Cmc04g0088121.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0088121.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	proline-, glutamic acid- and leucine-rich protein 1-like isoform X1
Location	CMiso1.1chr04: 825567 .. 826790 (+)
Sequence length	1011
RNA-Seq Expression	Cmc04g0088121.1
Synteny	Cmc04g0088121.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATATATATATATAAAAGGTATAAAGATTAAAGAGTAAGTAAAAAAATTGAGTTCAAATTCTATTGGCGCCATGAGTAATCCTATTCAAGAACACCCTTACGACCCTTTCCAATCCTTCTCCACTCTCTGTCTCAACAACTCCTCCTCCTCCTCCGCTGTCGACCCTTCACTCTGTTCTTCATGCTTCCGTCCTCACTCTCGCTCCACCGCCACTCCCATGAAACGCCCCTCCCCCACGCCCCCGTCTCAACAACCCTCCACCGCCCCCACTTCCAAGAACCTCCTTCTTGATCATCAACAACCCAATTCCATCCCTTTCTCCAAGATTAATCTCCCCATTCCTTTTCCTCCCTCTGTTTCCCCTCTCCGCCGCTCTCTTTCCGACCCCACCGATGCCTGCAATTTCTCCCCTCCTCCGCCGCATACTCAATCCCCGGCAAAACGATTATGCCTAAACTCACCACTCCCTCCCCTGCCTCTCCGCCGTACTGTCTCTGACCCAAACCCAAACCCCGCCCCTGAAAAATCTTCCGATTCCCCAATTAAATTTCAGAAAGACAGCCCTGACTCGAAGGTTTGTTTGTTTGATGTATAAGATTTCCTTACCTTTGTTTCATATTTTCTTCTTCCCCCCCCCCCCCCCCCCTTTTTAAGAACAATAAACATAAATGGGTTTTCTGTTTATTTAATTTAATTCTTTCTTGGGAAAACAGAGGCTGAGAAGAATTAAGGATCGACTGAAGGAGATGAATAAGTGGTGGAACGAAGTAATGAGTGAAGAAGAAAAACACGATGATGAAATGGAGACGAAAAAGGTATGGTTTTTGTTTTAATTATTTCATTTTTTTGGTTGGTGGAATGGTTTGTAAATTGGGTATTTGAAATACAGAGAGACAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAAAAGATGATGAAGAAACAGTGGGAGTGGAAAGAGTTGGAGATTCAATGACACTAAAATTGAAGTGCTCATGTGGGAAGCGATTTGAGATTCTTCTATCTGGAAGAAACTGCTTCTACAAATTGTTGTAGTTCCAACTTTTTTTTTTTTGTACATAATTGATTTGGTTTGAAAAGCCTAATAAAATGATGGATAAGTACAATTACACATTTGTTAACAAAGTAATAATAATATGAAATATCGTATTTCAAGCAACCCTTCGTAAGATTTCATTTTTAGAATA

mRNA sequence

TGAATATATATATATAAAAGGTATAAAGATTAAAGAGTAAGTAAAAAAATTGAGTTCAAATTCTATTGGCGCCATGAGTAATCCTATTCAAGAACACCCTTACGACCCTTTCCAATCCTTCTCCACTCTCTGTCTCAACAACTCCTCCTCCTCCTCCGCTGTCGACCCTTCACTCTGTTCTTCATGCTTCCGTCCTCACTCTCGCTCCACCGCCACTCCCATGAAACGCCCCTCCCCCACGCCCCCGTCTCAACAACCCTCCACCGCCCCCACTTCCAAGAACCTCCTTCTTGATCATCAACAACCCAATTCCATCCCTTTCTCCAAGATTAATCTCCCCATTCCTTTTCCTCCCTCTGTTTCCCCTCTCCGCCGCTCTCTTTCCGACCCCACCGATGCCTGCAATTTCTCCCCTCCTCCGCCGCATACTCAATCCCCGGCAAAACGATTATGCCTAAACTCACCACTCCCTCCCCTGCCTCTCCGCCGTACTGTCTCTGACCCAAACCCAAACCCCGCCCCTGAAAAATCTTCCGATTCCCCAATTAAATTTCAGAAAGACAGCCCTGACTCGAAGAGGCTGAGAAGAATTAAGGATCGACTGAAGGAGATGAATAAGTGGTGGAACGAAGTAATGAGTGAAGAAGAAAAACACGATGATGAAATGGAGACGAAAAAGAGAGACAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAAAAGATGATGAAGAAACAGTGGGAGTGGAAAGAGTTGGAGATTCAATGACACTAAAATTGAAGTGCTCATGTGGGAAGCGATTTGAGATTCTTCTATCTGGAAGAAACTGCTTCTACAAATTGTTGTAGTTCCAACTTTTTTTTTTTTGTACATAATTGATTTGGTTTGAAAAGCCTAATAAAATGATGGATAAGTACAATTACACATTTGTTAACAAAGTAATAATAATATGAAATATCGTATTTCAAGCAACCCTTCGTAAGATTTCATTTTTAGAATA

Coding sequence (CDS)

ATGAGTAATCCTATTCAAGAACACCCTTACGACCCTTTCCAATCCTTCTCCACTCTCTGTCTCAACAACTCCTCCTCCTCCTCCGCTGTCGACCCTTCACTCTGTTCTTCATGCTTCCGTCCTCACTCTCGCTCCACCGCCACTCCCATGAAACGCCCCTCCCCCACGCCCCCGTCTCAACAACCCTCCACCGCCCCCACTTCCAAGAACCTCCTTCTTGATCATCAACAACCCAATTCCATCCCTTTCTCCAAGATTAATCTCCCCATTCCTTTTCCTCCCTCTGTTTCCCCTCTCCGCCGCTCTCTTTCCGACCCCACCGATGCCTGCAATTTCTCCCCTCCTCCGCCGCATACTCAATCCCCGGCAAAACGATTATGCCTAAACTCACCACTCCCTCCCCTGCCTCTCCGCCGTACTGTCTCTGACCCAAACCCAAACCCCGCCCCTGAAAAATCTTCCGATTCCCCAATTAAATTTCAGAAAGACAGCCCTGACTCGAAGAGGCTGAGAAGAATTAAGGATCGACTGAAGGAGATGAATAAGTGGTGGAACGAAGTAATGAGTGAAGAAGAAAAACACGATGATGAAATGGAGACGAAAAAGAGAGACAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAAAAGATGATGAAGAAACAGTGGGAGTGGAAAGAGTTGGAGATTCAATGACACTAAAATTGAAGTGCTCATGTGGGAAGCGATTTGAGATTCTTCTATCTGGAAGAAACTGCTTCTACAAATTGTTGTAG

Protein sequence

MSNPIQEHPYDPFQSFSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPIKFQKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEKDDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL

Homology

[Close]

BLAST of Cmc04g0088121.1 vs. NCBI nr
Match: XP_011652649.2 (histone H3.v1 [Cucumis sativus] >KAE8651441.1 hypothetical protein Csa_001330 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 2.9e-110
Identity = 234/262 (89.31%), Postives = 242/262 (92.37%), Query Frame = 0


Query: 1   MSNPIQEHPYDPFQSFSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRPSPTPP-S 60
           MSNPIQE PYDPFQSFSTLCL NSSSSSAVDPSLCSSCFRPHSRS+ATPMKRPSPTPP S
Sbjct: 1   MSNPIQEQPYDPFQSFSTLCL-NSSSSSAVDPSLCSSCFRPHSRSSATPMKRPSPTPPSS 60

Query: 61  QQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDACNFSPPPPHT 120
           QQ ST  TSKNLLLD QQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDA NFS PP  T
Sbjct: 61  QQLSTVTTSKNLLLDPQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDARNFS-PPLQT 120

Query: 121 QSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPIKFQKDSPDSKRLRRIKDRLKE 180
           QSPAKRLCLNSPLPPLPLRRTVSD  PNPAPEK+SDSPIK QKDSP+SKRL+RIKDRLKE
Sbjct: 121 QSPAKRLCLNSPLPPLPLRRTVSD--PNPAPEKTSDSPIKIQKDSPESKRLKRIKDRLKE 180

Query: 181 MNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEKDDEETVGVERVGDSMTLKL 240
           MN WWNEVMSEEE+H+DE E KKRD+EEEEEEEEEE   EKDDEETVGVERVGDSMTLKL
Sbjct: 181 MNHWWNEVMSEEEEHNDEKEIKKRDDEEEEEEEEEE---EKDDEETVGVERVGDSMTLKL 240

Query: 241 KCSCGKRFEILLSGRNCFYKLL 262
           KCSCGKRF+ILLSGRNCFYKLL
Sbjct: 241 KCSCGKRFDILLSGRNCFYKLL 255

[Close]

BLAST of Cmc04g0088121.1 vs. NCBI nr
Match: XP_038888901.1 (uncharacterized protein LOC120078676 [Benincasa hispida])

HSP 1 Score: 308.1 bits (788), Expect = 7.0e-80
Identity = 193/270 (71.48%), Postives = 208/270 (77.04%), Query Frame = 0


Query: 1   MSNPIQ--------EHPYDPFQS-FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
           MSN IQ        E P+DPF S FSTLCLN     SAVDPSLCSSC R H RS ATPMK
Sbjct: 1   MSNLIQESSEPQNPEEPFDPFHSRFSTLCLN----PSAVDPSLCSSCARRHPRSAATPMK 60

Query: 61  RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDACN 120
           RP+PTPP Q P     SKNL LDHQQP+S  FSKI+LPIPF PSV PLRRS+SDPT+A N
Sbjct: 61  RPTPTPPQQHP-----SKNLFLDHQQPDS-TFSKIDLPIPFDPSVFPLRRSVSDPTEARN 120

Query: 121 FSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPIKFQKDSPDSKRLR 180
           FSP P   QSPAKRLCLNSPLPPLPLRRTVSD  PNP+PEK+SDSPIK  KD+P+SKRLR
Sbjct: 121 FSPTPV-IQSPAKRLCLNSPLPPLPLRRTVSD--PNPSPEKTSDSPIKIGKDNPESKRLR 180

Query: 181 RIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEKDDEETVGVERV 240
           RIKDRLKEMN+WWNEVMSEE+   DE ETKK D  +EEEE          DEETVGVERV
Sbjct: 181 RIKDRLKEMNQWWNEVMSEEQ---DENETKKSDCLKEEEE----------DEETVGVERV 240

Query: 241 GDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           GDS+ L LKCSCGK FEILLSGR+CFYKLL
Sbjct: 241 GDSLALHLKCSCGKGFEILLSGRSCFYKLL 244

[Close]

BLAST of Cmc04g0088121.1 vs. NCBI nr
Match: KAG6606253.1 (hypothetical protein SDJN03_03570, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036195.1 hypothetical protein SDJN02_02996, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-52
Identity = 162/281 (57.65%), Postives = 191/281 (67.97%), Query Frame = 0


Query: 1   MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRP 60
           MSN IQE   P +P Q      FSTLCLN   +     P LCSSC R   R  AT  KR 
Sbjct: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHR-RPPLCSSCGRRPPRCAATHKKRR 60

Query: 61  SPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120
           SPT    Q  TA T K+ LLD +Q N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  SPT--QIQDPTATTKKH-LLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120

Query: 121 DACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPI-------KF 180
           +A NFSPP     SPAKRLC NS LPPLPLRRTVSD  P P+ +K+S SP+         
Sbjct: 121 EARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSTDKTSVSPLTIGRVNDSI 180

Query: 181 QKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEK 240
           ++DSPDSKRLR+IKDRLKEMN+WWNEVMSE+E H++E    KRD + E +++ E  ++E+
Sbjct: 181 KEDSPDSKRLRKIKDRLKEMNEWWNEVMSEQE-HEEE----KRDEKNETKKKVECCKEEE 240

Query: 241 DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           D+EETVGVERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 241 DEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 265

[Close]

BLAST of Cmc04g0088121.1 vs. NCBI nr
Match: XP_022995233.1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 8.1e-52
Identity = 160/281 (56.94%), Postives = 188/281 (66.90%), Query Frame = 0


Query: 1   MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRP 60
           MSN IQE   P +P Q      FSTLCLN   +     P LCSSC R   R  AT  KR 
Sbjct: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHR-RPPLCSSCGRRPPRCAATHKKRR 60

Query: 61  SPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120
           SPT   Q    A T+K  LLD +Q N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  SPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120

Query: 121 DACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPI-------KF 180
           +A NFSPP     SPAKRLC NS LPPLPLRRTVSD  P P+ E++S+SP+         
Sbjct: 121 EARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVNDSI 180

Query: 181 QKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEK 240
           ++DSPDSKRLR+IK+RLKEMN+WWNEVMSE+E H++E    KRD  E ++  ++EE    
Sbjct: 181 KEDSPDSKRLRKIKNRLKEMNEWWNEVMSEQE-HEEE----KRDENETKKCCKDEE---- 240

Query: 241 DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           D+EETVGVERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 241 DEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 261

[Close]

BLAST of Cmc04g0088121.1 vs. NCBI nr
Match: XP_022995232.1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-51
Identity = 161/281 (57.30%), Postives = 190/281 (67.62%), Query Frame = 0


Query: 1   MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRP 60
           MSN IQE   P +P Q      FSTLCLN   +     P LCSSC R   R  AT  KR 
Sbjct: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHR-RPPLCSSCGRRPPRCAATHKKRR 60

Query: 61  SPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120
           SPT   Q    A T+K  LLD +Q N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  SPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120

Query: 121 DACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPI-------KF 180
           +A NFSPP     SPAKRLC NS LPPLPLRRTVSD  P P+ E++S+SP+         
Sbjct: 121 EARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVNDSI 180

Query: 181 QKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEK 240
           ++DSPDSKRLR+IK+RLKEMN+WWNEVMSE+E H++E    KRD E E +++ E  + E+
Sbjct: 181 KEDSPDSKRLRKIKNRLKEMNEWWNEVMSEQE-HEEE----KRD-ENETKKKVECCKDEE 240

Query: 241 DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           D+EETVGVERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 241 DEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 264

[Close]

BLAST of Cmc04g0088121.1 vs. ExPASy TrEMBL
Match: A0A0A0LI25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902250 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.5e-107
Identity = 230/269 (85.50%), Postives = 242/269 (89.96%), Query Frame = 0


Query: 1   MSNPIQEHPYDPFQSFSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRPSPTPP-S 60
           MSNPIQE PYDPFQSFSTLCL NSSSSSAVDPSLCSSCFRPHSRS+ATPMKRPSPTPP S
Sbjct: 1   MSNPIQEQPYDPFQSFSTLCL-NSSSSSAVDPSLCSSCFRPHSRSSATPMKRPSPTPPSS 60

Query: 61  QQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDACNFSPPPPHT 120
           QQ ST  TSKNLLLD QQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDA NFS PP  T
Sbjct: 61  QQLSTVTTSKNLLLDPQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDARNFS-PPLQT 120

Query: 121 QSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPIKFQKDSPDSKRLRRIKDRLKE 180
           QSPAKRLCLNSPLPPLPLRRTVSD  PNPAPEK+SDSPIK QKDSP+SKRL+RIKDRLKE
Sbjct: 121 QSPAKRLCLNSPLPPLPLRRTVSD--PNPAPEKTSDSPIKIQKDSPESKRLKRIKDRLKE 180

Query: 181 MNKWWNEVMSEEEKHDDEMETKKR-------DNEEEEEEEEEEEEKEKDDEETVGVERVG 240
           MN WWNEVMSEEE+H+DE E KK        + + ++EEEEEEEE+EKDDEETVGVERVG
Sbjct: 181 MNHWWNEVMSEEEEHNDEKEIKKEWFVNGVFEIQRDDEEEEEEEEEEKDDEETVGVERVG 240

Query: 241 DSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           DSMTLKLKCSCGKRF+ILLSGRNCFYKLL
Sbjct: 241 DSMTLKLKCSCGKRFDILLSGRNCFYKLL 265

[Close]

BLAST of Cmc04g0088121.1 vs. ExPASy TrEMBL
Match: A0A6J1K7B1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490841 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 3.9e-52
Identity = 160/281 (56.94%), Postives = 188/281 (66.90%), Query Frame = 0


Query: 1   MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRP 60
           MSN IQE   P +P Q      FSTLCLN   +     P LCSSC R   R  AT  KR 
Sbjct: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHR-RPPLCSSCGRRPPRCAATHKKRR 60

Query: 61  SPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120
           SPT   Q    A T+K  LLD +Q N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  SPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120

Query: 121 DACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPI-------KF 180
           +A NFSPP     SPAKRLC NS LPPLPLRRTVSD  P P+ E++S+SP+         
Sbjct: 121 EARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVNDSI 180

Query: 181 QKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEK 240
           ++DSPDSKRLR+IK+RLKEMN+WWNEVMSE+E H++E    KRD  E ++  ++EE    
Sbjct: 181 KEDSPDSKRLRKIKNRLKEMNEWWNEVMSEQE-HEEE----KRDENETKKCCKDEE---- 240

Query: 241 DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           D+EETVGVERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 241 DEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 261

[Close]

BLAST of Cmc04g0088121.1 vs. ExPASy TrEMBL
Match: A0A6J1JY87 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490841 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 5.1e-52
Identity = 161/281 (57.30%), Postives = 190/281 (67.62%), Query Frame = 0


Query: 1   MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRP 60
           MSN IQE   P +P Q      FSTLCLN   +     P LCSSC R   R  AT  KR 
Sbjct: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHR-RPPLCSSCGRRPPRCAATHKKRR 60

Query: 61  SPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120
           SPT   Q    A T+K  LLD +Q N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  SPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120

Query: 121 DACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPI-------KF 180
           +A NFSPP     SPAKRLC NS LPPLPLRRTVSD  P P+ E++S+SP+         
Sbjct: 121 EARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVNDSI 180

Query: 181 QKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEK 240
           ++DSPDSKRLR+IK+RLKEMN+WWNEVMSE+E H++E    KRD E E +++ E  + E+
Sbjct: 181 KEDSPDSKRLRKIKNRLKEMNEWWNEVMSEQE-HEEE----KRD-ENETKKKVECCKDEE 240

Query: 241 DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           D+EETVGVERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 241 DEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 264

[Close]

BLAST of Cmc04g0088121.1 vs. ExPASy TrEMBL
Match: A0A6J1EYB4 (uncharacterized protein LOC111437321 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437321 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 162/281 (57.65%), Postives = 188/281 (66.90%), Query Frame = 0


Query: 1   MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRP 60
           MSN IQE   P +P Q      FSTLCLN   +     P LCSSC R   R  AT  KR 
Sbjct: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHR-RPPLCSSCGRRPPRCAATHKKRR 60

Query: 61  SPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120
           SPT    Q  TA T K+ LLD +Q N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  SPT--QIQDPTATTKKH-LLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120

Query: 121 DACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPI-------KF 180
           +A NFSPP     SPAKRLC NS LPPLPLRRTVSD  P P+ +K+S SP+         
Sbjct: 121 EARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSTDKTSVSPLTIGRVNDSI 180

Query: 181 QKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEK 240
           ++DSPDSKRLR+IKDRLKEMN+WWNEVMSE+E H++E    KRD  E ++  +E+E    
Sbjct: 181 KEDSPDSKRLRKIKDRLKEMNEWWNEVMSEQE-HEEE----KRDENETKKCCKEDE---- 240

Query: 241 DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           D+EETVGVERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 241 DEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 261

[Close]

BLAST of Cmc04g0088121.1 vs. ExPASy TrEMBL
Match: A0A6J1ET23 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437321 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 4.3e-51
Identity = 162/281 (57.65%), Postives = 190/281 (67.62%), Query Frame = 0


Query: 1   MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSAVDPSLCSSCFRPHSRSTATPMKRP 60
           MSN IQE   P +P Q      FSTLCLN   +     P LCSSC R   R  AT  KR 
Sbjct: 1   MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHR-RPPLCSSCGRRPPRCAATHKKRR 60

Query: 61  SPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSDPT 120
           SPT    Q  TA T K+ LLD +Q N   FSKI+LPIPF PS       SPL RS+SDPT
Sbjct: 61  SPT--QIQDPTATTKKH-LLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSDPT 120

Query: 121 DACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKSSDSPI-------KF 180
           +A NFSPP     SPAKRLC NS LPPLPLRRTVSD  P P+ +K+S SP+         
Sbjct: 121 EARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSTDKTSVSPLTIGRVNDSI 180

Query: 181 QKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEEEEEEEEEEEEKEK 240
           ++DSPDSKRLR+IKDRLKEMN+WWNEVMSE+E H++E    KRD E E ++  E  ++++
Sbjct: 181 KEDSPDSKRLRKIKDRLKEMNEWWNEVMSEQE-HEEE----KRD-ENETKKVVECCKEDE 240

Query: 241 DDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
           D+EETVGVERVGDS+ L+LKC CGK FEILLSG +CFYKLL
Sbjct: 241 DEEETVGVERVGDSLELRLKCPCGKGFEILLSGTSCFYKLL 264

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BLAST of Cmc04g0088121.1 vs. TAIR 10
Match: AT2G32235.1 (unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 11; Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 5.5e-06
Identity = 92/294 (31.29%), Postives = 151/294 (51.36%), Query Frame = 0


Query: 7   EHPYDPFQ---SFSTLCLNNSSSSS------AVDPSLCSSCFRPHSRSTAT--PMKRPSP 66
           ++ YDP +     S L LN+  +SS      +  P   S      S +TAT  P+KRPS 
Sbjct: 21  DYSYDPEEDDIDLSLLRLNSFGNSSDRRRANSSPPQFKSYGSFGSSSTTATTSPVKRPS- 80

Query: 67  TPPSQQPSTAPTSKNLLL----DHQQPNSIPFSKINLP-IPFPPSV--SPL-RRSLSD-- 126
             P  +    P  K L +    + + PN + +SKI LP + F P+   SPL +RSLSD  
Sbjct: 81  --PESKQGDEPRRKKLFIPRPEEEEDPNLMGYSKIPLPVVEFNPTQIRSPLYKRSLSDTF 140

Query: 127 --PTDACNFSPPPPHTQSPAKRLCL----NSP-LPPLP--LRRTVSDPNPNPAPE----- 186
             P  +   S    +T++   +       N P LPP P   RR+VSD +P P+ +     
Sbjct: 141 ASPVGSTFGSGGSGYTRNSVAQETSPPSGNVPSLPPRPRMFRRSVSDLSPAPSSKSLLGS 200

Query: 187 -KSSDSP---IKFQKDSPDSKRLRRIKDRLKEMNKWWNEVMSEEEKHDDEMETKKRDNEE 246
            +S+  P   +   + S  +K L  IKD ++E+++W N+++   E        K+ D+ +
Sbjct: 201 SRSNAIPEGDLANPESSDANKMLYIIKDGVRELDQWCNKLLKYGEAVSSG-SVKQDDSPK 260

Query: 247 EEEEEEEEEEKEKDDEETVGVERVGDSMTLKLKCSCGKRFEILLSGRNCFYKLL 262
             +E  ++EE+ K+ +E V V R+G++  +++ C CG+ ++ L SGR+C+YKLL
Sbjct: 261 AVDEVVQQEEQPKECKEGVKVNRLGEAFVVEINCPCGRNYQTLFSGRDCYYKLL 310

The following BLAST results are available for this feature:

BLAST of Cmc04g0088121.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652649.2	2.9e-110	89.31	histone H3.v1 [Cucumis sativus] >KAE8651441.1 hypothetical protein Csa_001330 [C...	[more]
XP_038888901.1	7.0e-80	71.48	uncharacterized protein LOC120078676 [Benincasa hispida]	[more]
KAG6606253.1	2.8e-52	57.65	hypothetical protein SDJN03_03570, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022995233.1	8.1e-52	56.94	proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 [Cucurbita m...	[more]
XP_022995232.1	1.1e-51	57.30	proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 [Cucurbita m...	[more]

BLAST of Cmc04g0088121.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0088121.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI25	1.5e-107	85.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902250 PE=4 SV=1	[more]
A0A6J1K7B1	3.9e-52	56.94	proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 OS=Cucurbita...	[more]
A0A6J1JY87	5.1e-52	57.30	proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita...	[more]
A0A6J1EYB4	1.1e-51	57.65	uncharacterized protein LOC111437321 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ET23	4.3e-51	57.65	proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita...	[more]

BLAST of Cmc04g0088121.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32235.1	5.5e-06	31.29	unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..229

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0088121	Cmc04g0088121	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088121.1-exon	Cmc04g0088121.1-exon-CMiso1.1chr04:825567..826143	exon
Cmc04g0088121.1-exon	Cmc04g0088121.1-exon-CMiso1.1chr04:826283..826384	exon
Cmc04g0088121.1-exon	Cmc04g0088121.1-exon-CMiso1.1chr04:826459..826790	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088121.1-five_prime_utr	Cmc04g0088121.1-five_prime_utr-CMiso1.1chr04:825567..825639	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088121.1-cds	Cmc04g0088121.1-cds-CMiso1.1chr04:825640..826143	CDS
Cmc04g0088121.1-cds	Cmc04g0088121.1-cds-CMiso1.1chr04:826283..826384	CDS
Cmc04g0088121.1-cds	Cmc04g0088121.1-cds-CMiso1.1chr04:826459..826638	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088121.1-three_prime_utr	Cmc04g0088121.1-three_prime_utr-CMiso1.1chr04:826639..826790	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088121.1	Cmc04g0088121.1-protein	polypeptide