Cmc01g0004411.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc01g0004411.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	pathogenesis-related protein 1-like
Location	CMiso1.1chr01: 1031155 .. 1031649 (-)
Sequence length	495
RNA-Seq Expression	Cmc01g0004411.1
Synteny	Cmc01g0004411.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTCTCAAGCTCTCCCTCTCCCTCTCCCTCTTTTGTGTCCTGACCTTTATCATGCTTCCATCTTCTCTTGCTCAAGACTCACCTCGAGACTTCGTCAATGCCCACAACGCAGCTCGTGCCCAAGTCGGGGTTGGGCCGGTTCACTGGGACGAAAGAGTAGCGAGTTTTGCTCGACAATATGCGAACCAACGCATCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTCAAATGTGGGTGAATGAGAAGCAGTTCTACAATTATGGCTCCAATACATGTGCGGCTGGTAAGGTGTGTGGTCACTACACTCAAGTTGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAATAATCGTGGCACGTTTATCATTTGCAACTATGAACCCCGTGGGAATATCATAGGCCAAAAGCCATATTGA

mRNA sequence

ATGGATGTTCTCAAGCTCTCCCTCTCCCTCTCCCTCTTTTGTGTCCTGACCTTTATCATGCTTCCATCTTCTCTTGCTCAAGACTCACCTCGAGACTTCGTCAATGCCCACAACGCAGCTCGTGCCCAAGTCGGGGTTGGGCCGGTTCACTGGGACGAAAGAGTAGCGAGTTTTGCTCGACAATATGCGAACCAACGCATCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTCAAATGTGGGTGAATGAGAAGCAGTTCTACAATTATGGCTCCAATACATGTGCGGCTGGTAAGGTGTGTGGTCACTACACTCAAGTTGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAATAATCGTGGCACGTTTATCATTTGCAACTATGAACCCCGTGGGAATATCATAGGCCAAAAGCCATATTGA

Coding sequence (CDS)

ATGGATGTTCTCAAGCTCTCCCTCTCCCTCTCCCTCTTTTGTGTCCTGACCTTTATCATGCTTCCATCTTCTCTTGCTCAAGACTCACCTCGAGACTTCGTCAATGCCCACAACGCAGCTCGTGCCCAAGTCGGGGTTGGGCCGGTTCACTGGGACGAAAGAGTAGCGAGTTTTGCTCGACAATATGCGAACCAACGCATCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTCAAATGTGGGTGAATGAGAAGCAGTTCTACAATTATGGCTCCAATACATGTGCGGCTGGTAAGGTGTGTGGTCACTACACTCAAGTTGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAATAATCGTGGCACGTTTATCATTTGCAACTATGAACCCCGTGGGAATATCATAGGCCAAAAGCCATATTGA

Protein sequence

MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY

Homology

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BLAST of Cmc01g0004411.1 vs. NCBI nr
Match: XP_008455064.1 (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa] >TYK06836.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 1.7e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. NCBI nr
Match: XP_038887491.1 (pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 4.3e-83
Identity = 147/164 (89.63%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+LK  LSLSLFCVL+F MLPSSLAQDSP+D++NAHNAARAQVGVGPV WDERVASFAR
Sbjct: 1   MDLLK--LSLSLFCVLSFTMLPSSLAQDSPQDYLNAHNAARAQVGVGPVQWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDC+L+HSGGPYGENIAWG PDLSGTAAVQMWVNEKQFYNYG+NTCAAGKVCG
Sbjct: 61  QYANQRINDCKLIHSGGPYGENIAWGWPDLSGTAAVQMWVNEKQFYNYGTNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWR SVRIGCAKV+CTNN GTFIICNY+PRGNIIGQKPY
Sbjct: 121 HYTQVVWRKSVRIGCAKVKCTNNGGTFIICNYDPRGNIIGQKPY 162

[Close]

BLAST of Cmc01g0004411.1 vs. NCBI nr
Match: XP_011658861.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78
Identity = 140/164 (85.37%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTF MLPSSLAQDSP+DF++AHN ARAQ GV PV WDE VASFA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDC LVHSGGPYGENIAWGMPDLSGTAAV+MWVNEK+FY+YGSNTCAA +VCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKV CTNN GTFI CNY+P GN +GQ+PY
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. NCBI nr
Match: XP_022952868.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 140/164 (85.37%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+ KLSLS+  + VL+F M  SSLAQDSP+DFVNAHNAARAQVGVGPV WDERVASFAR
Sbjct: 1   MDLFKLSLSI-FYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAG+VCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNY+PRGNIIGQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 163

[Close]

BLAST of Cmc01g0004411.1 vs. NCBI nr
Match: XP_023553946.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77
Identity = 141/164 (85.98%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+ KLSLSL  +  L+F M  SSLAQDSP+DFVNAHNAARAQVGVGPV WDERVASFAR
Sbjct: 1   MDLFKLSLSL-FYVGLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNY+PRGNIIGQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 163

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-57
Identity = 106/166 (63.86%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M   KL++ L+L   +   M+  S AQ+SP+D+V+ HNAAR+ VGVG V W  ++ +FA+
Sbjct: 1   MQTPKLAILLAL--AMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQ 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGM--PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKV 120
            YANQRINDC+L HSGGPYGENI WG    D     AV  WVNEK+ YNYGSNTCAAGKV
Sbjct: 61  NYANQRINDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKV 120

Query: 121 CGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           CGHYTQVVWR S  IGCA+V C NNRG FI CNYEPRGNI+GQKPY
Sbjct: 121 CGHYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-56
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M   KL + L+L   ++  M+  S AQ+SP+D+V+ HNAARA VGVG V W  ++ +FA+
Sbjct: 1   MQTPKLVILLAL--AMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQ 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGM--PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKV 120
            YANQRINDC+L HSGGPYGENI WG    D   + AV  WV+EK+ Y+YGSNTCAAGKV
Sbjct: 61  NYANQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKV 120

Query: 121 CGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           CGHYTQVVWR S  IGCA+V C NNRG FI CNYEPRGNI+GQKPY
Sbjct: 121 CGHYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-56
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M   KL++ L+L   +   M+  S AQ+SP+D+V+ HNAAR+ VGVG V W  ++ +FA+
Sbjct: 1   MQTPKLAILLAL--AMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQ 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGM--PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKV 120
            YANQRINDC+L HSGGPYGENI WG    D   + AV  WV+EK+ Y+YGSNTCAAGKV
Sbjct: 61  NYANQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKV 120

Query: 121 CGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           CGHYTQVVWR S  IGCA+V C NNRG FI CNYEPRGNIIGQKPY
Sbjct: 121 CGHYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-54
Identity = 100/164 (60.98%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M+    S  L +F  L   ++  S AQDSP+D++  HN AR  VGVGP+ WDERVA++AR
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
            YA Q   +CRL+HSGGPYGEN+AWG  DLSG +AV MWV+EK  YNY +NTC    VCG
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWR SVR+GCAKVRC NN GT I CNY+PRGN + +KPY
Sbjct: 121 HYTQVVWRKSVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.5e-54
Identity = 102/158 (64.56%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 9   SLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRIN 68
           S++L CV+  +M+  S+AQ+SP+D+V+AHNAAR+ V VGPV WDE VA+FARQYA  R  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 69  DCRLVHSGGP-YGENIAWGMP-DLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVV 128
           DCRLVHSG P YGEN+A+G   +L+G  AV MWV E+  YN  +NTCA GKVCGHYTQVV
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 129 WRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           WRNSVRIGCA+VRC NN   FI CNY P GN  GQ+PY
Sbjct: 131 WRNSVRIGCARVRC-NNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy TrEMBL
Match: A0A5A7SJR7 (Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001400 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 8.4e-93
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy TrEMBL
Match: A0A1S3C0R9 (pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 8.4e-93
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy TrEMBL
Match: A0A0A0K6A4 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070253 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.9e-79
Identity = 140/164 (85.37%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTF MLPSSLAQDSP+DF++AHN ARAQ GV PV WDE VASFA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDC LVHSGGPYGENIAWGMPDLSGTAAV+MWVNEK+FY+YGSNTCAA +VCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKV CTNN GTFI CNY+P GN +GQ+PY
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy TrEMBL
Match: A0A6J1GLT8 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455432 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.6e-78
Identity = 140/164 (85.37%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+ KLSLS+  + VL+F M  SSLAQDSP+DFVNAHNAARAQVGVGPV WDERVASFAR
Sbjct: 1   MDLFKLSLSI-FYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAG+VCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNY+PRGNIIGQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 163

[Close]

BLAST of Cmc01g0004411.1 vs. ExPASy TrEMBL
Match: A0A6J1I658 (pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC111471050 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 137/164 (83.54%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+ KLSLSL  + VL+F M  SSLAQDSP+DFVNAHNAARAQVGVGP+ WDERVASFAR
Sbjct: 1   MDLFKLSLSL-FYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFI CNY+P GN++GQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNVVGQRPF 163

[Close]

BLAST of Cmc01g0004411.1 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55
Identity = 100/164 (60.98%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M+    S  L +F  L   ++  S AQDSP+D++  HN AR  VGVGP+ WDERVA++AR
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
            YA Q   +CRL+HSGGPYGEN+AWG  DLSG +AV MWV+EK  YNY +NTC    VCG
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWR SVR+GCAKVRC NN GT I CNY+PRGN + +KPY
Sbjct: 121 HYTQVVWRKSVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cmc01g0004411.1 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 9.9e-54
Identity = 96/158 (60.76%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 9   SLSLFCVLTF--IMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQR 68
           S +LF  +TF  +++    AQDSP+DF+  HN ARA+VGVGP+ WDE+VA++AR YANQR
Sbjct: 7   SQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQR 66

Query: 69  INDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVV 128
             DC + HS G YGENIAW    ++G AAV MWV+E+  Y+Y SNTCA  K CGHYTQVV
Sbjct: 67  KGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVV 126

Query: 129 WRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           WRNS R+GCAKVRC NN  TFI CNY+P GN +G+ PY
Sbjct: 127 WRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cmc01g0004411.1 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-53
Identity = 101/164 (61.59%), Postives = 117/164 (71.34%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M V   S  L +   L   ++    AQDS +D+VNAHN AR+Q+GVGP+ WDE +A++AR
Sbjct: 1   MKVTSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
            YANQ   DCRLVHS GPYGEN+A    DLSG AAV +WVNEK  YNY +NTC    VCG
Sbjct: 61  NYANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVR+GCAKVRC NN GT I CNY+P GN   QKPY
Sbjct: 121 HYTQVVWRNSVRLGCAKVRC-NNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cmc01g0004411.1 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 9.6e-49
Identity = 87/159 (54.72%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 8   LSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRI 67
           L  ++  +L   +   SLA+D  + F+ AHN AR +VG+ P+ WD+ VA++A  YANQRI
Sbjct: 4   LKTNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRI 63

Query: 68  NDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTC--AAGKVCGHYTQV 127
           NDC LVHS GP+GENIA    ++S   A +MW+NEKQ+Y+Y SNTC    G  C HYTQV
Sbjct: 64  NDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQV 123

Query: 128 VWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           VW+N+VR+GCAKV C N+ GTFI CNY+P GN IG+KP+
Sbjct: 124 VWKNTVRLGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cmc01g0004411.1 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 176.0 bits (445), Expect = 2.4e-44
Identity = 72/135 (53.33%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 30  PRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWGMPD 89
           P++ +  HN ARA VGVGP+ W+E +A++A+ YA++R  DC + HS GP+GEN+A G   
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 90  LSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGTFII 149
           +SG  A + W+ EK+ Y+Y SNTC    VCGHYTQ+VWR+SVR+GCA VRC N+   ++I
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVI 161

Query: 150 CNYEPRGNIIGQKPY 165
           C+Y+P GN IGQ+PY
Sbjct: 162 CSYDPPGNYIGQRPY 176

The following BLAST results are available for this feature:

BLAST of Cmc01g0004411.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455064.1	1.7e-92	100.00	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1...	[more]
XP_038887491.1	4.3e-83	89.63	pathogenesis-related protein 1-like [Benincasa hispida]	[more]
XP_011658861.1	1.4e-78	85.37	basic form of pathogenesis-related protein 1 [Cucumis sativus]	[more]
XP_022952868.1	1.6e-77	85.37	pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023553946.1	2.7e-77	85.98	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc01g0004411.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35792	1.9e-57	63.86	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35793	1.6e-56	63.25	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q05968	1.6e-56	63.25	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P33154	1.5e-54	60.98	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q41359	2.5e-54	64.56	Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1	[more]

BLAST of Cmc01g0004411.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJR7	8.4e-93	100.00	Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C0R9	8.4e-93	100.00	pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329...	[more]
A0A0A0K6A4	6.9e-79	85.37	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070253 PE=4 SV...	[more]
A0A6J1GLT8	7.6e-78	85.37	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145543...	[more]
A0A6J1I658	1.1e-76	83.54	pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cmc01g0004411.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14610.1	1.1e-55	60.98	pathogenesis-related gene 1	[more]
AT4G33720.1	9.9e-54	60.76	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	1.7e-53	61.59	basic pathogenesis-related protein 1	[more]
AT3G19690.1	9.6e-49	54.72	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	2.4e-44	53.33	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 95..108 score: 44.51 coord: 49..67 score: 35.68 coord: 119..135 score: 66.19 coord: 147..160 score: 50.53
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 21..164
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 28..160 e-value: 1.7E-64 score: 230.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 34..152 e-value: 1.3E-22 score: 80.9
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 28..164 e-value: 3.3E-46 score: 159.0
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 13..164
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 21..164
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 30..164 e-value: 1.90989E-91 score: 260.259
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 147..158
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 120..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc01g0004411	Cmc01g0004411	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004411.1-exon	Cmc01g0004411.1-exon-CMiso1.1chr01:1031155..1031649	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004411.1-cds	Cmc01g0004411.1-cds-CMiso1.1chr01:1031155..1031649	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004411.1	Cmc01g0004411.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005615	extracellular space