CmaCh19G003020.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh19G003020.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr19: 2441295 .. 2444442 (+)
Sequence length456
RNA-Seq ExpressionCmaCh19G003020.1
SyntenyCmaCh19G003020.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGTTTCTCGCCTCTCTGGTGCTCACTTTTCTTGGAGAACTTCCACAGATGTTATGCCTTTCGTGCTCACTCCTCTTAGAACACTTCTAGGAGTGTTGCTTCCCTCTCTCGTACTCACTCCTCTTAGAACACTTTTACGAGCGTTGCTCACCTCTCTCATGCTCACTTTTCTTGGAACACTTTCACTGACGTTACTTCCACGAGCCTTGCTTTCGTCTTTCGTACTCACTCCTCTTGGAGCACTTTCACGAGTTTTGCTTGCCTCCCTCGTGCTCACTCTTCTTGGGTTGGGTTAGGTCTTGGAGACAATATATGCTAACTTAGGCTAATCCTTGGATAGAGAAAATAAAATAATATACAATATGTCTCTTTTTTTAACAAATAATTCAGTTTTTTTTTTCTTCTTTTTTTTTTTTTTAATATGACTTGTTACTTCTTATTTTATTATTTTATAAAATTGAAAATATGCTGCTACAAAAGCAATGTAAATTTTTACACATTATTTTGTACTTTTCGCTCTAGTTGAGGAAAAGAGTATAATAGGCGGGTTTATATGGGTGCATGTGGAACATAGCTTAGAATGGAGTATGATTATGCAGGAAAAATTGCATTTGAAGTACCTGCAGTTTCCCTTGTTATCTGTTGACTTGACCGCTTGTGATTTATTTGAAATGAATATTTTCTTCTGAGAAATTTTCAAGTCAACTAATTACATGATGGAAATATTGGTAACATTACTAATATTATTGGGATATGAGCAAGGGTAGAGTGGTAATTAGCTAAGCAGTTTAGTGGAGGAAATGAGATTATATTTTGAGTGGTCCATCCAAAGTGGGTGGATTATGGGAGAGAGATAGCCCTCTCCAAAGGCTTTTGTTATATTGTAATCTATTCTTTGATGTTGCAAGATTTTTTAGTGTGTTTTCTTATATTCAGGTACCTAATACAGCTTTAGAAAAGAGAATAATTATGCAGGAAAAACTGCATTTATACCTGCAATTTCCGTTGGTATCTATTGACTTGACCTTTTTATTTGTTTGGGTTGAATACTTTCTTCTGAGAGGACTTGCTTCCAAGTCAATCAATTGGAAGACGGAAATTTCTTTTAAGATAGTTGTAACCGCTCAAATCCACTGCTAGCAGATATTGTCATTTTTGAGCTTTTCCTCTCAGACTTCTTCTTAATGTTTTTAAAATGCGTCTGCTAGGGAGAGATTTCCACCCTCTTATAAAGAATGATTTGTTTCCCTCTCCAACCGATCTCCAACCGATGTGGGATTTCATAATTCACCCCCCTTTGAGGCTCAGCATCTTCGCTAGCACTAGTTATCTCAAAATCCACCCCTTTTGGTGCCCTGAGTCATTGCTGGTATTCGTTCTTCTCTTCAGTCGATGTGGGATCTCACAATCCACTCCCTTCGGGGCCCAGCGTCCTTATTGGCATTTGTTTTTCTCTCAAATCGATGTGAGATCTCACAATCCACCTCCCATCGGCACCCAGCGTCCTTGTTGGCATTCGTTATTCTCTCCAATCAATGTGGGATCTCACAATCCATCCCTTTTAGGGTCCAGCGTCCTTGCTGACAAACCACCCAGTGTCCACCCTCCTTCGAGGCTCAGCGTCCTCGCTGGCACACCGCCCGGTGTCTACGCCAGCAAGAACACTGGGCCGTTATTGCAGTTACTCTGGTAATAAAATCACAATGAGGGGGAGGATATTTGGATGTGCCTTTTTCAATATCTTTAAAAGTCTTAAGATCTGAATTTTTTCAGGAATTGTGCAGCATAAACTTGAAGGAGTAAATGCAAAATTTACTTTTGTACTATTAGCTTGTTATATATCTTCTTTCATTTCGATCATTTATCCTCCTAAGCTTATGAAATTGTCACCATTTTAACTTCGTTAATTATACTTTGAACTAAAGAGGTAAGATGAAACCTTTAAAATAGTTACAATGATGTTCCAATAAAATCTCTTGTTTTAAATAAGCCTAACCATTTCCATATGAAACCTCTTATTAAGTATTGGAGCATGCAATTATTGGAGTGATTTGTGCAGTCATTTCTAAATTTAATTGATCCGAGTAAAATGTGAATTATTATGGATTCAAACTTTTCTTCATTTCAAGCCTTAAACTGTCAAATGTTGCAAAGATGGTTGTATGTGAAATGTTGTTGTGGTGCTGATTTTCTTCCTTTGATATGTCAGCTTGGAGGATTTCTAGGTGGGGTAGCGGCATCGTGGCTTCTTGGGCCTGCCTGGAAGCAGGAACCTTCTTTCAACAATGGCCGAAGAACATTTACAGACAGGGCTCCAATTTTTTACCTCATCAATTGGAGAAAAAGAACCTAGATGAGGTTAGTATCATTTTCTCAGCATTTGAATGTCTTGTATCTCTTGGAAAATTGCATTCTCTGTAAGCTTTTTGGTCAATATAAATGGGGGGAAAAATTGTAGAAGCATCAAGTTCTAGTTGCGAAGAATGTGCATGTACAGATGTACTCCTAATATTAGCCTTGCAAGGTCTACTTTTCTATAGTTTTAGGCCATAGAAACTGAAGTCGGTGTATATTTTGATTTGAAAAATGGTTGTGTCCCAGCAACGAATTTGATCATTTTGGCTCAATAGGGGTGTTTTATGACCCGATAATTTGACTAATTTAGACTATTTAATCCAATTCAATTGGATGGTGTTAGATTTGTTTTTGCCTATTGAGTTGGGTTAAATTTTTAAAAACTAAAAATTTGGTTTGGTTTGCAAATTGACATTTTTTTTACTGGGTCAATTCAACCGATTCAAAAGTAGGGTTACAATTCAACTTAACTTATCATTTAAAAAAATATGGTTACAATTCAAATCTTATCATTTAAAAAAAATTAAGATTATTCAACCTTAGTGATGTATTGTGATGTGTTATAACTTGTAAATATTTGATATTAAAATTTATGAAATTTTAATTATTAATGTAACATGTATGGTGGGATAAGTAGAATATTTTTAATAATTAAAAAAATTAAAAAAAAAACAACCCGACAACTCAACTTAACTTGAAAAATATAAGGTTGTAAACTCTATTGGGATTGCTCCGGTGATTGGTATTTAGATAATTATTTGGTATTTAAAAATGAAGTATAAAACTTAA

mRNA sequence

ATGGGCGTTTCTCGCCTCTCTGGTGCTCACTTTTCTTGGAGAACTTCCACAGATGTTATGCCTTTCGTGCTCACTCCTCTTAGAACACTTCTAGGAGTGTTGCTTCCCTCTCTCGTACTCACTCCTCTTAGAACACTTTTACGAGCGTTGCTCACCTCTCTCATGCTCACTTTTCTTGGAACACTTTCACTGACGTTACTTCCACGAGCCTTGCTTTCGTCTTTCGTACTCACTCCTCTTGGAGCACTTTCACGAGTTTTGCTTGCCTCCCTCGTGCTCACTCTTCTTGGGTTGGCTTGGAGGATTTCTAGGTGGGGTAGCGGCATCGTGGCTTCTTGGGCCTGCCTGGAAGCAGGAACCTTCTTTCAACAATGGCCGAAGAACATTTACAGACAGGGCTCCAATTTTTTACCTCATCAATTGGAGAAAAAGAACCTAGATGAGTATAAAACTTAA

Coding sequence (CDS)

ATGGGCGTTTCTCGCCTCTCTGGTGCTCACTTTTCTTGGAGAACTTCCACAGATGTTATGCCTTTCGTGCTCACTCCTCTTAGAACACTTCTAGGAGTGTTGCTTCCCTCTCTCGTACTCACTCCTCTTAGAACACTTTTACGAGCGTTGCTCACCTCTCTCATGCTCACTTTTCTTGGAACACTTTCACTGACGTTACTTCCACGAGCCTTGCTTTCGTCTTTCGTACTCACTCCTCTTGGAGCACTTTCACGAGTTTTGCTTGCCTCCCTCGTGCTCACTCTTCTTGGGTTGGCTTGGAGGATTTCTAGGTGGGGTAGCGGCATCGTGGCTTCTTGGGCCTGCCTGGAAGCAGGAACCTTCTTTCAACAATGGCCGAAGAACATTTACAGACAGGGCTCCAATTTTTTACCTCATCAATTGGAGAAAAAGAACCTAGATGAGTATAAAACTTAA

Protein sequence

MGVSRLSGAHFSWRTSTDVMPFVLTPLRTLLGVLLPSLVLTPLRTLLRALLTSLMLTFLGTLSLTLLPRALLSSFVLTPLGALSRVLLASLVLTLLGLAWRISRWGSGIVASWACLEAGTFFQQWPKNIYRQGSNFLPHQLEKKNLDEYKT
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh19G003020.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G003020.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G003020.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G003020.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh19G003020CmaCh19G003020gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh19G003020.1:exon:1066CmaCh19G003020.1:exon:1066exon
CmaCh19G003020.1:exon:1067CmaCh19G003020.1:exon:1067exon
CmaCh19G003020.1:exon:1068CmaCh19G003020.1:exon:1068exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh19G003020.1:cdsCmaCh19G003020.1:cdsCDS
CmaCh19G003020.1:cdsCmaCh19G003020.1:cds_2CDS
CmaCh19G003020.1:cdsCmaCh19G003020.1:cds_3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh19G003020.1CmaCh19G003020.1-proteinpolypeptide