Cmc03g0060701.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc03g0060701.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr03: 926889 .. 929375 (+)
Sequence length	2487
RNA-Seq Expression	Cmc03g0060701.1
Synteny	Cmc03g0060701.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTACCAATTTTGCCCCCAGCCCCAACGAGGAAGTCCAACCGACCAACGGCTCTGCTTCAAATTATCCGGTGAAATTAAGACATACTAATTTTCAACCCGAATTTGTGGCCGTGGCGGGAACTTCAAACCACTTTCCGGCTATGTTCTCGCCGGCGTTCATCTCAACGGCTATCACTTCTCAATCACCGCCTTGTTTAACTTTTCAACGAACGTCAACGTCACAATCGGCCCGGCGGACCTGTTCCAAACGGAACCTCACTACTTTCAACCGTTATAAAAGCTCCACAAATTTCCCGTTCAAATTTGTCGAAGACCAATCCAAGGCTTTTTCGATCGCATGCACAACGGCAAAGTGTACTACTACTGAAGAATACGCCGATGTCGAATCTTGCAGCAATCAGTCGGTGAGTGGATGTCTGAGTCACTATTTGATTGGGGTTTGGCTTCGCTCTAGTCGTAGCGTCAAGAAATTAAGGGCGGTACATGCTTTCATTTTGCGGCATTTTACAAGTTTTTCGATCTATGTTGGAAACAATTTGCTTAGTTCTTACTTAAGAGTCGGAATGTTGGTTGATGCTAGAAAGGTGTTCGATGAAATGCCAATGAGGAGTGTTGTAACATGGACGGCTATTATTAATGGGTATATTGATTTAGATTTGACTGAAGAAGCTTTAGCGTTGTTCAGTGATTCGGTTAAGAGCGGGGTGCTGGCGAATGGGCAGATGTTTGTTTGTATCTTGAACTTGTGTGCGAAGAGGTTGGATTTTGAGCTTGGGAGGCAAATTCATGGCGTTATTGTGAAAGGTAATCGCGGGAATTTGATTGTTGACAGTGCCATTATTTACTTTTATGCACAATGTAAAGATATTTCCAGTGCTTTTGTTGCATTTGAACGTATGCGGAGGCGTGACGTTGTTTGTTGGACTTCTATGATTACTTCTTGTTCCCAACAAGGGCTTGGACAAGAAGCGATTTCGATGTTCTCTAATATGCTAAGCGATGGATTTCTACCAAATGAGTTTTCCGTATGCAGTGTTCTCAAGGCTTGTGGAGAAGAGAGGGAATTGAAGATTGGGAGACAGTTACATGGTTTGGTAATTAAGAAAATAATCAAGAATGACGTTTTTGTTGGGACTTCATTGGTTGATATGTATGCCAAGTGCGGGAACTTGGTGGATTCTAGAGAAGTATTCGATGGGATGAGGAATAGGAACACGGTTACGTGGACGTCAATCATAGCTGGTTATGCACGGGAGGGGCTCGGTGAGGAGGCTCTGAACCTCTTTAGGTTGATGAAGAGGCAAAGGATTCCTGCCAATAACTTAACCATTGTAAGTATTCTCCGCGCTTGTGGCTCGATTGAGGCATCATTGACTGGGAGGGAAGTTCATGCCCAGATTGTAAAAAATTCATTTCAAACTAATATACACATAGGAAGCACTCTAGTTTGGTTCTACTGTAAGTGTAGGAATCAACTTAAGGCCTCGATGGTTCTTCAGCTGATGCCGCTTAGAGATGTGGTTTCTTGGACAGCCATCATTTCTGGATGTGCTCATCTTGGGCACGAGTCCGAGGCACTTGAGTTTCTAAAAAACATGATAGAGGAAGGTGTTGAACCAAATTCCTTTACTTATTCGTCAACTTTAAAAGCGTGTGCCAAGATGGAAGCTATCCTCCAAGGGAAAATGATCCACTCTTCCGCAAATAAAACATCTGCGTTGTCCAATGTTTTTGTGGGAAGTGCACTGATTTACATGTATGCAAAATGTGGATATGTAACCGAAGCTTCTCAAGTTTTCGACAGTATGCCGGTGAGGAATTTGGTTTCTTGGAAGGCCATGATTTTGTGTTATGCTAGGAATGGTCTGTGCCGAGAGGCATTAAAGCTCATGTATCGGATGCAAGCTGAAGGTTTCGAAGTGGACGATTACATTCTTGGAACAGTTTATGGAGCTTGTGGAGATGTGAAATGTGATGTGGATTCATCATTTGAACATAGTTTGCAAACTCATTGATCTCCCAGTTTGAATGGTTATCTAGATTCGACATTTGACGACGGAAATCTTGCCATCTCAAGGAGGTTTGCACTGGTTCATCCTGTTTTATTTGGAATGCCAATGATCTGAAGAACTTTCTTGTGCTCTTTATCACTCCATAAATCAAAATTTTTGAAGAGGGGAGAAACAAATCATTGAACTCTACCCCACCTGGCTGAGATGATTTATCTGCTCTATGCAACATAACATGTATTTTACAACCCACGCCTACTTAATTGTAAAAAAATCCAATGTAATCTTTGTAAATCCATACCTATCTAGCTGCAGTTCTATGAATAGGCCCTACTTAAATTTGCTTTTCATATGATAGAACACTATAAATTCTTAGGAATGTAAAACCAAATGATTCAAACTTTCGATCATGAATATATGTTTTAACCATCTTTAAGATTGCTTAGATTATATATCTCCCACTATTTTTTG

mRNA sequence

ATGGGAATTACCAATTTTGCCCCCAGCCCCAACGAGGAAGTCCAACCGACCAACGGCTCTGCTTCAAATTATCCGGTGAAATTAAGACATACTAATTTTCAACCCGAATTTGTGGCCGTGGCGGGAACTTCAAACCACTTTCCGGCTATGTTCTCGCCGGCGTTCATCTCAACGGCTATCACTTCTCAATCACCGCCTTGTTTAACTTTTCAACGAACGTCAACGTCACAATCGGCCCGGCGGACCTGTTCCAAACGGAACCTCACTACTTTCAACCGTTATAAAAGCTCCACAAATTTCCCGTTCAAATTTGTCGAAGACCAATCCAAGGCTTTTTCGATCGCATGCACAACGGCAAAGTGTACTACTACTGAAGAATACGCCGATGTCGAATCTTGCAGCAATCAGTCGGTGAGTGGATGTCTGAGTCACTATTTGATTGGGGTTTGGCTTCGCTCTAGTCGTAGCGTCAAGAAATTAAGGGCGGTACATGCTTTCATTTTGCGGCATTTTACAAGTTTTTCGATCTATGTTGGAAACAATTTGCTTAGTTCTTACTTAAGAGTCGGAATGTTGGTTGATGCTAGAAAGGTGTTCGATGAAATGCCAATGAGGAGTGTTGTAACATGGACGGCTATTATTAATGGGTATATTGATTTAGATTTGACTGAAGAAGCTTTAGCGTTGTTCAGTGATTCGGTTAAGAGCGGGGTGCTGGCGAATGGGCAGATGTTTGTTTGTATCTTGAACTTGTGTGCGAAGAGGTTGGATTTTGAGCTTGGGAGGCAAATTCATGGCGTTATTGTGAAAGGTAATCGCGGGAATTTGATTGTTGACAGTGCCATTATTTACTTTTATGCACAATGTAAAGATATTTCCAGTGCTTTTGTTGCATTTGAACGTATGCGGAGGCGTGACGTTGTTTGTTGGACTTCTATGATTACTTCTTGTTCCCAACAAGGGCTTGGACAAGAAGCGATTTCGATGTTCTCTAATATGCTAAGCGATGGATTTCTACCAAATGAGTTTTCCGTATGCAGTGTTCTCAAGGCTTGTGGAGAAGAGAGGGAATTGAAGATTGGGAGACAGTTACATGGTTTGGTAATTAAGAAAATAATCAAGAATGACGTTTTTGTTGGGACTTCATTGGTTGATATGTATGCCAAGTGCGGGAACTTGGTGGATTCTAGAGAAGTATTCGATGGGATGAGGAATAGGAACACGGTTACGTGGACGTCAATCATAGCTGGTTATGCACGGGAGGGGCTCGGTGAGGAGGCTCTGAACCTCTTTAGGTTGATGAAGAGGCAAAGGATTCCTGCCAATAACTTAACCATTGTAAGTATTCTCCGCGCTTGTGGCTCGATTGAGGCATCATTGACTGGGAGGGAAGTTCATGCCCAGATTGTAAAAAATTCATTTCAAACTAATATACACATAGGAAGCACTCTAGTTTGGTTCTACTGTAAGTGTAGGAATCAACTTAAGGCCTCGATGGTTCTTCAGCTGATGCCGCTTAGAGATGTGGTTTCTTGGACAGCCATCATTTCTGGATGTGCTCATCTTGGGCACGAGTCCGAGGCACTTGAGTTTCTAAAAAACATGATAGAGGAAGGTGTTGAACCAAATTCCTTTACTTATTCGTCAACTTTAAAAGCGTGTGCCAAGATGGAAGCTATCCTCCAAGGGAAAATGATCCACTCTTCCGCAAATAAAACATCTGCGTTGTCCAATGTTTTTGTGGGAAGTGCACTGATTTACATGTATGCAAAATGTGGATATGTAACCGAAGCTTCTCAAGTTTTCGACAGTATGCCGGTGAGGAATTTGGTTTCTTGGAAGGCCATGATTTTGTGTTATGCTAGGAATGGTCTGTGCCGAGAGGCATTAAAGCTCATGTATCGGATGCAAGCTGAAGGTTTCGAAGTGGACGATTACATTCTTGGAACAGTTTATGGAGCTTGTGGAGATGTGAAATGTGATGTGGATTCATCATTTGAACATAGTTTGCAAACTCATTGATCTCCCAGTTTGAATGGTTATCTAGATTCGACATTTGACGACGGAAATCTTGCCATCTCAAGGAGGTTTGCACTGGTTCATCCTGTTTTATTTGGAATGCCAATGATCTGAAGAACTTTCTTGTGCTCTTTATCACTCCATAAATCAAAATTTTTGAAGAGGGGAGAAACAAATCATTGAACTCTACCCCACCTGGCTGAGATGATTTATCTGCTCTATGCAACATAACATGTATTTTACAACCCACGCCTACTTAATTGTAAAAAAATCCAATGTAATCTTTGTAAATCCATACCTATCTAGCTGCAGTTCTATGAATAGGCCCTACTTAAATTTGCTTTTCATATGATAGAACACTATAAATTCTTAGGAATGTAAAACCAAATGATTCAAACTTTCGATCATGAATATATGTTTTAACCATCTTTAAGATTGCTTAGATTATATATCTCCCACTATTTTTTG

Coding sequence (CDS)

ATGGGAATTACCAATTTTGCCCCCAGCCCCAACGAGGAAGTCCAACCGACCAACGGCTCTGCTTCAAATTATCCGGTGAAATTAAGACATACTAATTTTCAACCCGAATTTGTGGCCGTGGCGGGAACTTCAAACCACTTTCCGGCTATGTTCTCGCCGGCGTTCATCTCAACGGCTATCACTTCTCAATCACCGCCTTGTTTAACTTTTCAACGAACGTCAACGTCACAATCGGCCCGGCGGACCTGTTCCAAACGGAACCTCACTACTTTCAACCGTTATAAAAGCTCCACAAATTTCCCGTTCAAATTTGTCGAAGACCAATCCAAGGCTTTTTCGATCGCATGCACAACGGCAAAGTGTACTACTACTGAAGAATACGCCGATGTCGAATCTTGCAGCAATCAGTCGGTGAGTGGATGTCTGAGTCACTATTTGATTGGGGTTTGGCTTCGCTCTAGTCGTAGCGTCAAGAAATTAAGGGCGGTACATGCTTTCATTTTGCGGCATTTTACAAGTTTTTCGATCTATGTTGGAAACAATTTGCTTAGTTCTTACTTAAGAGTCGGAATGTTGGTTGATGCTAGAAAGGTGTTCGATGAAATGCCAATGAGGAGTGTTGTAACATGGACGGCTATTATTAATGGGTATATTGATTTAGATTTGACTGAAGAAGCTTTAGCGTTGTTCAGTGATTCGGTTAAGAGCGGGGTGCTGGCGAATGGGCAGATGTTTGTTTGTATCTTGAACTTGTGTGCGAAGAGGTTGGATTTTGAGCTTGGGAGGCAAATTCATGGCGTTATTGTGAAAGGTAATCGCGGGAATTTGATTGTTGACAGTGCCATTATTTACTTTTATGCACAATGTAAAGATATTTCCAGTGCTTTTGTTGCATTTGAACGTATGCGGAGGCGTGACGTTGTTTGTTGGACTTCTATGATTACTTCTTGTTCCCAACAAGGGCTTGGACAAGAAGCGATTTCGATGTTCTCTAATATGCTAAGCGATGGATTTCTACCAAATGAGTTTTCCGTATGCAGTGTTCTCAAGGCTTGTGGAGAAGAGAGGGAATTGAAGATTGGGAGACAGTTACATGGTTTGGTAATTAAGAAAATAATCAAGAATGACGTTTTTGTTGGGACTTCATTGGTTGATATGTATGCCAAGTGCGGGAACTTGGTGGATTCTAGAGAAGTATTCGATGGGATGAGGAATAGGAACACGGTTACGTGGACGTCAATCATAGCTGGTTATGCACGGGAGGGGCTCGGTGAGGAGGCTCTGAACCTCTTTAGGTTGATGAAGAGGCAAAGGATTCCTGCCAATAACTTAACCATTGTAAGTATTCTCCGCGCTTGTGGCTCGATTGAGGCATCATTGACTGGGAGGGAAGTTCATGCCCAGATTGTAAAAAATTCATTTCAAACTAATATACACATAGGAAGCACTCTAGTTTGGTTCTACTGTAAGTGTAGGAATCAACTTAAGGCCTCGATGGTTCTTCAGCTGATGCCGCTTAGAGATGTGGTTTCTTGGACAGCCATCATTTCTGGATGTGCTCATCTTGGGCACGAGTCCGAGGCACTTGAGTTTCTAAAAAACATGATAGAGGAAGGTGTTGAACCAAATTCCTTTACTTATTCGTCAACTTTAAAAGCGTGTGCCAAGATGGAAGCTATCCTCCAAGGGAAAATGATCCACTCTTCCGCAAATAAAACATCTGCGTTGTCCAATGTTTTTGTGGGAAGTGCACTGATTTACATGTATGCAAAATGTGGATATGTAACCGAAGCTTCTCAAGTTTTCGACAGTATGCCGGTGAGGAATTTGGTTTCTTGGAAGGCCATGATTTTGTGTTATGCTAGGAATGGTCTGTGCCGAGAGGCATTAAAGCTCATGTATCGGATGCAAGCTGAAGGTTTCGAAGTGGACGATTACATTCTTGGAACAGTTTATGGAGCTTGTGGAGATGTGAAATGTGATGTGGATTCATCATTTGAACATAGTTTGCAAACTCATTGA

Protein sequence

MGITNFAPSPNEEVQPTNGSASNYPVKLRHTNFQPEFVAVAGTSNHFPAMFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQSKAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACGDVKCDVDSSFEHSLQTH

Homology

[Close]

BLAST of Cmc03g0060701.1 vs. NCBI nr
Match: TYK06655.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 623/624 (99.84%), Postives = 624/624 (100.00%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIGRQLHGL+IKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQTH 674
           TVYGACGDVKCDVDSSFEHSLQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Cmc03g0060701.1 vs. NCBI nr
Match: XP_008441245.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g18520 [Cucumis melo])

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 622/624 (99.68%), Postives = 623/624 (99.84%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFERM RRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMGRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIGRQLHGL+IKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQTH 674
           TVYGACGDVKCDVDSSFEHSLQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Cmc03g0060701.1 vs. NCBI nr
Match: XP_004138810.1 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic [Cucumis sativus] >KGN63116.1 hypothetical protein Csa_022382 [Cucumis sativus])

HSP 1 Score: 1172.9 bits (3033), Expect = 0.0e+00
Identity = 593/624 (95.03%), Postives = 601/624 (96.31%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           MFSPA I     SQSPPCLTFQ TSTS S RRTCSK NLTTFNR KSST+FPF FVED S
Sbjct: 1   MFSPAII-----SQSPPCLTFQPTSTSLSTRRTCSKWNLTTFNRCKSSTSFPFNFVEDHS 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           KA  +AC T KCTTTEEYADVESCSNQSVSGCLS YLIGVWLRSSRSVKKLRAVHAFILR
Sbjct: 61  KALPVACATGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           +FTSF IYVGNNLLSSYLR+GMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 NFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLG+EAISMFSNMLSD FLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIGRQLHGL+IKKIIKNDVFVGTSLVDMYAKCGNL DSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEA+LQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQTH 674
           TVYGACGDVKCDVDSS E+ LQTH
Sbjct: 601 TVYGACGDVKCDVDSSLEYRLQTH 619

[Close]

BLAST of Cmc03g0060701.1 vs. NCBI nr
Match: KAG7015915.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 554/666 (83.18%), Postives = 595/666 (89.34%), Query Frame = 0


Query: 13  EVQPTNGSASNYPVK------LRHTNFQPEFVAVAGTSNHFPAMFSPAFISTAITSQSPP 72
           EVQPTNGSASNYPVK       R   F+P  VAVAG+SN+FPAM SPAFISTA  SQSPP
Sbjct: 3   EVQPTNGSASNYPVKSLDILIFRGLGFRPNIVAVAGSSNNFPAMLSPAFISTATISQSPP 62

Query: 73  CLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQSKAFSIACTTAKCTTTEE 132
           C + Q    S S RR CSK NLT+ +R KS TN  F F++D  +A  +ACTT  C T +E
Sbjct: 63  CFSVQPPPISLSTRRACSKWNLTSIDRCKSPTNLRFNFIKDPFRASLVACTTETC-TAQE 122

Query: 133 YADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILRHFTSFSIYVGNNLLSSY 192
             DVESCSN+ V+GCLS YLI  WLRSSR VK+LRA+HAFILRHF+S   YVGNNL+SSY
Sbjct: 123 CTDVESCSNEPVNGCLSPYLIAAWLRSSRGVKELRAIHAFILRHFSSLVTYVGNNLISSY 182

Query: 193 LRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGVLANGQMFV 252
           LR GML+DAR+VFDEMPMRSVVTWTAIINGYID DLT+EAL LF DSV+SGV ANG+MFV
Sbjct: 183 LRFGMLIDARRVFDEMPMRSVVTWTAIINGYIDFDLTDEALGLFGDSVRSGVRANGKMFV 242

Query: 253 CILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRD 312
           CILNLCAKRLDFELGRQIHG IVKGN GNLIVDSAI+YFYAQCKDISSAFVAFE M +RD
Sbjct: 243 CILNLCAKRLDFELGRQIHGAIVKGNWGNLIVDSAIVYFYAQCKDISSAFVAFEHMPKRD 302

Query: 313 VVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHG 372
           +VCWTSMITSCSQQGLG+EAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIG+QLHG
Sbjct: 303 IVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGKQLHG 362

Query: 373 LVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTVTWTSIIAGYAREGLGEE 432
           LVIKKIIKNDVFVG+SLVDMYAK G+L DSREVFD MRNRNTVTWTSIIAGYAREGLGEE
Sbjct: 363 LVIKKIIKNDVFVGSSLVDMYAKSGSLADSREVFDEMRNRNTVTWTSIIAGYAREGLGEE 422

Query: 433 ALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVW 492
           A+NLFRLM +QR+PAN+LTIVSILRACGSI ASLTGREVHAQIVKNSFQTN+HIGSTLVW
Sbjct: 423 AVNLFRLMNKQRVPANDLTIVSILRACGSIGASLTGREVHAQIVKNSFQTNLHIGSTLVW 482

Query: 493 FYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFT 552
           FYCKCRNQ KASMVLQ MPLRDVVSWTAIISGCAHLGHESEALEFL+NMIEEGVEPNSFT
Sbjct: 483 FYCKCRNQPKASMVLQQMPLRDVVSWTAIISGCAHLGHESEALEFLENMIEEGVEPNSFT 542

Query: 553 YSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMP 612
           YSS LKACAKMEAILQG++IHSSANKTSA+SNVFVGSALIYMYAKCGYVTEASQVFDSMP
Sbjct: 543 YSSALKACAKMEAILQGRLIHSSANKTSAVSNVFVGSALIYMYAKCGYVTEASQVFDSMP 602

Query: 613 VRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACGDVKCDVDSSF 672
            RNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDD+I GTVYG CGDVKC+VDSS 
Sbjct: 603 ERNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDHIFGTVYGVCGDVKCEVDSSL 662

[Close]

BLAST of Cmc03g0060701.1 vs. NCBI nr
Match: XP_038884364.1 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 542/624 (86.86%), Postives = 575/624 (92.15%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           M SPAFISTA  S  PPC + Q   T  +ARRTCSK N T+ +  KSSTNF   FV+D S
Sbjct: 1   MLSPAFISTATISHPPPCFSVQPPPTLLTARRTCSKWNFTSIDHCKSSTNFRLNFVKDLS 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           +A  +AC  A+  TT+EYA+VESCS+QSVSGCLS YLI VWLRSSRS K+LRA+HAFILR
Sbjct: 61  RASPVAC-IAETFTTQEYANVESCSSQSVSGCLSPYLIAVWLRSSRSAKELRAIHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           H TSF IYVGNNL+SSYLR GMLVDARK FDEMP+R+VVTWT IINGYI LD TEEAL L
Sbjct: 121 HITSFEIYVGNNLVSSYLRFGMLVDARKAFDEMPVRNVVTWTTIINGYIHLDFTEEALGL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           FSDSVK+GV ANG+MFVCILNLCAKRLDFELGRQIHGVIVKGN GNLI+DSAI+YFYAQC
Sbjct: 181 FSDSVKNGVQANGKMFVCILNLCAKRLDFELGRQIHGVIVKGNWGNLIIDSAIVYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFE M +RDVVCWTSMITSCSQQGLG+EAIS+FSNML+DGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFEHMPKRDVVCWTSMITSCSQQGLGREAISLFSNMLNDGFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIGRQLHGL+IKKIIKNDVFVGTSLVDMYAKCGNL DSREVF+GMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFNGMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREG GEEA+NLFRLMKRQRIPANNLTIVSILRACGSI ASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGRGEEAVNLFRLMKRQRIPANNLTIVSILRACGSIGASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VK+SFQTNIHIGSTLVWFYCKCRN+LKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKSSFQTNIHIGSTLVWFYCKCRNRLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFLKNM+EEGVEPNSFTYSS LKACAKMEAILQGK+IHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMVEEGVEPNSFTYSSALKACAKMEAILQGKLIHSSANKTSALSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDYILG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQTH 674
           TVYGACGDVKCDVDSS E+ LQT+
Sbjct: 601 TVYGACGDVKCDVDSSLEYRLQTY 623

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy Swiss-Prot
Match: Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 1.5e-198
Identity = 335/534 (62.73%), Postives = 425/534 (79.59%), Query Frame = 0


Query: 142 LSHYLIGVWLRSSRSVKKLRAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDE 201
           + + L+  WL+SS  ++ ++ +HA  L+ F    IY GNNL+SS +R+G LV ARKVFD 
Sbjct: 83  VDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDS 142

Query: 202 MPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGV-LANGQMFVCILNLCAKRLDFEL 261
           MP ++ VTWTA+I+GY+   L +EA ALF D VK G+   N +MFVC+LNLC++R +FEL
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202

Query: 262 GRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQ 321
           GRQ+HG +VK   GNLIV+S+++YFYAQC +++SA  AF+ M  +DV+ WT++I++CS++
Sbjct: 203 GRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262

Query: 322 GLGQEAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVG 381
           G G +AI MF  ML+  FLPNEF+VCS+LKAC EE+ L+ GRQ+H LV+K++IK DVFVG
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322

Query: 382 TSLVDMYAKCGNLVDSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIP 441
           TSL+DMYAKCG + D R+VFDGM NRNTVTWTSIIA +AREG GEEA++LFR+MKR+ + 
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382

Query: 442 ANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMV 501
           ANNLT+VSILRACGS+ A L G+E+HAQI+KNS + N++IGSTLVW YCKC     A  V
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442

Query: 502 LQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAI 561
           LQ +P RDVVSWTA+ISGC+ LGHESEAL+FLK MI+EGVEPN FTYSS LKACA  E++
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502

Query: 562 LQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCY 621
           L G+ IHS A K  ALSNVFVGSALI+MYAKCG+V+EA +VFDSMP +NLVSWKAMI+ Y
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562

Query: 622 ARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACGDVKCD--VDSSFEHSLQT 673
           ARNG CREALKLMYRM+AEGFEVDDYI  T+   CGD++ D  V+SS    L+T
Sbjct: 563 ARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVESSATCYLET 616

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.9e-77
Identity = 165/515 (32.04%), Postives = 282/515 (54.76%), Query Frame = 0


Query: 161 RAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDL 220
           R  HA +++  +   IYV  +L+  Y + G++ D  KVF  MP R+  TW+ +++GY   
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197

Query: 221 DLTEEALALFSDSV--KSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-GNRGNLI 280
              EEA+ +F+  +  K     +  +F  +L+  A  +   LGRQIH + +K G  G + 
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257

Query: 281 VDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDG 340
           + +A++  Y++C+ ++ A   F+    R+ + W++M+T  SQ G   EA+ +FS M S G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317

Query: 341 FLPNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSR 400
             P+E+++  VL AC +   L+ G+QLH  ++K   +  +F  T+LVDMYAK G L D+R
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377

Query: 401 EVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIE 460
           + FD ++ R+   WTS+I+GY +    EEAL L+R MK   I  N+ T+ S+L+AC S+ 
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437

Query: 461 ASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIIS 520
               G++VH   +K+ F   + IGS L   Y KC +    ++V +  P +DVVSW A+IS
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497

Query: 521 GCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALS 580
           G +H G   EALE  + M+ EG+EP+  T+ + + AC+    + +G    +  +    L 
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557

Query: 581 -NVFVGSALIYMYAKCGYVTEASQVFDSMPV-RNLVSWKAMILCYARNGLCREALKLMYR 640
             V   + ++ + ++ G + EA +  +S  +   L  W+ ++     +G C   +    +
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617

Query: 641 MQAEGF-EVDDYI-LGTVYGACGDVKCDVDSSFEH 669
           + A G  E   Y+ L  +Y A G ++ DV+  ++H
Sbjct: 618 LMALGSRESSTYVQLSGIYTALGRMR-DVERVWKH 651

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy Swiss-Prot
Match: Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.7e-76
Identity = 169/509 (33.20%), Postives = 268/509 (52.65%), Query Frame = 0


Query: 153 SSRSVKKLRAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTA 212
           SSRS+ + R +H  IL     +   + N++LS Y + G L DAR+VFD MP R++V++T+
Sbjct: 79  SSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTS 138

Query: 213 IINGYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-G 272
           +I GY       EA+ L+   ++  ++ +   F  I+  CA   D  LG+Q+H  ++K  
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198

Query: 273 NRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFS 332
           +  +LI  +A+I  Y +   +S A   F  +  +D++ W+S+I   SQ G   EA+S   
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258

Query: 333 NMLSDG-FLPNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKC 392
            MLS G F PNE+   S LKAC        G Q+HGL IK  +  +   G SL DMYA+C
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318

Query: 393 GNLVDSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSIL 452
           G L  +R VFD +   +T +W  IIAG A  G  +EA+++F  M+      + +++ S+L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378

Query: 453 RACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDV 512
            A     A   G ++H+ I+K  F  ++ + ++L+  Y  C +     ++        D 
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438

Query: 513 VSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSS 572
           VSW  I++ C       E L   K M+    EP+  T  + L+ C ++ ++  G  +H  
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498

Query: 573 ANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREA 632
           + KT      F+ + LI MYAKCG + +A ++FDSM  R++VSW  +I+ YA++G   EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558

Query: 633 LKLMYRMQAEGFEVDDYILGTVYGACGDV 659
           L L   M++ G E +      V  AC  V
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHV 587

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.3e-74
Identity = 168/497 (33.80%), Postives = 269/497 (54.12%), Query Frame = 0


Query: 163 VHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDL 222
           VHA  ++   + +IYVG++L+S Y +   +  A KVF+ +  ++ V W A+I GY     
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408

Query: 223 TEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRG-NLIVDSA 282
           + + + LF D   SG   +   F  +L+ CA   D E+G Q H +I+K     NL V +A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468

Query: 283 IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPN 342
           ++  YA+C  +  A   FERM  RD V W ++I S  Q     EA  +F  M   G + +
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528

Query: 343 EFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFD 402
              + S LKAC     L  G+Q+H L +K  +  D+  G+SL+DMY+KCG + D+R+VF 
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588

Query: 403 GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 462
            +   + V+  ++IAGY++  L EEA+ LF+ M  + +  + +T  +I+ AC   E+   
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 648

Query: 463 GREVHAQIVKNSFQT-NIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDVVSWTAIISGC 522
           G + H QI K  F +   ++G +L+  Y   R   +A ++  +L   + +V WT ++SG 
Sbjct: 649 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 708

Query: 523 AHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNV 582
           +  G   EAL+F K M  +GV P+  T+ + L+ C+ + ++ +G+ IHS     +   + 
Sbjct: 709 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 768

Query: 583 FVGSALIYMYAKCGYVTEASQVFDSMPVR-NLVSWKAMILCYARNGLCREALKLMYRMQA 642
              + LI MYAKCG +  +SQVFD M  R N+VSW ++I  YA+NG   +ALK+   M+ 
Sbjct: 769 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 828

Query: 643 EGFEVDDYILGTVYGAC 656
                D+     V  AC
Sbjct: 829 SHIMPDEITFLGVLTAC 844

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy Swiss-Prot
Match: Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.4e-73
Identity = 167/498 (33.53%), Postives = 267/498 (53.61%), Query Frame = 0


Query: 161 RAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDL 220
           R +H   ++      + VG +L+ +Y++     D RKVFDEM  R+VVTWT +I+GY   
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172

Query: 221 DLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLI-VD 280
            + +E L LF      G   N   F   L + A+      G Q+H V+VK      I V 
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232

Query: 281 SAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFL 340
           +++I  Y +C ++  A + F++   + VV W SMI+  +  GL  EA+ MF +M  +   
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292

Query: 341 PNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREV 400
            +E S  SV+K C   +EL+   QLH  V+K     D  + T+L+  Y+KC  ++D+  +
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352

Query: 401 FDGMR-NRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEA 460
           F  +    N V+WT++I+G+ +    EEA++LF  MKR+ +  N  T   IL A   I  
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412

Query: 461 SLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISG 520
           S    EVHAQ+VK +++ +  +G+ L+  Y K     +A+ V   +  +D+V+W+A+++G
Sbjct: 413 S----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 472

Query: 521 CAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAIL-QGKMIHSSANKTSALS 580
            A  G    A++    + + G++PN FT+SS L  CA   A + QGK  H  A K+   S
Sbjct: 473 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 532

Query: 581 NVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQ 640
           ++ V SAL+ MYAK G +  A +VF     ++LVSW +MI  YA++G   +AL +   M+
Sbjct: 533 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 592

Query: 641 AEGFEVDDYILGTVYGAC 656
               ++D      V+ AC
Sbjct: 593 KRKVKMDGVTFIGVFAAC 606

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy TrEMBL
Match: A0A5D3C5K1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001360 PE=4 SV=1)

HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 623/624 (99.84%), Postives = 624/624 (100.00%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIGRQLHGL+IKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQTH 674
           TVYGACGDVKCDVDSSFEHSLQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy TrEMBL
Match: A0A1S3B3M7 (pentatricopeptide repeat-containing protein At4g18520 OS=Cucumis melo OX=3656 GN=LOC103485432 PE=4 SV=1)

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 622/624 (99.68%), Postives = 623/624 (99.84%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFERM RRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMGRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIGRQLHGL+IKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQTH 674
           TVYGACGDVKCDVDSSFEHSLQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy TrEMBL
Match: A0A0A0LSX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403710 PE=4 SV=1)

HSP 1 Score: 1172.9 bits (3033), Expect = 0.0e+00
Identity = 593/624 (95.03%), Postives = 601/624 (96.31%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           MFSPA I     SQSPPCLTFQ TSTS S RRTCSK NLTTFNR KSST+FPF FVED S
Sbjct: 1   MFSPAII-----SQSPPCLTFQPTSTSLSTRRTCSKWNLTTFNRCKSSTSFPFNFVEDHS 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           KA  +AC T KCTTTEEYADVESCSNQSVSGCLS YLIGVWLRSSRSVKKLRAVHAFILR
Sbjct: 61  KALPVACATGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           +FTSF IYVGNNLLSSYLR+GMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 NFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLG+EAISMFSNMLSD FLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIGRQLHGL+IKKIIKNDVFVGTSLVDMYAKCGNL DSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEA+LQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQTH 674
           TVYGACGDVKCDVDSS E+ LQTH
Sbjct: 601 TVYGACGDVKCDVDSSLEYRLQTH 619

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy TrEMBL
Match: A0A6J1FJ52 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444741 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 8.2e-304
Identity = 526/623 (84.43%), Postives = 564/623 (90.53%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           M SPAFISTA  SQSPPC + Q    S S RR CSK NLT+ +R KS TN  F F++D  
Sbjct: 1   MLSPAFISTATISQSPPCFSVQPPPISLSTRRACSKWNLTSIDRCKSPTNLRFNFIKDPF 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           +A  +ACTT  C T +E  DVESCSN+ V+GCLS YLI  WLRSSR VK+LRA+HAFILR
Sbjct: 61  RASLVACTTETC-TAQECTDVESCSNEPVNGCLSPYLIAAWLRSSRGVKELRAIHAFILR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           HF+S   YVGNNL+SSYLR GML+DAR+VFDEMPMRSVVTWTAIINGYID DLT+EAL L
Sbjct: 121 HFSSLVTYVGNNLISSYLRFGMLIDARRVFDEMPMRSVVTWTAIINGYIDFDLTDEALGL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           F DSV+SGV ANG+MFVCILNLCAKRLDFELGRQIHG IVKGN GNLIVDSAI+YFYAQC
Sbjct: 181 FGDSVRSGVRANGKMFVCILNLCAKRLDFELGRQIHGAIVKGNWGNLIVDSAIVYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFE M +RD+VCWTSMITSCSQQGLG+EAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFEHMPKRDIVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIG+QLHGLVIKKIIKNDVFVG+SLVDMYAK G+L DSREVFD MRNRNTV
Sbjct: 301 KACGEERELKIGKQLHGLVIKKIIKNDVFVGSSLVDMYAKSGSLADSREVFDEMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEA+NLFRLM +QR+PAN+LTIVSILRACGSI ASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEAVNLFRLMNKQRVPANDLTIVSILRACGSIGASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTN+HIGSTLVWFYCKCRNQ KASMVLQ MPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNLHIGSTLVWFYCKCRNQPKASMVLQQMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFL+NMIEEGVEPNSFTYSS LKACAKMEAILQG++IHSSANKTSA+SNVFVGSALIYMY
Sbjct: 481 EFLENMIEEGVEPNSFTYSSALKACAKMEAILQGRLIHSSANKTSAVSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMP RNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDD+I G
Sbjct: 541 AKCGYVTEASQVFDSMPERNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDHIFG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQT 673
           TVYG CGDVKC+VDSS E+SLQT
Sbjct: 601 TVYGVCGDVKCEVDSSLEYSLQT 622

[Close]

BLAST of Cmc03g0060701.1 vs. ExPASy TrEMBL
Match: A0A6J1JUB8 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489800 PE=4 SV=1)

HSP 1 Score: 1048.5 bits (2710), Expect = 1.2e-302
Identity = 524/623 (84.11%), Postives = 562/623 (90.21%), Query Frame = 0


Query: 50  MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 109
           M SPAFISTA  SQSPPC + Q    S S RR CSK NLT+ +R KS TN  F F++D  
Sbjct: 1   MLSPAFISTATISQSPPCFSVQPPPISLSTRRACSKWNLTSIDRCKSPTNLRFNFIKDPF 60

Query: 110 KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 169
           +A  +ACTT  C T +E  DVESCSN+ V+GCLS YLI  WLRSSR VK+LRA+HAFI R
Sbjct: 61  RASLVACTTETC-TAQECTDVESCSNEPVNGCLSPYLIAAWLRSSRGVKELRAIHAFIWR 120

Query: 170 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 229
           HFTS   YVGNNL+SSYLR GML+DAR+VFDEMPMRSVVTWTAIINGYID DLT+EAL L
Sbjct: 121 HFTSLVTYVGNNLISSYLRFGMLIDARRVFDEMPMRSVVTWTAIINGYIDFDLTDEALGL 180

Query: 230 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 289
           F DSV+SGV  NG+MFVCILNLCAKRLDFELGRQIHG IVKGN GNLIVDSAI+YFYAQC
Sbjct: 181 FGDSVRSGVRVNGKMFVCILNLCAKRLDFELGRQIHGAIVKGNWGNLIVDSAIVYFYAQC 240

Query: 290 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 349
           KDISSAFVAFE M +RD+VCWTSMITSCSQQGLG+EAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFEHMPKRDIVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 350 KACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 409
           KACGEERELKIG+QLHGLVIKKIIKNDVFVG+SLVDMYAK G+L DSREVFD MRNRNTV
Sbjct: 301 KACGEERELKIGKQLHGLVIKKIIKNDVFVGSSLVDMYAKSGSLADSREVFDEMRNRNTV 360

Query: 410 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 469
           TWTSIIAGYAREGLGEEA+NLFRLM +QR+PAN+LTIVSILRACGSI ASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEAVNLFRLMNKQRVPANDLTIVSILRACGSIGASLTGREVHAQI 420

Query: 470 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 529
           VKNSFQTN+HIGSTLVWFYCKCRNQ KASMVLQ MPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNLHIGSTLVWFYCKCRNQPKASMVLQQMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 530 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 589
           EFL+NMIEEGVEPNSFTYSS LKACAKMEAILQG++IHSSANK+SA+SNVFVGSALIYMY
Sbjct: 481 EFLENMIEEGVEPNSFTYSSALKACAKMEAILQGRLIHSSANKSSAVSNVFVGSALIYMY 540

Query: 590 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 649
           AKCGYVTEASQVFDSMP RNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDD+I G
Sbjct: 541 AKCGYVTEASQVFDSMPERNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDHIFG 600

Query: 650 TVYGACGDVKCDVDSSFEHSLQT 673
           TVYG CGDVKC+VDSS E+SLQT
Sbjct: 601 TVYGVCGDVKCEVDSSLEYSLQT 622

[Close]

BLAST of Cmc03g0060701.1 vs. TAIR 10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 694.1 bits (1790), Expect = 1.1e-199
Identity = 335/534 (62.73%), Postives = 425/534 (79.59%), Query Frame = 0


Query: 142 LSHYLIGVWLRSSRSVKKLRAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDE 201
           + + L+  WL+SS  ++ ++ +HA  L+ F    IY GNNL+SS +R+G LV ARKVFD 
Sbjct: 83  VDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDS 142

Query: 202 MPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGV-LANGQMFVCILNLCAKRLDFEL 261
           MP ++ VTWTA+I+GY+   L +EA ALF D VK G+   N +MFVC+LNLC++R +FEL
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202

Query: 262 GRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQ 321
           GRQ+HG +VK   GNLIV+S+++YFYAQC +++SA  AF+ M  +DV+ WT++I++CS++
Sbjct: 203 GRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262

Query: 322 GLGQEAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVG 381
           G G +AI MF  ML+  FLPNEF+VCS+LKAC EE+ L+ GRQ+H LV+K++IK DVFVG
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322

Query: 382 TSLVDMYAKCGNLVDSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIP 441
           TSL+DMYAKCG + D R+VFDGM NRNTVTWTSIIA +AREG GEEA++LFR+MKR+ + 
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382

Query: 442 ANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMV 501
           ANNLT+VSILRACGS+ A L G+E+HAQI+KNS + N++IGSTLVW YCKC     A  V
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442

Query: 502 LQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAI 561
           LQ +P RDVVSWTA+ISGC+ LGHESEAL+FLK MI+EGVEPN FTYSS LKACA  E++
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502

Query: 562 LQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCY 621
           L G+ IHS A K  ALSNVFVGSALI+MYAKCG+V+EA +VFDSMP +NLVSWKAMI+ Y
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562

Query: 622 ARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACGDVKCD--VDSSFEHSLQT 673
           ARNG CREALKLMYRM+AEGFEVDDYI  T+   CGD++ D  V+SS    L+T
Sbjct: 563 ARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVESSATCYLET 616

[Close]

BLAST of Cmc03g0060701.1 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 290.8 bits (743), Expect = 2.8e-78
Identity = 165/515 (32.04%), Postives = 282/515 (54.76%), Query Frame = 0


Query: 161 RAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDL 220
           R  HA +++  +   IYV  +L+  Y + G++ D  KVF  MP R+  TW+ +++GY   
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197

Query: 221 DLTEEALALFSDSV--KSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-GNRGNLI 280
              EEA+ +F+  +  K     +  +F  +L+  A  +   LGRQIH + +K G  G + 
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257

Query: 281 VDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDG 340
           + +A++  Y++C+ ++ A   F+    R+ + W++M+T  SQ G   EA+ +FS M S G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317

Query: 341 FLPNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSR 400
             P+E+++  VL AC +   L+ G+QLH  ++K   +  +F  T+LVDMYAK G L D+R
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377

Query: 401 EVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIE 460
           + FD ++ R+   WTS+I+GY +    EEAL L+R MK   I  N+ T+ S+L+AC S+ 
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437

Query: 461 ASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIIS 520
               G++VH   +K+ F   + IGS L   Y KC +    ++V +  P +DVVSW A+IS
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497

Query: 521 GCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALS 580
           G +H G   EALE  + M+ EG+EP+  T+ + + AC+    + +G    +  +    L 
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557

Query: 581 -NVFVGSALIYMYAKCGYVTEASQVFDSMPV-RNLVSWKAMILCYARNGLCREALKLMYR 640
             V   + ++ + ++ G + EA +  +S  +   L  W+ ++     +G C   +    +
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617

Query: 641 MQAEGF-EVDDYI-LGTVYGACGDVKCDVDSSFEH 669
           + A G  E   Y+ L  +Y A G ++ DV+  ++H
Sbjct: 618 LMALGSRESSTYVQLSGIYTALGRMR-DVERVWKH 651

[Close]

BLAST of Cmc03g0060701.1 vs. TAIR 10
Match: AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 287.0 bits (733), Expect = 4.0e-77
Identity = 169/509 (33.20%), Postives = 268/509 (52.65%), Query Frame = 0


Query: 153 SSRSVKKLRAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTA 212
           SSRS+ + R +H  IL     +   + N++LS Y + G L DAR+VFD MP R++V++T+
Sbjct: 79  SSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTS 138

Query: 213 IINGYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-G 272
           +I GY       EA+ L+   ++  ++ +   F  I+  CA   D  LG+Q+H  ++K  
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198

Query: 273 NRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFS 332
           +  +LI  +A+I  Y +   +S A   F  +  +D++ W+S+I   SQ G   EA+S   
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258

Query: 333 NMLSDG-FLPNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKC 392
            MLS G F PNE+   S LKAC        G Q+HGL IK  +  +   G SL DMYA+C
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318

Query: 393 GNLVDSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSIL 452
           G L  +R VFD +   +T +W  IIAG A  G  +EA+++F  M+      + +++ S+L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378

Query: 453 RACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDV 512
            A     A   G ++H+ I+K  F  ++ + ++L+  Y  C +     ++        D 
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438

Query: 513 VSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSS 572
           VSW  I++ C       E L   K M+    EP+  T  + L+ C ++ ++  G  +H  
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498

Query: 573 ANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREA 632
           + KT      F+ + LI MYAKCG + +A ++FDSM  R++VSW  +I+ YA++G   EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558

Query: 633 LKLMYRMQAEGFEVDDYILGTVYGACGDV 659
           L L   M++ G E +      V  AC  V
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHV 587

[Close]

BLAST of Cmc03g0060701.1 vs. TAIR 10
Match: AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 3.8e-75
Identity = 168/497 (33.80%), Postives = 269/497 (54.12%), Query Frame = 0


Query: 163 VHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDL 222
           VHA  ++   + +IYVG++L+S Y +   +  A KVF+ +  ++ V W A+I GY     
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408

Query: 223 TEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRG-NLIVDSA 282
           + + + LF D   SG   +   F  +L+ CA   D E+G Q H +I+K     NL V +A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468

Query: 283 IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPN 342
           ++  YA+C  +  A   FERM  RD V W ++I S  Q     EA  +F  M   G + +
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528

Query: 343 EFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFD 402
              + S LKAC     L  G+Q+H L +K  +  D+  G+SL+DMY+KCG + D+R+VF 
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588

Query: 403 GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 462
            +   + V+  ++IAGY++  L EEA+ LF+ M  + +  + +T  +I+ AC   E+   
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 648

Query: 463 GREVHAQIVKNSFQT-NIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDVVSWTAIISGC 522
           G + H QI K  F +   ++G +L+  Y   R   +A ++  +L   + +V WT ++SG 
Sbjct: 649 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 708

Query: 523 AHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNV 582
           +  G   EAL+F K M  +GV P+  T+ + L+ C+ + ++ +G+ IHS     +   + 
Sbjct: 709 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 768

Query: 583 FVGSALIYMYAKCGYVTEASQVFDSMPVR-NLVSWKAMILCYARNGLCREALKLMYRMQA 642
              + LI MYAKCG +  +SQVFD M  R N+VSW ++I  YA+NG   +ALK+   M+ 
Sbjct: 769 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 828

Query: 643 EGFEVDDYILGTVYGAC 656
                D+     V  AC
Sbjct: 829 SHIMPDEITFLGVLTAC 844

[Close]

BLAST of Cmc03g0060701.1 vs. TAIR 10
Match: AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 277.7 bits (709), Expect = 2.4e-74
Identity = 167/498 (33.53%), Postives = 267/498 (53.61%), Query Frame = 0


Query: 161 RAVHAFILRHFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDL 220
           R +H   ++      + VG +L+ +Y++     D RKVFDEM  R+VVTWT +I+GY   
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172

Query: 221 DLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLI-VD 280
            + +E L LF      G   N   F   L + A+      G Q+H V+VK      I V 
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232

Query: 281 SAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFL 340
           +++I  Y +C ++  A + F++   + VV W SMI+  +  GL  EA+ MF +M  +   
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292

Query: 341 PNEFSVCSVLKACGEERELKIGRQLHGLVIKKIIKNDVFVGTSLVDMYAKCGNLVDSREV 400
            +E S  SV+K C   +EL+   QLH  V+K     D  + T+L+  Y+KC  ++D+  +
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352

Query: 401 FDGMR-NRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEA 460
           F  +    N V+WT++I+G+ +    EEA++LF  MKR+ +  N  T   IL A   I  
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412

Query: 461 SLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISG 520
           S    EVHAQ+VK +++ +  +G+ L+  Y K     +A+ V   +  +D+V+W+A+++G
Sbjct: 413 S----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 472

Query: 521 CAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAIL-QGKMIHSSANKTSALS 580
            A  G    A++    + + G++PN FT+SS L  CA   A + QGK  H  A K+   S
Sbjct: 473 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 532

Query: 581 NVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQ 640
           ++ V SAL+ MYAK G +  A +VF     ++LVSW +MI  YA++G   +AL +   M+
Sbjct: 533 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 592

Query: 641 AEGFEVDDYILGTVYGAC 656
               ++D      V+ AC
Sbjct: 593 KRKVKMDGVTFIGVFAAC 606

The following BLAST results are available for this feature:

BLAST of Cmc03g0060701.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06655.1	0.0e+00	99.84	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008441245.1	0.0e+00	99.68	PREDICTED: pentatricopeptide repeat-containing protein At4g18520 [Cucumis melo]	[more]
XP_004138810.1	0.0e+00	95.03	pentatricopeptide repeat-containing protein At4g18520, chloroplastic [Cucumis sa...	[more]
KAG7015915.1	0.0e+00	83.18	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_038884364.1	0.0e+00	86.86	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like [Benin...	[more]

BLAST of Cmc03g0060701.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WNP3	1.5e-198	62.73	Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop...	[more]
P93005	3.9e-77	32.04	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]
Q9LFI1	5.7e-76	33.20	Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop...	[more]
Q9SS83	5.3e-74	33.80	Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop...	[more]
Q9ZUW3	3.4e-73	33.53	Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cmc03g0060701.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5K1	0.0e+00	99.84	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B3M7	0.0e+00	99.68	pentatricopeptide repeat-containing protein At4g18520 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LSX2	0.0e+00	95.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403710 PE=4 SV=1	[more]
A0A6J1FJ52	8.2e-304	84.43	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cuc...	[more]
A0A6J1JUB8	1.2e-302	84.11	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cuc...	[more]

BLAST of Cmc03g0060701.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18520.1	1.1e-199	62.73	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G33680.1	2.8e-78	32.04	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53360.1	4.0e-77	33.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G09040.1	3.8e-75	33.80	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G27610.1	2.4e-74	33.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 510..544 e-value: 1.9E-7 score: 28.8 coord: 180..206 e-value: 9.4E-4 score: 17.2 coord: 308..342 e-value: 5.6E-7 score: 27.3 coord: 409..442 e-value: 3.3E-7 score: 28.1 coord: 611..644 e-value: 1.6E-5 score: 22.8 coord: 208..240 e-value: 0.0015 score: 16.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 208..238 e-value: 4.4E-4 score: 20.3 coord: 611..641 e-value: 1.4E-6 score: 28.1 coord: 180..205 e-value: 0.0031 score: 17.6 coord: 583..609 e-value: 0.0096 score: 16.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 507..556 e-value: 6.1E-13 score: 48.8 coord: 406..453 e-value: 3.3E-10 score: 40.0 coord: 305..352 e-value: 2.7E-9 score: 37.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 11.279235
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 206..240 score: 9.415814
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 609..643 score: 10.566751
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 11.684803
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 508..542 score: 12.287675
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 259..360 e-value: 9.9E-16 score: 60.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 461..568 e-value: 1.8E-20 score: 75.0 coord: 361..460 e-value: 5.6E-23 score: 83.2 coord: 150..258 e-value: 2.2E-16 score: 61.7 coord: 569..672 e-value: 1.1E-18 score: 69.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR47924:SF2	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 441..656
None	No IPR available	PANTHER	PTHR47924:SF2	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 223..454
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 333..555 coord: 223..454
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 155..352
None	No IPR available	PANTHER	PTHR47924:SF2	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 333..555 coord: 155..352
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 441..656

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc03g0060701	Cmc03g0060701	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc03g0060701.1-exon	Cmc03g0060701.1-exon-CMiso1.1chr03:926889..929375	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc03g0060701.1-cds	Cmc03g0060701.1-cds-CMiso1.1chr03:926889..928910	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc03g0060701.1-three_prime_utr	Cmc03g0060701.1-three_prime_utr-CMiso1.1chr03:928911..929375	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc03g0060701.1	Cmc03g0060701.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding