Cmc01g0003831.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc01g0003831.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr01: 687323 .. 688987 (+)
Sequence length	1665
RNA-Seq Expression	Cmc01g0003831.1
Synteny	Cmc01g0003831.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATTTATAAAAAGATAGAGTATGATATTCTTTATTATTATAAAAGACGATGTAGTTAATTAGAACATGTTAATTATTCATACTACCCTTTGAATTATCTAATATTAAGGTCATCCCTACAATAATATTTGCACACAATAAATTACTAAGTCATAACCCTCATTCAACTCTATGATTATTTAATTTATATCTATATGGTTGTGTTGGGGAAAAAAGCACAAAATTTTCATCTTCAACTCTTTGCTTTTCTTTCCTTGCGTCAAAGAAATAACTCAAAATGAAAGAGAGAGAGAGAGATGATGATGTAATTAACATAAGAAAAGTGAGTTTAGTCCTAAAATAAATAACCCAACTACTCATATTCTATATTTCCTTTACATCCATTGACTAATTAAATTGTTCCCTCAATTCTAACCATATTCTGTATAACATTATTATTTCGCAAATAAGTCTTCATGTATAGTTTCACATCCAAATATTATTCAGCCTTTGTTCATGTGCTCCCTTCCTTTCTCTAATTTTTCAACTTTTCTTTATTTTCAAACCAAAACTATCAAATTGAATTTGAGAAAAAAACCACCACAGTGTTTATTTAATTTTCATCTCATTTCACCTCGAAATAATTAACAAAGCAACTTCTTAAAAAGTTTTAAATCGACTCCTAACTCATGCCAACATCGCAATTGACATTAACTTTTATTGTCAACCAACTCCTTGAACCGATCAAAACTTGGACCTCCAAGCCACCAAACCAATACGAAATCTTTTAAAGGCATTTTTCTAAGATCTTATATCAATGGTAGGAAAAAGAAAAAAAAAATTAAACCCTTCCCCACTTCTAACCAAATTGATGTGAAATTATATGTTCACATTTCCAACACCAAAAGAATCAACTTTTTCATCCTTCCCATTGTCAAACCTCAAGAATTTGAAGCTTTTTCAAACCCTAATTTTCAAAACCTCAAATAACAATAAATAATATATATATGAGATAACAAAAGTTGTGTCCTCCGCCAACTTCGGCTCACCTACGCTCCAAAGTCAAAACACCAAACCTTACCCTTTTCTTTTACTTTTTCTTATATAAACACTCATTTCCTTTTCCTCATTTTACCAAACTTATTTACAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTCTTAAAATTAATATAATGAACTCTAAATCTCTCCTTCTGGGTCTCAATCTCACTGCCATTTTCATCTTCTTCCTCTTGCTTTCCTCCATTCAAGTCCACTCTTCAAGGCCTCTTAAACATCATCATCCTTCTTCTTTGGGAGTTTCTCCGGTCACAAAACTTCACGTATACAAAGATTATTCGGGCCCGAGCCATAGAGGCTCTGGCCATTGAATGACTCGCCGAAATCAAGGATATGAAGATTGCTTGTCTTCTTCACTTTTAAGCAAACTCTTCGTTTTGTAATATTTTTGTTTGTTTTGTTAGAGAAATGATAAATGTGTTGTGTATAGATACAATATTTCATTTGGACTCCTAGCTTTTTCATTTTTTGTTCATTTGTTAGATTGTATACTTAGATTATTCAAGTGTAATTTATTGCCAAGGATATATATTGATATATTTCTATATTGAAGAATCGGAAAAACGATGTATTTGATCTATTATTTTGTAGG

mRNA sequence

GCATTTATAAAAAGATAGAGTATGATATTCTTTATTATTATAAAAGACGATGTAGTTAATTAGAACATGTTAATTATTCATACTACCCTTTGAATTATCTAATATTAAGGTCATCCCTACAATAATATTTGCACACAATAAATTACTAAGTCATAACCCTCATTCAACTCTATGATTATTTAATTTATATCTATATGGTTGTGTTGGGGAAAAAAGCACAAAATTTTCATCTTCAACTCTTTGCTTTTCTTTCCTTGCGTCAAAGAAATAACTCAAAATGAAAGAGAGAGAGAGAGATGATGATGTAATTAACATAAGAAAAGTGAGTTTAGTCCTAAAATAAATAACCCAACTACTCATATTCTATATTTCCTTTACATCCATTGACTAATTAAATTGTTCCCTCAATTCTAACCATATTCTGTATAACATTATTATTTCGCAAATAAGTCTTCATGTATAGTTTCACATCCAAATATTATTCAGCCTTTGTTCATGTGCTCCCTTCCTTTCTCTAATTTTTCAACTTTTCTTTATTTTCAAACCAAAACTATCAAATTGAATTTGAGAAAAAAACCACCACAGTGTTTATTTAATTTTCATCTCATTTCACCTCGAAATAATTAACAAAGCAACTTCTTAAAAAGTTTTAAATCGACTCCTAACTCATGCCAACATCGCAATTGACATTAACTTTTATTGTCAACCAACTCCTTGAACCGATCAAAACTTGGACCTCCAAGCCACCAAACCAATACGAAATCTTTTAAAGGCATTTTTCTAAGATCTTATATCAATGGTAGGAAAAAGAAAAAAAAAATTAAACCCTTCCCCACTTCTAACCAAATTGATGTGAAATTATATGTTCACATTTCCAACACCAAAAGAATCAACTTTTTCATCCTTCCCATTGTCAAACCTCAAGAATTTGAAGCTTTTTCAAACCCTAATTTTCAAAACCTCAAATAACAATAAATAATATATATATGAGATAACAAAAGTTGTGTCCTCCGCCAACTTCGGCTCACCTACGCTCCAAAGTCAAAACACCAAACCTTACCCTTTTCTTTTACTTTTTCTTATATAAACACTCATTTCCTTTTCCTCATTTTACCAAACTTATTTACAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTCTTAAAATTAATATAATGAACTCTAAATCTCTCCTTCTGGGTCTCAATCTCACTGCCATTTTCATCTTCTTCCTCTTGCTTTCCTCCATTCAAGTCCACTCTTCAAGGCCTCTTAAACATCATCATCCTTCTTCTTTGGGAGTTTCTCCGGTCACAAAACTTCACGTATACAAAGATTATTCGGGCCCGAGCCATAGAGGCTCTGGCCATTGAATGACTCGCCGAAATCAAGGATATGAAGATTGCTTGTCTTCTTCACTTTTAAGCAAACTCTTCGTTTTGTAATATTTTTGTTTGTTTTGTTAGAGAAATGATAAATGTGTTGTGTATAGATACAATATTTCATTTGGACTCCTAGCTTTTTCATTTTTTGTTCATTTGTTAGATTGTATACTTAGATTATTCAAGTGTAATTTATTGCCAAGGATATATATTGATATATTTCTATATTGAAGAATCGGAAAAACGATGTATTTGATCTATTATTTTGTAGG

Coding sequence (CDS)

ATGAACTCTAAATCTCTCCTTCTGGGTCTCAATCTCACTGCCATTTTCATCTTCTTCCTCTTGCTTTCCTCCATTCAAGTCCACTCTTCAAGGCCTCTTAAACATCATCATCCTTCTTCTTTGGGAGTTTCTCCGGTCACAAAACTTCACGTATACAAAGATTATTCGGGCCCGAGCCATAGAGGCTCTGGCCATTGA

Protein sequence

MNSKSLLLGLNLTAIFIFFLLLSSIQVHSSRPLKHHHPSSLGVSPVTKLHVYKDYSGPSHRGSGH

Homology

The following BLAST results are available for this feature:

BLAST of Cmc01g0003831.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0003831.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0003831.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0003831.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc01g0003831	Cmc01g0003831	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0003831.1-exon	Cmc01g0003831.1-exon-CMiso1.1chr01:687323..688987	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0003831.1-five_prime_utr	Cmc01g0003831.1-five_prime_utr-CMiso1.1chr01:687323..688508	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0003831.1-cds	Cmc01g0003831.1-cds-CMiso1.1chr01:688509..688706	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0003831.1-three_prime_utr	Cmc01g0003831.1-three_prime_utr-CMiso1.1chr01:688707..688987	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc01g0003831.1	Cmc01g0003831.1-protein	polypeptide