CmaCh18G005750.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G005750.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr18: 3871084 .. 3873742 (+)
Sequence length	279
RNA-Seq Expression	CmaCh18G005750.1
Synteny	CmaCh18G005750.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCAACAAATTGAATTGGACCTACAAGGAGATCAAAACCAGAATGAACAAGTAAATATTTGAAGGTTCAGTTTCGCTGAAAGCAACAAAAGATGGTATTTTTCTTCTGGTAATCAATAACAAGCAAGATATGAATGAAGTATATGAGATATTGATATGAGAGGTTGATGTTTGAGGCCGAATACCGACCTGGACTGATGTAGCAGTTCTCGATAGCCCACTCGTCTCGTAGCAATGCAAATTTCTTGAAAGGTTCACCTGACCATAAAATCATGGAATTTTTAGTATGATGCTTCGCTTTCTGGCTTGCAGAACAGAAAAATGACATCCAAATTATACTTGTGAATGAGGAAGATAGGATATAGTAATAATGTTCCTTCAGAAATATTACCATCAAGTTCCACCATTGCCTTCTTGATCACAGGCTTGAACTTACCTGTCAAATGAATTCGACCTTTAGAAAGAGATCAAATGATAAATATTAAACTAGGCCTCATGAAATTGTTCAATCGGTCAGTCCCATGCCGTTCGAAGTTGTGATGAGTGTTGAGGATCGTTGGGAGGGAGTCCCATAGCTAATTTAGGGAATGATCATGGATTTATAAGTAAGAAATACATCTCCATTGGTATGAGGCCTTTTAGGGAAGCCCAAAGAAAAGTCAGAGAGCTTATGTTCAAAGTGGACAATATTATACCATTGTAAAGGGTCATGGTTCCTAATAATGAGAAGATAATTGTCTTTAGACAGAATATGTGATGATACTCTACTTCTCTCCATATCTTTCTAATCTTATAAAGAAGTTCAGACCTACATATGTACACTTTCACTAATCCCACTATGTCGGGTTTAGCAACTAGTACGATATTTTATACCTAGGGTTGAGTTGTCTTATGAGAACAATCGAGATATGTGCTAGTTGGATCAGATACTCACAAAGTATATTTATATATAAAACAAAAATATATTTTATAACTAACATAGAAACCATAATTTAAACTTATGAAAGGCACCATATTTTGAACTTATTAAAGGTACTAAGTGTGTAACTTGTCGCCCTAGTTTAAACGTTCCTTTTGCAATTTTTATTACTCATGTATAGGAAACTTTGATGTCATTTCGATTTGTAGGTAAACTCCATTGCTCTTATTTTGGGAGGATTCTTTATACCTGCCATTTTCGTTTCTAATTCCTCAAAAAGGTAATCTAAGAGAGAAAAGGAATGCATGTTGTCGTCGATAAAGCTTACCGTGTCTCCTCTCCACGTCCATTAGTGAAGTCAATGCAGTTCCACCAGCCGTCCATTCTTCAACTGGAGCAGCCAAATTTCCTACCTGGTAGACATGATTAACATATAAACAATAGAAATGAGGAACAAGAACTCTAGAGGGAACTGATAACAAGAAAAAAAAAGTGGAAGGCTTAATGGTCGGAGACTAAAACGAATCAGAAGGTACAGGAAGTCGGAAAGACAGACCGATGATATCAGTCCAGTTTTTCCACCCTGGAGGAGAGCTCCAGCAGTATAACCCAAAGCGTAGCAATATGTTGAATCAAAGTTTGTGGGTAAACCACACCTCCCTTCATACCTATAAATTTATAAAAGAAAAAGGAAAAAAAAAAGAGAGAGAATTAAACAGAGACACATAAAGGCACTAGTCTTACAAATATAGTCTTTTCACATAATCTTGAATCAACAAGGAATCAAGTGGCCATATAATAGTGCCTCACATTAACCATCGCATATCCACATTTTCAAGTCAATTAGCAGTCAGCTTAACCCACCATTTGATTGGCCCTTTGCTTTATGAGTTCCTAATAGAAGCTTAGATACTGTGTACCCCAACAAGCATGTTTTTGAGATCCAAACTGCCCGAGTCTAGTCTAGACTAAGACCGCTACTTAAGTTTGGCTTGTGTAGAGTCAAACTCATTATGTTGTTATCACTAAATTAATTAACAGGAGCATCTAAACAGAAATTTCAAGAGCGAGTAGAATGAGTACCCAAAGAAATGTGACTGCCCCTTGAATTGGCCGCCATTATATGCACCTTCTTGCCTCCTCTTTTCCAACTCAGTTTCAACCATTTGAATAAGCATTTTTTCCGTTTCTATTTTTGCGACCTGACATGTATAATATAGTTAATCAAACTAGGGAATCTAAGGAAAGACTACAACAAAACAAGAAAAAATATTTACTTGGACATTGCCGTGTGGATCTCTTTCAAGCAACAATTGTTCTTGGATTGCTTGTGGGAAAAATTCAAAAAGGTGATAAGATTGAGTTTTAAGTTTCTTTTTCCATAGCCCATCCTCATCTATAATATCATGGGCAAGAATTTCATTGAGTTCTGCAATGAGCTGCTGTACCTGTAGAAAGCAGGTCATAAATGAGTACCAGTTCATGAATGATATGTTGATATTCAGTATCTTAGGCTAGTGGATTATGTGTACTAGCTAAAGAAAGAAACAAAATTAATGATAATAATCATAGCAATACCTCAGGAATAAAGTCAATCAGACCCTCAGGAATAAGAATAACACCATAATTATAGCCAAGTTCGAACCGTTTGCTAATTACATCGACAATGTAGTTTGTAACATTTTTCAAGGTAAGCTTCTTAGCCGCAACCTGCAAAACAAGTCTAAATTAGGTTTCTAG

mRNA sequence

GACCAACAAATTGAATTGGACCTACAAGGAGATCAAAACCAGAATGAACAAGTAAACTCCATTGCTCTTATTTTGGGAGGATTCTTTATACCTGCCATTTTCGTTTCTAATTCCTCAAAAAGGAATAAAGTCAATCAGACCCTCAGGAATAAGAATAACACCATAATTATAGCCAAGTTCGAACCGTTTGCTAATTACATCGACAATGTAGTTTGTAACATTTTTCAAGGTAAGCTTCTTAGCCGCAACCTGCAAAACAAGTCTAAATTAGGTTTCTAG

Coding sequence (CDS)

GACCAACAAATTGAATTGGACCTACAAGGAGATCAAAACCAGAATGAACAAGTAAACTCCATTGCTCTTATTTTGGGAGGATTCTTTATACCTGCCATTTTCGTTTCTAATTCCTCAAAAAGGAATAAAGTCAATCAGACCCTCAGGAATAAGAATAACACCATAATTATAGCCAAGTTCGAACCGTTTGCTAATTACATCGACAATGTAGTTTGTAACATTTTTCAAGGTAAGCTTCTTAGCCGCAACCTGCAAAACAAGTCTAAATTAGGTTTCTAG

Protein sequence

DQQIELDLQGDQNQNEQVNSIALILGGFFIPAIFVSNSSKRNKVNQTLRNKNNTIIIAKFEPFANYIDNVVCNIFQGKLLSRNLQNKSKLGF

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh18G005750.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G005750.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G005750.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G005750.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh18G005750	CmaCh18G005750	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005750.1:exon:319	CmaCh18G005750.1:exon:319	exon
CmaCh18G005750.1:exon:318	CmaCh18G005750.1:exon:318	exon
CmaCh18G005750.1:exon:317	CmaCh18G005750.1:exon:317	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005750.1:cds	CmaCh18G005750.1:cds	CDS
CmaCh18G005750.1:cds	CmaCh18G005750.1:cds_2	CDS
CmaCh18G005750.1:cds	CmaCh18G005750.1:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005750.1	CmaCh18G005750.1-protein	polypeptide