Cmc03g0063681.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc03g0063681.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr03: 4227924 .. 4229050 (-)
Sequence length758
RNA-Seq ExpressionCmc03g0063681.1
SyntenyCmc03g0063681.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATATGTTTTTTTATTAAATATTATTTTGGGAAAAGGATAAAGTAAAAAGTGAACAGGGTTTGGAGTATCTACTCTACGAGGAATCTGTGCATTTACTAAAAGAAATGGAAAAGAATTTTTTTTTTTTTGGAGCTTTCGTCTTCTTCCTCAAGAGGACCGCCACCCGTCCTTCGAATTTCTTTCCGGCTGCTTGTCCACCTCCACATGTTTCCGCCGCCCACCACCGCTATCCGATTGTTTTTAGGTGAGTTTTTGGTAGTTTTGGTGTTTGACTCTAAGTTTTGATAAAGATTGGTTTTAAGAAATTTATTATGGAGTTCATGTAGTTTTTCCAACAAGATCGGAATTTGAAGTTTCAATGTCAATTGGTTAAGTTAAAATCAGAGAATTAAAATTAGTTTGTGGATAAAACTATTAATTTAAATTGTTACATTTAGCTTCCACACAGACGAGTTGGATTAAATTCAATTGATAAGGATATATATCAAGTTGAATTAAATTGGGTTAAATTGCATTGACACCGATTTAATTTGGTAAAATCATACTAAAATCATGTGTATGATGGTTATGTAAATTGAATAATCTTGAATAAATGTTTTATGATTTATGACAGATTGAGTTTGATTGAATTAGAAAGTTTTTAGATCGACGGTAACCGTAGGCCAGTATACCCCATATGTACGGGACGCTATGGGATCACTGCTGTTAAGTGTACCCTCAAATTCATGTGCTCCCATGAGATCGCTAAACTAACCAAAAAGTGTACCCCATGAGATCATGTGTGCTCCTACCGGATATTTCCTTTATAGGAGTTAAGGGTTAGCAATGGGTCTCTCCTACGGAACCTTTCCTTAATAGAAAGTTAAGGATTAGTAGTGGATCCCTCCCTTACTAAGTATTTCATATACCCACCCTTGTATATTTAATTTTTCATACCTTCGCTATTTATTTTTATTTATATGATTTTTGAATGCTATGAACTTTTGGGTAGATGGTCATTGAATTTATTCAAACGTTTTTGTTTTTTTTAATGACTTAATTGGGACCCCAACTAAGTTTTTTATTATTTTAACGAGGTTGTCTTCATTTTTATTTTTTTATAAAGTGACCTCAACTTTGCATGGTT

mRNA sequence

TATATGTTTTTTTATTAAATATTATTTTGGGAAAAGGATAAAGTAAAAAGTGAACAGGGTTTGGAGTATCTACTCTACGAGGAATCTGTGCATTTACTAAAAGAAATGGAAAAGAATTTTTTTTTTTTTGGAGCTTTCGTCTTCTTCCTCAAGAGGACCGCCACCCGTCCTTCGAATTTCTTTCCGGCTGCTTGTCCACCTCCACATGTTTCCGCCGCCCACCACCGCTATCCGATTGTTTTTAGATTGAGTTTGATTGAATTAGAAAGTTTTTAGATCGACGGTAACCGTAGGCCAGTATACCCCATATGTACGGGACGCTATGGGATCACTGCTGTTAAGTGTACCCTCAAATTCATGTGCTCCCATGAGATCGCTAAACTAACCAAAAAGTGTACCCCATGAGATCATGTGTGCTCCTACCGGATATTTCCTTTATAGGAGTTAAGGGTTAGCAATGGGTCTCTCCTACGGAACCTTTCCTTAATAGAAAGTTAAGGATTAGTAGTGGATCCCTCCCTTACTAAGTATTTCATATACCCACCCTTGTATATTTAATTTTTCATACCTTCGCTATTTATTTTTATTTATATGATTTTTGAATGCTATGAACTTTTGGGTAGATGGTCATTGAATTTATTCAAACGTTTTTGTTTTTTTTAATGACTTAATTGGGACCCCAACTAAGTTTTTTATTATTTTAACGAGGTTGTCTTCATTTTTATTTTTTTATAAAGTGACCTCAACTTTGCATGGTT

Coding sequence (CDS)

ATGGAAAAGAATTTTTTTTTTTTTGGAGCTTTCGTCTTCTTCCTCAAGAGGACCGCCACCCGTCCTTCGAATTTCTTTCCGGCTGCTTGTCCACCTCCACATGTTTCCGCCGCCCACCACCGCTATCCGATTGTTTTTAGATTGAGTTTGATTGAATTAGAAAGTTTTTAG

Protein sequence

MEKNFFFFGAFVFFLKRTATRPSNFFPAACPPPHVSAAHHRYPIVFRLSLIELESF
Homology
The following BLAST results are available for this feature:
BLAST of Cmc03g0063681.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0063681.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0063681.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0063681.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc03g0063681Cmc03g0063681gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0063681.1-exonCmc03g0063681.1-exon-CMiso1.1chr03:4227924..4228436exon
Cmc03g0063681.1-exonCmc03g0063681.1-exon-CMiso1.1chr03:4228806..4229050exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0063681.1-three_prime_utrCmc03g0063681.1-three_prime_utr-CMiso1.1chr03:4227924..4228405three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0063681.1-cdsCmc03g0063681.1-cds-CMiso1.1chr03:4228406..4228436CDS
Cmc03g0063681.1-cdsCmc03g0063681.1-cds-CMiso1.1chr03:4228806..4228945CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0063681.1-five_prime_utrCmc03g0063681.1-five_prime_utr-CMiso1.1chr03:4228946..4229050five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc03g0063681.1Cmc03g0063681.1-proteinpolypeptide