Cmc01g0004901.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc01g0004901.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr01: 1270308 .. 1273017 (+)
Sequence length	2710
RNA-Seq Expression	Cmc01g0004901.1
Synteny	Cmc01g0004901.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACCATGTTTGATAACCGGTTGATTTTTAGTTTTAAGTTTTTTTTTTTGCAGAAATACCCACCAACATCGACATTTTAAACCTTCAACTAATTAACAACCAAATGCAAAATTAAACTCAAAACAGCAGCAATAACATGAATTCAGAAACTTAAAAGAGTGCAACGAACCCAAAACGAAAACTAAAACACAAAATATAGGGTCGTCGGGACTAAAAACGTCGTTTGACCTCGATTATTTTATAATAGATATAGTGAAGAAAGAAAGTAGAGATCGTCAACATTACGGTATCATATAAGATTTATTATTGCGTAGATCTCGCACATATATAAGTATAAACTTTCGATTATACATATAACTTTTTCAGTTTTCCTCGACGATTTGGTTGAAAGACACAAGATTCCAGCCAGGGGGAGTGCCACAGATTTCAATCACAACAGCATGATACTGGAGGCAACGATGCAAACAGTCTTTTGCTACTAATTCAATACTATACTCTTTCTTGCCATCAACATGAACAACAACCCAAGCTTCCAAAACGGCTTGAAACTGGAGATTGTTTCCATGTTTTTGGTTGAAGACTTTCACTGCAAACTTAGCAATTTCTATGATAGCAGGATCGTTCACACTCTTAATTTCAGTCCATTTTTTTGAAAGATCATGACTCTTGCACCCCCCCTTTCTACCCCTGATACCGATGCCTCCGCCGATCGATATATTGATGCCAGGAATACCAAGGCCGATACCGATTCCTCCACCAATACCAAGTGTCATTTTCTTGTACTGATCTTTAGTTGATATTTGATATATAGTATTGAAGATTTTGTGGTGTGTGGGTTGCCATTGCATGAGTTGATGAAGCTTTATATACAAGTGCAGTCATGGGGGGAAATAGTGTAAGTCAAAGAATAATTTTTGGTACCCTTTTGGGAAAGAATATTACATCTTTGAATGTTATTCGATTTTTTATAATATACAATGTGTTAGGGTTTATGTTGTGGGGTTTCTTTGATTTTTGTTATCTATATTTTGTATAATATTGTGGGAAATAGTATAAATGAAAGAATATCGATACTTTTGGGAAATCTTAGCTTTTGAAAGTTATTCGATTATACTTTTTAGTAACTATTTTTTTAGTTGATCGGGTTTGGCAACTACAACTAATTTCGCTTTTTGTTTCTTATTTTGTATTTTAATAATTCTCTTCCACGTCTTCACCGACGGATTTAGCATAGGCCTGGGGGACTCGAGCCCCCCTCAACTTTATTGTCTTTATATAATATGTATAAAGAAAACTACTTAATTATTAATTTTTATCATTAGCTTAGTGATTACTCTGACTATTAGCCCACTTCCCACCCACTGCACGTCTTACAATGATTTACATTTTTCTTAAATGAAATGGTTGAATTCTTAGCCAAATCCTTCGAGTTCCAAAAACTTATCAAAAAAGAAAAACATGAAAAAAAATATATTATCATCCAATTGATTATCTCTTTTAAATTTATATATATACAAGAGAAAAAATCTATACACTTTTTGGTAGTTTTCAAGAATAGGTTTAAAATGTTCCTCTTGTTAGCTACAAAGCTGACATGACAAGATGAGTCGAAAAAAAAAATATTACTTTGAACCTTTTTATTTGATCTAATTTCTCCCTCGGTTACAAGTCGGAAAAAAATATGTCTACATTTATGTACCAATGTTTTCAGAAGCTATTCTAGATTCTCAAAATTAAGAGAATAGGTCTAGCTGTCTAATAACCAATTGATTTTTAGTTTTTTTAGTTTCTATTTAATATTTTCAAATACAATTAAATTTACTTAAATACTAATTTTTGCGAAATTTATTGTTTTTAAAATTTTCTTTGCAGAAATACCCATTAACATCAACTTTTTTTAAACCTTAAGAACCAAATACAAAAACTAATTAAACTCAAAAACTCAAACACAAAACTGCAACATTAGTCTAGATCAAACTTTAAAAGTGCAACAAACCAAAAATGAAAACTAAAACACAAAATATAGGCTCAGGACTAAAAACTTAGTTCGGTCTCGATTATTTCATAATACATATAGTAGTGAAAGAAAGTAGAGATCGACATACTACAGTATCATATAAGATTTATTATTGTGTAGATCTCACACATATATATAAGTATAAACTTTTGATTATACATATATATAACTTTTCTCTTTTAGTCGAAGATTCGTTCGAAAGACACAAGAATCCAAATCTTCTTATGATCAACGGTTTTTTCAATCACGACAGCATGAAACTCGAGGAGACGATGCAAACAGTCTTTTGCTACTAATTCAATACTATACTCTTTTTCGTTATTAACTTCATGAACCCAAGCTTCCGTAACGTATTGAAACTCAAGATTATTTTCATATTTTTTGTTGAACGCATCCACTGCAAACTTAGCAGCTTCTAAAACATCAGGAGCCTTCACATTGTGAAGTTGAATCCATTTTTTCGAAGGATTGTGACTCTTGCACCCACCCTTTCTACCTCCGATACCAATGCCTCCGCCGATCGATATATTGAAGCCAGGAAGACCAAAGCCAATACCAATTCTTCCACCAATACCAAGTGTCATTTTCTTGTGATCTTTAGTTGATATTTGATGGTATTGAAAATTTTGTGGTGTGTGTTGCCATTGCATGGAGTTGTTGAAGCTTTATACAAGTGTGTATTCATGGGGGGA

mRNA sequence

TATACCATGTTTGATAACCGGTTGATTTTTAGTTTTAAGTTTTTTTTTTTGCAGAAATACCCACCAACATCGACATTTTAAACCTTCAACTAATTAACAACCAAATGCAAAATTAAACTCAAAACAGCAGCAATAACATGAATTCAGAAACTTAAAAGAGTGCAACGAACCCAAAACGAAAACTAAAACACAAAATATAGGGTCGTCGGGACTAAAAACGTCGTTTGACCTCGATTATTTTATAATAGATATAGTGAAGAAAGAAAGTAGAGATCGTCAACATTACGGTATCATATAAGATTTATTATTGCGTAGATCTCGCACATATATAAGTATAAACTTTCGATTATACATATAACTTTTTCAGTTTTCCTCGACGATTTGGTTGAAAGACACAAGATTCCAGCCAGGGGGAGTGCCACAGATTTCAATCACAACAGCATGATACTGGAGGCAACGATGCAAACAGTCTTTTGCTACTAATTCAATACTATACTCTTTCTTGCCATCAACATGAACAACAACCCAAGCTTCCAAAACGGCTTGAAACTGGAGATTGTTTCCATGTTTTTGGTTGAAGACTTTCACTGCAAACTTAGCAATTTCTATGATAGCAGGATCGTTCACACTCTTAATTTCAGTCCATTTTTTTGAAAGATCATGACTCTTGCACCCCCCCTTTCTACCCCTGATACCGATGCCTCCGCCGATCGATATATTGATGCCAGGAATACCAAGGCCGATACCGATTCCTCCACCAATACCAAGTGTCATTTTCTTGTACTGATCTTTAGTTGATATTTGATATATAGTATTGAAGATTTTGTGGTGTGTGGGTTGCCATTGCATGAGTTGATGAAGCTTTATATACAAGTGCAGTCATGGGGGGAAATAGTGTAAGTCAAAGAATAATTTTTGGTACCCTTTTGGGAAAGAATATTACATCTTTGAATGTTATTCGATTTTTTATAATATACAATGTGTTAGGGTTTATGTTGTGGGGTTTCTTTGATTTTTGTTATCTATATTTTGTATAATATTGTGGGAAATAGTATAAATGAAAGAATATCGATACTTTTGGGAAATCTTAGCTTTTGAAAGTTATTCGATTATACTTTTTAGTAACTATTTTTTTAGTTGATCGGGTTTGGCAACTACAACTAATTTCGCTTTTTGTTTCTTATTTTGTATTTTAATAATTCTCTTCCACGTCTTCACCGACGGATTTAGCATAGGCCTGGGGGACTCGAGCCCCCCTCAACTTTATTGTCTTTATATAATATGTATAAAGAAAACTACTTAATTATTAATTTTTATCATTAGCTTAGTGATTACTCTGACTATTAGCCCACTTCCCACCCACTGCACGTCTTACAATGATTTACATTTTTCTTAAATGAAATGGTTGAATTCTTAGCCAAATCCTTCGAGTTCCAAAAACTTATCAAAAAAGAAAAACATGAAAAAAAATATATTATCATCCAATTGATTATCTCTTTTAAATTTATATATATACAAGAGAAAAAATCTATACACTTTTTGGTAGTTTTCAAGAATAGGTTTAAAATGTTCCTCTTGTTAGCTACAAAGCTGACATGACAAGATGAGTCGAAAAAAAAAATATTACTTTGAACCTTTTTATTTGATCTAATTTCTCCCTCGGTTACAAGTCGGAAAAAAATATGTCTACATTTATGTACCAATGTTTTCAGAAGCTATTCTAGATTCTCAAAATTAAGAGAATAGGTCTAGCTGTCTAATAACCAATTGATTTTTAGTTTTTTTAGTTTCTATTTAATATTTTCAAATACAATTAAATTTACTTAAATACTAATTTTTGCGAAATTTATTGTTTTTAAAATTTTCTTTGCAGAAATACCCATTAACATCAACTTTTTTTAAACCTTAAGAACCAAATACAAAAACTAATTAAACTCAAAAACTCAAACACAAAACTGCAACATTAGTCTAGATCAAACTTTAAAAGTGCAACAAACCAAAAATGAAAACTAAAACACAAAATATAGGCTCAGGACTAAAAACTTAGTTCGGTCTCGATTATTTCATAATACATATAGTAGTGAAAGAAAGTAGAGATCGACATACTACAGTATCATATAAGATTTATTATTGTGTAGATCTCACACATATATATAAGTATAAACTTTTGATTATACATATATATAACTTTTCTCTTTTAGTCGAAGATTCGTTCGAAAGACACAAGAATCCAAATCTTCTTATGATCAACGGTTTTTTCAATCACGACAGCATGAAACTCGAGGAGACGATGCAAACAGTCTTTTGCTACTAATTCAATACTATACTCTTTTTCGTTATTAACTTCATGAACCCAAGCTTCCGTAACGTATTGAAACTCAAGATTATTTTCATATTTTTTGTTGAACGCATCCACTGCAAACTTAGCAGCTTCTAAAACATCAGGAGCCTTCACATTGTGAAGTTGAATCCATTTTTTCGAAGGATTGTGACTCTTGCACCCACCCTTTCTACCTCCGATACCAATGCCTCCGCCGATCGATATATTGAAGCCAGGAAGACCAAAGCCAATACCAATTCTTCCACCAATACCAAGTGTCATTTTCTTGTGATCTTTAGTTGATATTTGATGGTATTGAAAATTTTGTGGTGTGTGTTGCCATTGCATGGAGTTGTTGAAGCTTTATACAAGTGTGTATTCATGGGGGGA

Coding sequence (CDS)

ATGGTTGAATTCTTAGCCAAATCCTTCGAGTTCCAAAAACTTATCAAAAAAGAAAAACATGAAAAAAAATATATTATCATCCAATTGATTATCTCTTTTAAATTTATATATATACAAGAGAAAAAATCTATACACTTTTTGGTAGTTTTCAAGAATAGGTTTAAAATGTTCCTCTTGTTAGCTACAAAGCTGACATGA

Protein sequence

MVEFLAKSFEFQKLIKKEKHEKKYIIIQLIISFKFIYIQEKKSIHFLVVFKNRFKMFLLLATKLT

Homology

The following BLAST results are available for this feature:

BLAST of Cmc01g0004901.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0004901.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0004901.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0004901.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc01g0004901	Cmc01g0004901	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004901.1-exon	Cmc01g0004901.1-exon-CMiso1.1chr01:1270308..1273017	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004901.1-five_prime_utr	Cmc01g0004901.1-five_prime_utr-CMiso1.1chr01:1270308..1271708	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004901.1-cds	Cmc01g0004901.1-cds-CMiso1.1chr01:1271709..1271906	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004901.1-three_prime_utr	Cmc01g0004901.1-three_prime_utr-CMiso1.1chr01:1271907..1273017	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004901.1	Cmc01g0004901.1-protein	polypeptide