CmaCh19G006970.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G006970.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	epimerase family protein SDR39U1 homolog, chloroplastic-like
Location	Cma_Chr19: 7165039 .. 7170635 (+)
Sequence length	1616
RNA-Seq Expression	CmaCh19G006970.1
Synteny	CmaCh19G006970.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATTTGCATATTTGTCGTAGTTTGAAGGGTTATCCTGATGTCGAGATTTTGAACCTCGTTCACCCCAAAGTATTTTTTTCTCCCTGACCCATTACCGATTCTCTCTTTCTTAATTAATGATCTTTCATTCCCGTCCACTCCAGTTGAGCTTCCTCGGAGAACCATTTGTTTCAATCAGCCTTACCGAGCTTAATTTTGTGATGGAAATTGCTTCTTGCCGCCCGGACCATCAAACCCGTCCTATCCTAATCTAGATCTCCTCATTTTCCCGTCTTTCCTTCTTACTGTGCTGCCGACAGAGCTCCGAGCCCACCCGCCATTATTTCCTGAATGGAGATCCCTGGCGCCATTTCCTTCTCATGGAGTCGTACTGTCTCCCATTCTATTCGCATCCCTCAACATGTGGCAGTAAGTGTCTGGTTCTCATAATCTCATTTTATTAGCTTTTCGGGGGCATTGATTGAGTGAATGATTAACCAAGGCCCCCTCTCTCTGTTTTTCTTCGTTTAAATGCTCTTTTTTTCTTGAAGATATGTGGCAAGAGGTTCAGGGTTTTCTGCGCCATTGATTCAACAGAGATGGTATGTACTTGAATTTCAATGTTTTACGTTTACACGGCCGATAGCTGTTTTTTGTATTTCAGACTTGGAATTGAGAATTGTAATATGTGTTAATTTAAAGTCAATTTGTTCTTGATTGCGTTTCCTATGTTTGATAATTGACTCCCAACATTTCTGTAGCTGTGAAGTCATATTATTGTTATTGATCTTTCAAAATCATTGATACTTCAAGGTTGACGTTGGGGGGCTCGGCATAGTTAATTTGAAACTTCCTAGTGAGGCTTTGCTGGCTAAAATAGTTCTGGCATTTCCCATTGGAGTCGAAGGTTCTATGGCACAGGGTCAATGGGAGAAAATATAGTCCTCACCCTCTCTTGTGATCCTCGGTCTGTAAGCTCTGTGAGCTCGATACTTTCAAGAAATATCGGATAGCTATCTCCCTTTTGTACTTTGTTTCCTTGCTTAGACCACCTTTCCTCCTTGGGGGTTGTATCCAATGGCTAACTCTCTTGATTTTGGTTTCGGCTATCCTCTTTCAGATAGGGAACCATTTGACGTGTCTTCTCTTCTTTCTTCATTGGGAAACGTCCATCTTCATTCGGGTAGTAGGAATATTATTTTTTGGTCCCCTAATCCCTCCAAGGGGCTCCCTTGCTGTTCATTTTTCCTCATTTTGAGTAGCCCTCGCGCTTCTAGGAACTCGAGGAAGGTTCACCTTCTCAAGAAGATCGAATTCTTTACCTGGCAAGCCTTACATGGGAGAGTGAACACAATGGGTTGCATTCAAAAACACTCTTCCTTCTTGTTGGGGCCGCAGTGGTGCTTTCATAGTAGCAAGGCGTCTGAAAATCTGGATCACATCATGCGGAAATCCCAGTTCGCACTTCCATCATGGGACTGTTTTTTGGAGACTTTTGGTGTTCACTTAGCTCGTTATAGAGATCGTTCTCTCATGTTGGGGGAGGTTTTGTTTCATCCGCCCTTTTGTGAATATGGTCTTGTTCATTGGCAATTTGCATGCTAGCTGTTTTCTTTCTTTTTCTTTTTCCTGTCTTGTTAGCTCTGTGGTTCGTTAGGTTCTTTGTGAGATGTTTTTGTAAGCCGTTTTGAGCTCTTTCATTTTTCTCAGCTCGATTTCTTGATTAAAAAGAACTTTCTTGCAGAAAAATCAGTTCACTGTATCAATAACTGGAGCTACAGGCTTTATCGGTCGAAGACTTGTGCAAAGGCTACATACAGGTTATATTCAATACATCAACCTAGGCATAAAAGCTTACCAAAAAATTTCACAAATCATATCTTTAACCTTTTACTCCAATCTACTTCTCACAATATAGTGGATGAACAACTGATTGAGAATTCTTTGTTGTGTTGCTGGTTATAGATAACCATAACATTCGAGTTTTGACACGCTCTAAATCTAAAGCCGAGTTGATTTTTCCGGGTAAGAAGGTAACTCATGTCAATAGTCATTCATTTTTTACTGTACCTTTTGACTTGTCTTCTCTCTAACTTTTGAACATTATCCCAAAACTTGTAGCTAGGGAGTTTCCAGGAATTGTGATCGCAGAGGAGCCAGGGTGGAAAGACTATCCCAAAACTTGTAGCTAGGGAGTTTCCAGGAATTGTGATCGCAGAGGAGCCAGGGTGGAAAGACTGCATCCAAGGTTCAGATGGCGTTGTTAACTTGGCTGGGTTGCCTATAAGTACCAGGTGGTCTCCTGAGGTTAGTACATATTTCCAATGGATTTTGACCCCCTATAACGTGGTTTATGGCTTCATTTTCTGTACAACAAGCTAATAATAAGCTGTTCGAATAGGGTACTAATTACTCTACTCGAATAGTACTTATAATCAATCTTGGCTAATAATAAGCTGTTCGAATAGGGTACTAATTACTCTACTCGAATAGTACTTATAATCAATCTTGGAATGGAGCTTAACATTTGGAATCTTTTAAGGTGGCACTAGATATGTCCATAACTGGAGATACGTCAGTTTTAGATAAATACTCATACTCTTTATTAAGACCAATCGAGAAGAGATTACAAGACACTCTATAAAAATTACTGCACTCTATGCTACTCTTTATTAAGACCAATCGAGAAGAGATTACAAGACACTCTATAAAAATTACTGCACTCTATGCTTTGTATTTCTTGGGGATGAAAATATTGGTAGAGTGAAGGGGTATTTATAACAGAGGCTAGACAATTTATTGCTAAAATACCTATATCGTTTTCCTAAAATATATAGACAATGGGCTCATAAGATTATTCGACTTGATCTTATTGAACTTGTGATGATATTTTAACTTTTTGATTCATGCTATGCTTTAGATCAGTTCATCCAACTGTTTGTGGCAGTATGATGAAACAACTATTATTATCTCTTACTCTACTTGTTTCAATTTTACAATCTGAGGACTTATTTTTTCAAAGATTAATAATATAGATCAAGAAAGAGATCAAGCAAAGCAGGATCAGAGTCACCTCAAAGGTAAAAACTTGTCCCGCTAACTATAGAGTTTTTGCAAACAGTTTAAGAGACTTCTTCCCTTTCTAGCTTTTACAGAAGCCCCGCTAACTATAGAGTTTTTGCAAACAGTTTAAGAGACTTCTTCCCTTTCTAGCTTTTACAGAAGCCAAATCTGATATATACCAATATTTAATACTTAACTAATGTGAAGGTTGTGAGCTTAATTAATGATGCCCCCGACGTAGCTCGCCCGACAGTTTTGGTTAGCGCAACAGCTATTGGTTACTATGGTATGTGTTATATATCTGAAAGAACATATGTCAATATTCAAAGAAAAAATTATCAACGATTGAGTAGAGTTCAATCGAACTGTTGTGAATTTTCATCCTTTTCCTTATAGGCTGCCAATTTTCTCAGTTTCAACGTGAGAATGCCTATTTTCTCAGTTTCAACGTGAGAATTATGAAGCTCATATTCATAATCATAATTATACTTGAACTATTCTATATCTCTCAGGCACTAGTGAAACAGCAATATTTGACGAACGAAGTCCATCCGGAAATGACTACTTGGCCGAGGTGAGAAAAGTTGTTAGATTGAGGTAATTGAAGAGGAATTGTTGGATTTTTTAATTTTTTTCTTTGAAATCGAACAGGAAAATAATTAAATTGCGATAGAGCTAGTACAACTTAAAACTTAAGATTGTTTGAAATGACTTCCTAAGTATTTGAAAACACTTCTTTGCACTTAAAAAAGTCGTTCTAAACAAACTCTTAATCCTCCTCTAATTCACTCAATGATTGTCTAGTGTGAAGCAGTTTGTTGACGAGCATTAAGATTTCGTAATCGTCATATATTGAAAATTTTCATACAATCCTAAGCTCGTGTAATATTTTGTGAACTTTCATTTCTGTTGTTTGATGACTGATTTTCCAGGTTTGTAGGGAATGGGAAGCAACAGCCCTGGGAGCAAACAAGAACGTCAGAGTGGCTCTTATTCGTATAGGTGTTGTTCTTGGTAAAGAAGGTGGTGCTTTAGGTATGGGAGTTTAACCTCATTATCTTCATTATTCATTCTTAATTATTTGGTTCAACTTTTATCTATTTTATTATCTATACTTCTTAAACATCCATATTTGAATAAAAGAGAATGTTTATTTTAGTTCATGTACTTTTAAAAACAATCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATTTTAAATTTTACCTCCATGATGATTGTTGTGATGTCTCGAAAAACTTAGAAATTAATTCACTTTTATTCCTACCAAAATTCATTTATTAAAAAATTGAACTCAGACTAGAGTTTTGCCTACCAAAATTCTTCATACTAATAGAGATATTTAAAGAATCATTTATGGACAAACATTTATAATACATATTATTTTAAAAAAATTACAGATTCACCTGAAAACTTTAATTCCTAAATTCCCAAACCTCTCAACAACTTTTCGGATTAAAACAAAAAAAAAATGGAGACAATTTGGCCCATTTTTTGTCGATTAGTCCATGAAATATATGTTTTAGGTTGTTCGTTTGTGATAGTTAGCTTTCTACTTTTTCCAGAAAAGATTGTTATTTTATTTTGATTCCTGGTTTAATTTAATATTTAAAGTGGGTTTTGCAGGTTTTCCTGGATTCACTTGGATGACATTGTGAACTTAATATATGAAGCTCTGACCAATCCATCTTACAACGGTAATATTTTCATTTGACATAGTTGCTTCGTAAAACATTACTAAAATAATAACTAATTTCAAATATTAATACTAATGATCCATTATTTTATCTTAACATTATTTTAATAACATCATTTTATAAGTTCAAAATAATTATTAAAAAATGTTTTTCTAATAATTTTTTTTTTAAAAAAAAAGAAAAACTAATCGTGATCGAAAAACTAAGATTAAATATATTACTAATGGATACTGGATAATGGATAATTATTTGGTTTTTAAGAGTATTTGATAATTGTGTTTCTTTTTTCAAAAAAAAAAAAAAGTTCTAAATAAATATATGAATTATAGTCCTATTTCAAAGAAATAAAATAAAAAATTTAAAACTAAAAAAGAAAATCTAAACAAAAAAAAGAGAAATCAATCATAATCGAACAGAATCTGAACTCTGGTGTCTCTAACAAACAATCCTCAGGAGTTATAAATGGAACGGCGCCGAACCCGGTTAAGTNNNNNNNNNNGATTGGGAGCTGCGATGGGCAGACCTTCATGGCTTCCTGTACCTGA

mRNA sequence

GTAATTTGCATATTTGTCGTAGTTTGAAGGGTTATCCTGATGTCGAGATTTTGAACCTCGTTCACCCCAAAGTATTTTTTTCTCCCTGACCCATTACCGATTCTCTCTTTCTTAATTAATGATCTTTCATTCCCGTCCACTCCAGTTGAGCTTCCTCGGAGAACCATTTGTTTCAATCAGCCTTACCGAGCTTAATTTTGTGATGGAAATTGCTTCTTGCCGCCCGGACCATCAAACCCGTCCTATCCTAATCTAGATCTCCTCATTTTCCCGTCTTTCCTTCTTACTGTGCTGCCGACAGAGCTCCGAGCCCACCCGCCATTATTTCCTGAATGGAGATCCCTGGCGCCATTTCCTTCTCATGGAGTCGTACTGTCTCCCATTCTATTCGCATCCCTCAACATGTGGCAATATGTGGCAAGAGGTTCAGGGTTTTCTGCGCCATTGATTCAACAGAGATGGTTGACGTTGGGGGGCTCGGCATAGTTAATTTGAAACTTCCTAGTGAGGCTTTGCTGGCTAAAATAGTTCTGGCATTTCCCATTGGAGTCGAAGATAGGGAACCATTTGACGTGTCTTCTCTTCTTTCTTCATTGGGAAACGTCCATCTTCATTCGGGTAGTAGGAATATTATTTTTTGGTCCCCTAATCCCTCCAAGGGGCTCCCTTGCTGTTCATTTTTCCTCATTTTGAGTAGCCCTCGCGCTTCTAGGAACTCGAGGAAGGTTCACCTTCTCAAGAAGATCGAATTCTTTACCTGGCAAGCCTTACATGGGAGAGTGAACACAATGGGTTGCATTCAAAAACACTCTTCCTTCTTGTTGGGGCCGCAGTGGTGCTTTCATAGTAGCAAGGCGTCTGAAAATCTGGATCACATCATGCGGAAATCCCAGTTCGCACTTCCATCATGGGACTGTTTTTTGGAGACTTTTGGTGTTCACTTAGCTCGTTATAGAGATCGTTCTCTCATGTTGGGGGAGAAAAATCAGTTCACTGTATCAATAACTGGAGCTACAGGCTTTATCGGTCGAAGACTTGTGCAAAGGCTACATACAGATAACCATAACATTCGAGTTTTGACACGCTCTAAATCTAAAGCCGAGTTGATTTTTCCGGCTAGGGAGTTTCCAGGAATTGTGATCGCAGAGGAGCCAGGGTGGAAAGACTGCATCCAAGGTTCAGATGGCGTTGTTAACTTGGCTGGGTTGCCTATAAGTACCAGGTGGTCTCCTGAGATCAAGAAAGAGATCAAGCAAAGCAGGATCAGAGTCACCTCAAAGGTTGTGAGCTTAATTAATGATGCCCCCGACGTAGCTCGCCCGACAGTTTTGGTTAGCGCAACAGCTATTGGTTACTATGGCACTAGTGAAACAGCAATATTTGACGAACGAAGTCCATCCGGAAATGACTACTTGGCCGAGGTTTGTAGGGAATGGGAAGCAACAGCCCTGGGAGCAAACAAGAACGTCAGAGTGGCTCTTATTCGTATAGGTGTTGTTCTTGGTAAAGAAGGTGGTGCTTTAGGAGTTATAAATGGAACGGCGCCGAACCCGGTTAAGTNNNNNNNNNNGATTGGGAGCTGCGATGGGCAGACCTTCATGGCTTCCTGTACCTGA

Coding sequence (CDS)

ATGGAGATCCCTGGCGCCATTTCCTTCTCATGGAGTCGTACTGTCTCCCATTCTATTCGCATCCCTCAACATGTGGCAATATGTGGCAAGAGGTTCAGGGTTTTCTGCGCCATTGATTCAACAGAGATGGTTGACGTTGGGGGGCTCGGCATAGTTAATTTGAAACTTCCTAGTGAGGCTTTGCTGGCTAAAATAGTTCTGGCATTTCCCATTGGAGTCGAAGATAGGGAACCATTTGACGTGTCTTCTCTTCTTTCTTCATTGGGAAACGTCCATCTTCATTCGGGTAGTAGGAATATTATTTTTTGGTCCCCTAATCCCTCCAAGGGGCTCCCTTGCTGTTCATTTTTCCTCATTTTGAGTAGCCCTCGCGCTTCTAGGAACTCGAGGAAGGTTCACCTTCTCAAGAAGATCGAATTCTTTACCTGGCAAGCCTTACATGGGAGAGTGAACACAATGGGTTGCATTCAAAAACACTCTTCCTTCTTGTTGGGGCCGCAGTGGTGCTTTCATAGTAGCAAGGCGTCTGAAAATCTGGATCACATCATGCGGAAATCCCAGTTCGCACTTCCATCATGGGACTGTTTTTTGGAGACTTTTGGTGTTCACTTAGCTCGTTATAGAGATCGTTCTCTCATGTTGGGGGAGAAAAATCAGTTCACTGTATCAATAACTGGAGCTACAGGCTTTATCGGTCGAAGACTTGTGCAAAGGCTACATACAGATAACCATAACATTCGAGTTTTGACACGCTCTAAATCTAAAGCCGAGTTGATTTTTCCGGCTAGGGAGTTTCCAGGAATTGTGATCGCAGAGGAGCCAGGGTGGAAAGACTGCATCCAAGGTTCAGATGGCGTTGTTAACTTGGCTGGGTTGCCTATAAGTACCAGGTGGTCTCCTGAGATCAAGAAAGAGATCAAGCAAAGCAGGATCAGAGTCACCTCAAAGGTTGTGAGCTTAATTAATGATGCCCCCGACGTAGCTCGCCCGACAGTTTTGGTTAGCGCAACAGCTATTGGTTACTATGGCACTAGTGAAACAGCAATATTTGACGAACGAAGTCCATCCGGAAATGACTACTTGGCCGAGGTTTGTAGGGAATGGGAAGCAACAGCCCTGGGAGCAAACAAGAACGTCAGAGTGGCTCTTATTCGTATAGGTGTTGTTCTTGGTAAAGAAGGTGGTGCTTTAGGAGTTATAAATGGAACGGCGCCGAACCCGGTTAAGTNNNNNNNNNNGATTGGGAGCTGCGATGGGCAGACCTTCATGGCTTCCTGTACCTGA

Protein sequence

MEIPGAISFSWSRTVSHSIRIPQHVAICGKRFRVFCAIDSTEMVDVGGLGIVNLKLPSEALLAKIVLAFPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRNSRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQFALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKNVRVALIRIGVVLGKEGGALGVINGTAPNPVKXXXXIGSCDGQTFMASCT

Homology

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BLAST of CmaCh19G006970.1 vs. ExPASy Swiss-Prot
Match: Q9SJU9 (Epimerase family protein SDR39U1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GC1 PE=2 SV=2)

HSP 1 Score: 303.5 bits (776), Expect = 3.7e-81
Identity = 161/238 (67.65%), Postives = 176/238 (73.95%), Query Frame = 0


Query: 216 EKNQFTVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPG 275
           +++Q TVS+TGATGFIGRRLVQRL  DNH IRVLTRSKSKAE IFPA++FPGIVIAEE  
Sbjct: 42  KESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPAKDFPGIVIAEESE 101

Query: 276 WKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVS 335
           WK+C+QGS  VVNLAGLPISTRWSPEIKKEIK SRIRVTSKVV LIN++P  ARPTVLVS
Sbjct: 102 WKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNSPAEARPTVLVS 161

Query: 336 ATAIGYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKNVRVALIRIGVVLGKEGG 395
           ATA+GYYGTSET +FDE SPSG DYLAEVCREWE TAL ANK+VRVALIRIGVVLGK+GG
Sbjct: 162 ATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDVRVALIRIGVVLGKDGG 221

Query: 396 AL--------------------------------------------GVINGTAPNPVK 410
           AL                                            GVINGTAPNPV+
Sbjct: 222 ALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVINGTAPNPVR 279

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BLAST of CmaCh19G006970.1 vs. ExPASy Swiss-Prot
Match: P73467 (Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1223 PE=3 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 3.1e-35
Identity = 86/182 (47.25%), Postives = 111/182 (60.99%), Query Frame = 0


Query: 222 VSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGI-VIAEEP----GW 281
           + +TGATGF+G  LV  LH   H + +L RS SKA+ +F    FP +  IA E      W
Sbjct: 3   IILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGSFPQLKAIAYEATKSGDW 62

Query: 282 KDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSA 341
           +  + G D V+NLAG PIS RW+   K EI  SR   T K+V  I  A    +P V++S 
Sbjct: 63  QKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKAD--RKPQVMISG 122

Query: 342 TAIGYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANK-NVRVALIRIGVVLGKEGG 398
           +AIGYYGTSETA F E S  G+D+LAEVC+ WE  A    +  VR+ + RIG+VLG +GG
Sbjct: 123 SAIGYYGTSETATFTESSKPGDDFLAEVCQAWENAAHQVEQLGVRLVVFRIGIVLGADGG 182

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BLAST of CmaCh19G006970.1 vs. ExPASy Swiss-Prot
Match: P77775 (Epimerase family protein YfcH OS=Escherichia coli (strain K12) OX=83333 GN=yfcH PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.9e-25
Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 222 VSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQ 281
           + ITG TG IGR L+ RL    H I V+TR+  KA  +      P + + +    +  + 
Sbjct: 3   IVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLG----PRVTLWQGLADQSNLN 62

Query: 282 GSDGVVNLAGLPIS-TRWSPEIKKEIKQSRIRVTSKVVSLIN--DAPDVARPTVLVSATA 341
           G D V+NLAG PI+  RW+ E K+ + QSR  +T K+V LIN  D P    P+VL+S +A
Sbjct: 63  GVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTP----PSVLISGSA 122

Query: 342 IGYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKN-VRVALIRIGVVLGKEGGAL 399
            GYYG     +  E  P  N++  ++C  WE  A  A  +  RV L+R GVVL  +GG L
Sbjct: 123 TGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGIL 175

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BLAST of CmaCh19G006970.1 vs. ExPASy Swiss-Prot
Match: P71373 (Epimerase family protein HI_1208 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1208 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.0e-17
Identity = 60/180 (33.33%), Postives = 93/180 (51.67%), Query Frame = 0


Query: 222 VSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQ 281
           + +TG TG IG+ LV+RL   N  + +LTRS S   L     +   I         +  +
Sbjct: 3   ILLTGGTGLIGKALVERLCLRNEQVTILTRSSSPHTL----SKHKNIKFITALSQLNSQE 62

Query: 282 GSDGVVNLAGLPISTR-WSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAIG 341
             D ++NLAG PI  + WS   K  +++SR+ +T+++V  IN      +  + +S +A G
Sbjct: 63  QFDAIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFIN---QYQQHPIFISGSATG 122

Query: 342 YYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKNVRVALIRIGVVLGKEGGALGVI 401
            YG  +     E S +   + A++C++WE  A  AN   RV LIR G+V   +GGAL  I
Sbjct: 123 IYGDQDEQKITETSKTAKTFTAQLCQDWENIAQQANG--RVCLIRTGMVFSTKGGALAKI 173

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BLAST of CmaCh19G006970.1 vs. ExPASy Swiss-Prot
Match: Q4L4J7 (Epimerase family protein SH2119 OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=SH2119 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.5e-17
Identity = 61/176 (34.66%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 224 ITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGS 283
           ITG TG +G +LV +L   + +I +LTRS  +++   P   +   V   + GW   +   
Sbjct: 6   ITGGTGMVGSQLVNKLKNRDVHITILTRSDKQSD--DPKISY---VNWSKDGWMSQVPDI 65

Query: 284 DGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYG 343
           D VVNLAG  ++ RW+P  K+ I  SRI+ T  +V L +      +P VL +A+A+GYY 
Sbjct: 66  DVVVNLAGATLNKRWTPSYKQLIMTSRIQSTQSLVDLFSQREH--KPEVLFNASAMGYYP 125

Query: 344 TSETAIFDERSPSGN-DYLAEVCREWEATALGANK-NVRVALIRIGVVLGKEGGAL 398
            S    + E+  +   D+L++V  +WE  A        RV L R  ++L  +GGAL
Sbjct: 126 PSLYHTYTEKYQTHPFDFLSDVVYQWERFAKRFESFGTRVVLGRFSMILSNDGGAL 174

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BLAST of CmaCh19G006970.1 vs. ExPASy TrEMBL
Match: A0A6J1HZE6 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468077 PE=3 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 2.3e-187
Identity = 325/331 (98.19%), Postives = 327/331 (98.79%), Query Frame = 0


Query: 69  FPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN 128
           F   + DREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN
Sbjct: 9   FGYPLSDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN 68

Query: 129 SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF 188
           SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF
Sbjct: 69  SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF 128

Query: 189 ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV 248
           ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV
Sbjct: 129 ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV 188

Query: 249 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 308
           LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ
Sbjct: 189 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 248

Query: 309 SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW 368
           SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW
Sbjct: 249 SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW 308

Query: 369 EATALGANKNVRVALIRIGVVLGKEGGALGV 400
           EATALGANKNVRVALIRIGVVLGKEGGALG+
Sbjct: 309 EATALGANKNVRVALIRIGVVLGKEGGALGM 339

[Close]

BLAST of CmaCh19G006970.1 vs. ExPASy TrEMBL
Match: A0A6J1GM24 (epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455484 PE=3 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 4.9e-177
Identity = 320/385 (83.12%), Postives = 326/385 (84.68%), Query Frame = 0


Query: 69  FPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN 128
           F   + DRE FD+SSLLSSLGNVHLHS SRN+IFWSPNPSKGLP CSFFLILSSPRASRN
Sbjct: 9   FGYPLSDRESFDMSSLLSSLGNVHLHSSSRNVIFWSPNPSKGLPYCSFFLILSSPRASRN 68

Query: 129 SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF 188
           SRKVHLLK +EFFT QALHGRVNTMGCI+KH SFLL P WC HSSKASENLDHIMRKSQF
Sbjct: 69  SRKVHLLKNVEFFTRQALHGRVNTMGCIKKHPSFLLRPHWCLHSSKASENLDHIMRKSQF 128

Query: 189 ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV 248
           ALPSWDCFLETFGV LARYRDRSLMLGEKNQ TVSITGATGFIGRRLVQRLHTDNHNIRV
Sbjct: 129 ALPSWDCFLETFGVRLARYRDRSLMLGEKNQLTVSITGATGFIGRRLVQRLHTDNHNIRV 188

Query: 249 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 308
           LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ
Sbjct: 189 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 248

Query: 309 SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW 368
           SRIRVTSKVVSLINDAPDVARPTVLVSATA+GYYGTSETAIFDERSPSGNDYLAEVCREW
Sbjct: 249 SRIRVTSKVVSLINDAPDVARPTVLVSATAVGYYGTSETAIFDERSPSGNDYLAEVCREW 308

Query: 369 EATALGANKNVRVALIRIGVVLGKEGGAL------------------------------- 410
           EATALGANKNVRVALIRIGVVLGKEGGAL                               
Sbjct: 309 EATALGANKNVRVALIRIGVVLGKEGGALAKMIPLFNLFAGGPLGSGRQWFSWIHLDDIV 368

[Close]

BLAST of CmaCh19G006970.1 vs. ExPASy TrEMBL
Match: A0A5D3BCM9 (Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00360 PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 7.4e-141
Identity = 273/386 (70.73%), Postives = 287/386 (74.35%), Query Frame = 0


Query: 67  LAFPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRAS 126
           + F   + D E FD+SS+LS LG+ HLH  SR+I F SPNPSKGL   SF  IL SP  S
Sbjct: 7   VGFCCPLSDSESFDMSSILSLLGDGHLHLRSRSISFCSPNPSKGL-SGSFSFILGSPCTS 66

Query: 127 RNSRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKS 186
           RN RKV + KK+  F W ALH RVN M CIQ HSSFLLG QWCF  SK SENL+HI  + 
Sbjct: 67  RNLRKVKISKKVNVFAWHALHERVNGMACIQTHSSFLLGLQWCFLCSKLSENLNHIFGRF 126

Query: 187 QFALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNI 246
           QFAL    CFLETFGV LAR   R LMLG+KNQ TVSITGATGFIGRRLVQRLH D HNI
Sbjct: 127 QFALLIQKCFLETFGVCLARNGGRLLMLGKKNQLTVSITGATGFIGRRLVQRLHADKHNI 186

Query: 247 RVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEI 306
           RVLTRSKSKAELIFPAREFPGI+IAEEPGWKDCIQGSDGVVNLAG+PISTRWS EIKKEI
Sbjct: 187 RVLTRSKSKAELIFPAREFPGIMIAEEPGWKDCIQGSDGVVNLAGMPISTRWSSEIKKEI 246

Query: 307 KQSRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCR 366
           KQSRIRVTSKVVSLINDAPD ARPTVLVSATA+GYYGTSETA FDERSPSGNDYLAEVCR
Sbjct: 247 KQSRIRVTSKVVSLINDAPDAARPTVLVSATAVGYYGTSETATFDERSPSGNDYLAEVCR 306

Query: 367 EWEATALGANKNVRVALIRIGVVLGKEGGAL----------------------------- 409
           EWEATALG NKNVRVALIRIGVVLGKEGGAL                             
Sbjct: 307 EWEATALGVNKNVRVALIRIGVVLGKEGGALAKMIPLFMMFAGGPLGSGKQWFSWIHLDD 366

[Close]

BLAST of CmaCh19G006970.1 vs. ExPASy TrEMBL
Match: A0A5A7UID7 (Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G001130 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.6e-140
Identity = 262/331 (79.15%), Postives = 276/331 (83.38%), Query Frame = 0


Query: 67  LAFPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRAS 126
           + F   + D E FD+SS+LS LG+ HLH  SR+I F SPNPSKGL   SF  IL SP  S
Sbjct: 7   VGFCCPLSDSESFDMSSILSLLGDGHLHLRSRSISFCSPNPSKGL-SGSFSFILGSPCTS 66

Query: 127 RNSRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKS 186
           RN RKV + KK+  F W ALH RVN M CIQ HSSFLLG QWCF  SK SENL+HI  + 
Sbjct: 67  RNLRKVKISKKVNVFAWHALHERVNGMACIQTHSSFLLGLQWCFLCSKLSENLNHIFGRF 126

Query: 187 QFALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNI 246
           QFAL    CFLETFGV LAR   R LMLG+KNQ TVSITGATGFIGRRLVQRLH D HNI
Sbjct: 127 QFALLIQKCFLETFGVCLARNGGRLLMLGKKNQLTVSITGATGFIGRRLVQRLHADKHNI 186

Query: 247 RVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEI 306
           RVLTRSKSKAELIFPAREFPGI+IAEEPGWKDCIQGSDGVVNLAG+PISTRWS EIKKEI
Sbjct: 187 RVLTRSKSKAELIFPAREFPGIMIAEEPGWKDCIQGSDGVVNLAGMPISTRWSSEIKKEI 246

Query: 307 KQSRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCR 366
           KQSRIRVTSKVVSLINDAPD ARPTVLVSATA+GYYGTSETA FDERSPSGNDYLAEVCR
Sbjct: 247 KQSRIRVTSKVVSLINDAPDAARPTVLVSATAVGYYGTSETATFDERSPSGNDYLAEVCR 306

Query: 367 EWEATALGANKNVRVALIRIGVVLGKEGGAL 398
           EWEATALG NKNVRVALIRIGVVLGKEGGAL
Sbjct: 307 EWEATALGVNKNVRVALIRIGVVLGKEGGAL 336

[Close]

BLAST of CmaCh19G006970.1 vs. ExPASy TrEMBL
Match: A0A6J1GNA8 (epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455484 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99
Identity = 229/453 (50.55%), Postives = 233/453 (51.43%), Query Frame = 0


Query: 1   MEIPGAISFSWSRTVSHSIRIPQHVAICGKRFRVFCAIDSTEMVDVGGLGIVNLKLPSEA 60
           M+ PGAISFSW+RTVSHSIRIPQHVAICGKRFR FCAID+TEM                 
Sbjct: 1   MKTPGAISFSWTRTVSHSIRIPQHVAICGKRFRAFCAIDATEM----------------- 60

Query: 61  LLAKIVLAFPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLIL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 SSPRASRNSRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLD 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 HIMRKSQFALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLH 240
                                               KNQ TVSITGATGFIGRRLVQRLH
Sbjct: 181 ------------------------------------KNQLTVSITGATGFIGRRLVQRLH 240

Query: 241 TDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSP 300
           TDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSP
Sbjct: 241 TDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSP 280

Query: 301 EIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDY 360
           EIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATA+GYYGTSETAIFDERSPSGNDY
Sbjct: 301 EIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAVGYYGTSETAIFDERSPSGNDY 280

Query: 361 LAEVCREWEATALGANKNVRVALIRIGVVLGKEGGAL----------------------- 410
           LAEVCREWEATALGANKNVRVALIRIGVVLGKEGGAL                       
Sbjct: 361 LAEVCREWEATALGANKNVRVALIRIGVVLGKEGGALAKMIPLFNLFAGGPLGSGRQWFS 280

[Close]

BLAST of CmaCh19G006970.1 vs. NCBI nr
Match: KAG7011736.1 (Epimerase family protein SDR39U1-like, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 696.8 bits (1797), Expect = 1.2e-196
Identity = 363/474 (76.58%), Postives = 374/474 (78.90%), Query Frame = 0


Query: 1   MEIPGAISFSWSRTVSHSIRIPQHVAICGKRFRVFCAIDSTEM-------------VDVG 60
           MEIPGAISFSWSRTVSHSIRIPQHVAICGKRFR FCAID+TEM             + +G
Sbjct: 1   MEIPGAISFSWSRTVSHSIRIPQHVAICGKRFRFFCAIDATEMLCEPDTFKNSRLAISLG 60

Query: 61  GLGIVNL--------KLPSEALLAKIVLAFPIGVEDREPFDVSSLLSSLGNVHLHSGSRN 120
           G     L         L    +   +   F   + DRE FDVSSLLSSLG VHLHS SRN
Sbjct: 61  GNPFCTLFPCLYHLSSLGLYPMAYSLDFGFGYPLSDRESFDVSSLLSSLGKVHLHSSSRN 120

Query: 121 IIFWSPNPSKGLPCCSFFLILSSPRASRNSRKVHLLKKIEFFTWQALHGRVNTMGCIQKH 180
           +IFWSPNPSKGLP CSFFLILSSPRASRNSRKVHLLK +EFFT QALHGRVNTMGCI+KH
Sbjct: 121 VIFWSPNPSKGLPYCSFFLILSSPRASRNSRKVHLLKNVEFFTRQALHGRVNTMGCIKKH 180

Query: 181 SSFLLGPQWCFHSSKASENLDHIMRKSQFALPSWDCFLETFGVHLARYRDRSLMLGEKNQ 240
            SFLL P WC HSSKASENLDHIMRKSQFALPSWDCFLETFGV LARYR+RSLMLGEKNQ
Sbjct: 181 PSFLLRPHWCLHSSKASENLDHIMRKSQFALPSWDCFLETFGVRLARYRNRSLMLGEKNQ 240

Query: 241 FTVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPGWKDC 300
            TVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEE GWKDC
Sbjct: 241 LTVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEERGWKDC 300

Query: 301 IQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAI 360
           IQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATA+
Sbjct: 301 IQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAV 360

Query: 361 GYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKNVRVALIRIGVVLGKEGGAL-- 410
           GYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKNVRVALIRIGVVLGKEGGAL  
Sbjct: 361 GYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKNVRVALIRIGVVLGKEGGALAK 420

[Close]

BLAST of CmaCh19G006970.1 vs. NCBI nr
Match: XP_022968893.1 (epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 664.8 bits (1714), Expect = 4.8e-187
Identity = 325/331 (98.19%), Postives = 327/331 (98.79%), Query Frame = 0


Query: 69  FPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN 128
           F   + DREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN
Sbjct: 9   FGYPLSDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN 68

Query: 129 SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF 188
           SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF
Sbjct: 69  SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF 128

Query: 189 ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV 248
           ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV
Sbjct: 129 ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV 188

Query: 249 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 308
           LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ
Sbjct: 189 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 248

Query: 309 SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW 368
           SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW
Sbjct: 249 SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW 308

Query: 369 EATALGANKNVRVALIRIGVVLGKEGGALGV 400
           EATALGANKNVRVALIRIGVVLGKEGGALG+
Sbjct: 309 EATALGANKNVRVALIRIGVVLGKEGGALGM 339

[Close]

BLAST of CmaCh19G006970.1 vs. NCBI nr
Match: XP_023554066.1 (epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.8 bits (1649), Expect = 1.7e-179
Identity = 323/385 (83.90%), Postives = 329/385 (85.45%), Query Frame = 0


Query: 69  FPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN 128
           F   + DRE FDVSSLLSSLGNVHLHS SRNIIFWSPNPSKGLP CSFFLILSSPRASRN
Sbjct: 9   FGYPLSDRESFDVSSLLSSLGNVHLHSSSRNIIFWSPNPSKGLPYCSFFLILSSPRASRN 68

Query: 129 SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF 188
           SRKVHLLKK+EFFTWQALHGRVNTMGCI+KH SFLLGP WCFHSSKASENLDHI+RKSQF
Sbjct: 69  SRKVHLLKKVEFFTWQALHGRVNTMGCIKKHPSFLLGPHWCFHSSKASENLDHIIRKSQF 128

Query: 189 ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV 248
           ALPSWDCFLETFGV LARYRDRSLMLGEKNQ TVSITGATGFIGRRLVQRLHTDNHNIRV
Sbjct: 129 ALPSWDCFLETFGVRLARYRDRSLMLGEKNQLTVSITGATGFIGRRLVQRLHTDNHNIRV 188

Query: 249 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 308
           LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ
Sbjct: 189 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 248

Query: 309 SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW 368
           SRIRVTSKVVSLINDAPD+ARPTVLVSATA+GYYGTSETAIFDERSPSGNDYLAEVCREW
Sbjct: 249 SRIRVTSKVVSLINDAPDIARPTVLVSATAVGYYGTSETAIFDERSPSGNDYLAEVCREW 308

Query: 369 EATALGANKNVRVALIRIGVVLGKEGGAL------------------------------- 410
           EATAL ANKNVRVALIRIGVVLGKEGGAL                               
Sbjct: 309 EATALRANKNVRVALIRIGVVLGKEGGALAKMIPLFNLFAGGPLGSGQQWFSWIHLDDIV 368

[Close]

BLAST of CmaCh19G006970.1 vs. NCBI nr
Match: XP_022952963.1 (epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 630.6 bits (1625), Expect = 1.0e-176
Identity = 320/385 (83.12%), Postives = 326/385 (84.68%), Query Frame = 0


Query: 69  FPIGVEDREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRN 128
           F   + DRE FD+SSLLSSLGNVHLHS SRN+IFWSPNPSKGLP CSFFLILSSPRASRN
Sbjct: 9   FGYPLSDRESFDMSSLLSSLGNVHLHSSSRNVIFWSPNPSKGLPYCSFFLILSSPRASRN 68

Query: 129 SRKVHLLKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQF 188
           SRKVHLLK +EFFT QALHGRVNTMGCI+KH SFLL P WC HSSKASENLDHIMRKSQF
Sbjct: 69  SRKVHLLKNVEFFTRQALHGRVNTMGCIKKHPSFLLRPHWCLHSSKASENLDHIMRKSQF 128

Query: 189 ALPSWDCFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRV 248
           ALPSWDCFLETFGV LARYRDRSLMLGEKNQ TVSITGATGFIGRRLVQRLHTDNHNIRV
Sbjct: 129 ALPSWDCFLETFGVRLARYRDRSLMLGEKNQLTVSITGATGFIGRRLVQRLHTDNHNIRV 188

Query: 249 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 308
           LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ
Sbjct: 189 LTRSKSKAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQ 248

Query: 309 SRIRVTSKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREW 368
           SRIRVTSKVVSLINDAPDVARPTVLVSATA+GYYGTSETAIFDERSPSGNDYLAEVCREW
Sbjct: 249 SRIRVTSKVVSLINDAPDVARPTVLVSATAVGYYGTSETAIFDERSPSGNDYLAEVCREW 308

Query: 369 EATALGANKNVRVALIRIGVVLGKEGGAL------------------------------- 410
           EATALGANKNVRVALIRIGVVLGKEGGAL                               
Sbjct: 309 EATALGANKNVRVALIRIGVVLGKEGGALAKMIPLFNLFAGGPLGSGRQWFSWIHLDDIV 368

[Close]

BLAST of CmaCh19G006970.1 vs. NCBI nr
Match: XP_038887741.1 (epimerase family protein SDR39U1 homolog, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 542.3 bits (1396), Expect = 3.6e-150
Identity = 280/378 (74.07%), Postives = 293/378 (77.51%), Query Frame = 0


Query: 75  DREPFDVSSLLSSLGNVHLHSGSRNIIFWSPNPSKGLPCCSFFLILSSPRASRNSRKVHL 134
           DRE F +SSLLS LG++HLHS  RNI FWSPNPSKGL  CSF LIL SP  SRN RKV +
Sbjct: 15  DRESFVMSSLLSLLGDIHLHSRRRNISFWSPNPSKGL-SCSFSLILGSPHTSRNLRKVKI 74

Query: 135 LKKIEFFTWQALHGRVNTMGCIQKHSSFLLGPQWCFHSSKASENLDHIMRKSQFALPSWD 194
            K + FF WQALHGRVNTM CIQ HSSFLLG QWCF  SK SENLDHI  + QFAL +W+
Sbjct: 75  SKMVNFFAWQALHGRVNTMSCIQSHSSFLLGLQWCFLCSKLSENLDHISVRCQFALSTWN 134

Query: 195 CFLETFGVHLARYRDRSLMLGEKNQFTVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKS 254
           CFLE FGV LARYRD  LMLG+K+Q TVSITGATGFIGRRLVQRLH D H IRVLTRSKS
Sbjct: 135 CFLEAFGVCLARYRDHPLMLGKKSQLTVSITGATGFIGRRLVQRLHADKHKIRVLTRSKS 194

Query: 255 KAELIFPAREFPGIVIAEEPGWKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVT 314
           KAELIFPA +FPGIVIAEEPGWKDCIQGSDGVVNLAG+PISTRWS EIKKEIKQSRIRVT
Sbjct: 195 KAELIFPAGKFPGIVIAEEPGWKDCIQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVT 254

Query: 315 SKVVSLINDAPDVARPTVLVSATAIGYYGTSETAIFDERSPSGNDYLAEVCREWEATALG 374
           SKVVSLINDAPD ARPTVLVSATA+GYYGTSETA FDERSPSGNDYLAEVCREWEATALG
Sbjct: 255 SKVVSLINDAPDAARPTVLVSATAVGYYGTSETATFDERSPSGNDYLAEVCREWEATALG 314

Query: 375 ANKNVRVALIRIGVVLGKEGGAL------------------------------------- 409
            NKNVRVALIRIGVVLGKEGGAL                                     
Sbjct: 315 VNKNVRVALIRIGVVLGKEGGALAKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEA 374

[Close]

BLAST of CmaCh19G006970.1 vs. TAIR 10
Match: AT2G21280.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 303.5 bits (776), Expect = 2.6e-82
Identity = 161/238 (67.65%), Postives = 176/238 (73.95%), Query Frame = 0


Query: 216 EKNQFTVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIVIAEEPG 275
           +++Q TVS+TGATGFIGRRLVQRL  DNH IRVLTRSKSKAE IFPA++FPGIVIAEE  
Sbjct: 42  KESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPAKDFPGIVIAEESE 101

Query: 276 WKDCIQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVS 335
           WK+C+QGS  VVNLAGLPISTRWSPEIKKEIK SRIRVTSKVV LIN++P  ARPTVLVS
Sbjct: 102 WKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNSPAEARPTVLVS 161

Query: 336 ATAIGYYGTSETAIFDERSPSGNDYLAEVCREWEATALGANKNVRVALIRIGVVLGKEGG 395
           ATA+GYYGTSET +FDE SPSG DYLAEVCREWE TAL ANK+VRVALIRIGVVLGK+GG
Sbjct: 162 ATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDVRVALIRIGVVLGKDGG 221

Query: 396 AL--------------------------------------------GVINGTAPNPVK 410
           AL                                            GVINGTAPNPV+
Sbjct: 222 ALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVINGTAPNPVR 279

[Close]

BLAST of CmaCh19G006970.1 vs. TAIR 10
Match: AT5G42800.1 (dihydroflavonol 4-reductase )

HSP 1 Score: 43.1 bits (100), Expect = 6.4e-04
Identity = 25/79 (31.65%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 221 TVSITGATGFIGRRLVQRLHTDNHNIRVLTRSKSKAELIFPAREFPGIV---------IA 280
           TV +TGA+GFIG  LV RL    + +R   R     + +    + P            ++
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLS 66

Query: 281 EEPGWKDCIQGSDGVVNLA 291
           EE  + D I G DGV ++A
Sbjct: 67  EEGSYDDAINGCDGVFHVA 85

The following BLAST results are available for this feature:

BLAST of CmaCh19G006970.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJU9	3.7e-81	67.65	Epimerase family protein SDR39U1 homolog, chloroplastic OS=Arabidopsis thaliana ...	[more]
P73467	3.1e-35	47.25	Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
P77775	2.9e-25	39.78	Epimerase family protein YfcH OS=Escherichia coli (strain K12) OX=83333 GN=yfcH ...	[more]
P71373	1.0e-17	33.33	Epimerase family protein HI_1208 OS=Haemophilus influenzae (strain ATCC 51907 / ...	[more]
Q4L4J7	6.5e-17	34.66	Epimerase family protein SH2119 OS=Staphylococcus haemolyticus (strain JCSC1435)...	[more]

BLAST of CmaCh19G006970.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZE6	2.3e-187	98.19	epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A6J1GM24	4.9e-177	83.12	epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 OS=Cucur...	[more]
A0A5D3BCM9	7.4e-141	70.73	Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7UID7	1.6e-140	79.15	Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1GNA8	4.1e-99	50.55	epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X2 OS=Cucur...	[more]

BLAST of CmaCh19G006970.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011736.1	1.2e-196	76.58	Epimerase family protein SDR39U1-like, chloroplastic [Cucurbita argyrosperma sub...	[more]
XP_022968893.1	4.8e-187	98.19	epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita maxima]	[more]
XP_023554066.1	1.7e-179	83.90	epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 [Cucurbi...	[more]
XP_022952963.1	1.0e-176	83.12	epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 [Cucurbi...	[more]
XP_038887741.1	3.6e-150	74.07	epimerase family protein SDR39U1 homolog, chloroplastic isoform X1 [Benincasa hi...	[more]

BLAST of CmaCh19G006970.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21280.1	2.6e-82	67.65	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G42800.1	6.4e-04	31.65	dihydroflavonol 4-reductase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 216..419 e-value: 2.1E-39 score: 137.8
None	No IPR available	PANTHER	PTHR11092	SUGAR NUCLEOTIDE EPIMERASE RELATED	coord: 218..398
None	No IPR available	PANTHER	PTHR11092:SF0	EPIMERASE FAMILY PROTEIN SDR39U1	coord: 218..398
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 223..393 e-value: 1.3E-10 score: 41.1
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 219..398

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh19G006970	CmaCh19G006970	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G006970.1:exon:2685	CmaCh19G006970.1:exon:2685	exon
CmaCh19G006970.1:exon:2686	CmaCh19G006970.1:exon:2686	exon
CmaCh19G006970.1:exon:2687	CmaCh19G006970.1:exon:2687	exon
CmaCh19G006970.1:exon:2688	CmaCh19G006970.1:exon:2688	exon
CmaCh19G006970.1:exon:2689	CmaCh19G006970.1:exon:2689	exon
CmaCh19G006970.1:exon:2690	CmaCh19G006970.1:exon:2690	exon
CmaCh19G006970.1:exon:2691	CmaCh19G006970.1:exon:2691	exon
CmaCh19G006970.1:exon:2692	CmaCh19G006970.1:exon:2692	exon
CmaCh19G006970.1:exon:2693	CmaCh19G006970.1:exon:2693	exon
CmaCh19G006970.1:exon:2694	CmaCh19G006970.1:exon:2694	exon
CmaCh19G006970.1:exon:2695	CmaCh19G006970.1:exon:2695	exon
CmaCh19G006970.1:exon:2696	CmaCh19G006970.1:exon:2696	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G006970.1:five_prime_utr	CmaCh19G006970.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_2	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_3	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_4	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_5	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_6	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_7	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_8	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_9	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_10	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_11	CDS
CmaCh19G006970.1:cds	CmaCh19G006970.1:cds_12	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh19G006970.1	CmaCh19G006970.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity