more]
P69325	5.5e-167	100.00	Polyubiquitin OS=Glycine max OX=3847 GN=SUBI-1 PE=2 SV=2	[more]
Q8H159	5.5e-167	100.00	Polyubiquitin 10 OS=Arabidopsis thaliana OX=3702 GN=UBQ10 PE=2 SV=2	[more]

BLAST of Cmc04g0096241.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A397XVQ6	2.4e-165	99.03	Uncharacterized protein (Fragment) OS=Brassica campestris OX=3711 GN=BRARA_I0213...	[more]
A0A445F4X8	4.1e-165	99.67	Polyubiquitin OS=Glycine soja OX=3848 GN=D0Y65_054082 PE=4 SV=1	[more]
A0A6A4NC90	9.1e-165	99.67	Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus OX=3870 GN=Lalb_Chr20g0117...	[more]
A0A5D2AWF0	1.2e-164	99.67	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D10G016400v1 PE=...	[more]
A0A6A4QFV9	1.6e-164	99.67	Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus OX=3870 GN=Lalb_Chr06g0173...	[more]

BLAST of Cmc04g0096241.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05320.2	3.9e-168	100.00	polyubiquitin 10	[more]
AT4G05320.3	3.9e-168	100.00	polyubiquitin 10	[more]
AT4G05320.4	3.9e-168	100.00	polyubiquitin 10	[more]
AT4G05320.5	3.9e-168	100.00	polyubiquitin 10	[more]
AT4G05320.1	3.9e-168	100.00	polyubiquitin 10	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 38..58 score: 95.05 coord: 59..80 score: 91.18 coord: 17..37 score: 85.2
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 7..78 e-value: 3.0E-35 score: 133.1 coord: 83..154 e-value: 3.0E-35 score: 133.1 coord: 159..230 e-value: 3.0E-35 score: 133.1 coord: 235..306 e-value: 3.0E-35 score: 133.1
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 237..308 e-value: 2.5E-33 score: 113.7 coord: 9..80 e-value: 2.5E-33 score: 113.7 coord: 161..232 e-value: 2.5E-33 score: 113.7 coord: 85..156 e-value: 2.5E-33 score: 113.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 159..234 score: 30.452106
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 83..158 score: 30.452106
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 7..82 score: 30.452106
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 235..310 score: 30.452106
None	No IPR available	GENE3D	3.10.20.90		coord: 83..158 e-value: 2.6E-47 score: 161.0 coord: 235..311 e-value: 1.5E-46 score: 158.6 coord: 2..82 e-value: 2.7E-47 score: 161.0 coord: 159..234 e-value: 2.6E-47 score: 161.0
None	No IPR available	PANTHER	PTHR10666:SF350	UBIQUITIN 13	coord: 214..310 coord: 4..213
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 214..310
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 81..287 coord: 4..213
None	No IPR available	PANTHER	PTHR10666:SF350	UBIQUITIN 13	coord: 81..287
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 7..82 e-value: 5.09641E-49 score: 156.065
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 235..310 e-value: 5.09641E-49 score: 156.065
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 159..234 e-value: 5.09641E-49 score: 156.065
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 83..158 e-value: 5.09641E-49 score: 156.065
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 185..210
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 261..286
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 109..134
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 33..58
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 158..234
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 234..310
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 6..82
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 81..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0096241	Cmc04g0096241	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0096241.1-exon	Cmc04g0096241.1-exon-CMiso1.1chr04:10411796..10412141	exon
Cmc04g0096241.1-exon	Cmc04g0096241.1-exon-CMiso1.1chr04:10412520..10412538	exon
Cmc04g0096241.1-exon	Cmc04g0096241.1-exon-CMiso1.1chr04:10413003..10414030	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0096241.1-five_prime_utr	Cmc04g0096241.1-five_prime_utr-CMiso1.1chr04:10411796..10412141	five_prime_UTR
Cmc04g0096241.1-five_prime_utr	Cmc04g0096241.1-five_prime_utr-CMiso1.1chr04:10412520..10412520	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0096241.1-cds	Cmc04g0096241.1-cds-CMiso1.1chr04:10412521..10412538	CDS
Cmc04g0096241.1-cds	Cmc04g0096241.1-cds-CMiso1.1chr04:10413003..10413920	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0096241.1-three_prime_utr	Cmc04g0096241.1-three_prime_utr-CMiso1.1chr04:10413921..10414030	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0096241.1	Cmc04g0096241.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003729	mRNA binding