CmaCh17G008510.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh17G008510.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr17: 6606082 .. 6607646 (-)
Sequence length591
RNA-Seq ExpressionCmaCh17G008510.1
SyntenyCmaCh17G008510.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCAAGAGGATTCGGATTCGGATCTTTTCTCTCAATCTGGGAGGAGCGAATCTGTGAATCGATACCATTTTCTTCCACAAATCGTCTATTCACATTGCCGCTACAAGAATCGAACGTAGTCCTCATGAAGAAAACCATTGCGGTGGAAATGGAAACCAGTGCTAAGATCATCAATGGCCATCTCATCTTCGCCATTGTAAGAGTTAAAAAGGGACGTTTCATCATTCGTATCGTAGGTGGTTGATGGAGAAGGTGGGAATTCAACGATTCAACACGCATAAGCTAATCGCAATTCAGCAAAGCCCTCGATTCACTTAACAAATTTGCTTAAGGGCGTGGGAAGATGGAGTGAACAATCGAAGATCTTGCAGGAGGGGAAAGAACCCCATAAATTCAACCAAGTAATATGACAATCTGGAGAATTGAGAAACAAGAAATCCGAGAAAATTCAAGAACTAGAAGGAAGATACCTCAAGCCTCCACTCTGTGACGAGAGTGCAGTAAAGAGAGATTAGTTTGAGCGGAAGAAGAAAGGAAAATCCACAAGAAATTAGTTTAAAATTTGATAAAATTGAATTCTTAAGATTAAAATTTATTAAACTTTATTGGTCAAAATTGATTTTACTGCTAAAGTTAAATTAGTCCCCATTGCCCTCTTGATCTTCCCACAAGAACGTATACGTCCACGGGATGGGGTGGCGATAAGAAGCCTTCACTAAACATCCCCCACGGGATGGGGTGGCGATGAGAAGCCTTCACTATAACCATCTCAGCAAAATTCTCTACTTTATTTTTGTGAGGATTAGGACGTGATTCCAATTAATTTAAGTATTATATATATAATATGTGTTGAAAATATATTTATATTAAGCGTGATGGTGACAGGGCAAGGAATTCGATGGAAACAGGGACGAGTATAGGAAATATAATCTTGTCCCCGACCCTATTTATCTAAAGAATAAAAACTGTTCCTCACTGTCTCCTCCATTACCCGTTTAGGACGAAGTCGTGCAAGTAAAATAAATCGATTTCCAACAAAATCTGGACTTCTTAAACTATAAATTTGCCCATATACCCTTATATACATGTATGTTTAAATTTGTTCTCCTGTGATGAACAAGAGCAGAGTTTCAAACTACAAAATCATGCAACATATTTGAGCTGGTTAGCCTGCATTGATGATGCCTTTCTGGTTCCAAACATGGCAAATCTTGTGCCTCAAGCTCCACTGAACCAACCATTCTGTTGGTACTACTCCCAAACATCCCAAATTCATCACCTTCACAATGCTTCAACTCCAGCGCAAGTGAGACGTCTCCTCCGACCGAGAAGTTAGTCGACTTAATCATGTCGTCGGTAGAACACGAGCGGTAGAGGACTTGCTCGTGCAACTCGTCCCCTCCTCTATCTTCAGAGAATAGTGAATTGTTCCATGATGCTTTGGATGCATTTTCTGGTGAGGATTTGATGTCGGAGTCTCCGAATTCTTCTTTGTACATCTCCTCAACCATCGGTTTCCATAGCCGAACACGCGCGTTTATAAACCAGTTTGCAACCTAA

mRNA sequence

ATGAAATCAAGAGGATTCGGATTCGGATCTTTTCTCTCAATCTGGGAGGAGCGAATCTGTGAATCGATACCATTTTCTTCCACAAATCGTCTATTCACATTGCCGCTACAAGAATCGAACGTAGTCCTCATGAAGAAAACCATTGCGGTGGAAATGGAAACCAGTGCTAAGATCATCAATGGCCATCTCATCTTCGCCATTGTAAGAGTTAAAAAGGGACGTTTCATCATTCGTATCGTAGTTAAATTAGTCCCCATTGCCCTCTTGATCTTCCCACAAGAACCCTGCATTGATGATGCCTTTCTGGTTCCAAACATGGCAAATCTTGTGCCTCAAGCTCCACTGAACCAACCATTCTGTTGGTACTACTCCCAAACATCCCAAATTCATCACCTTCACAATGCTTCAACTCCAGCGCAAGTGAGACGTCTCCTCCGACCGAGAAAGAATAGTGAATTGTTCCATGATGCTTTGGATGCATTTTCTGGTGAGGATTTGATGTCGGAGTCTCCGAATTCTTCTTTGTACATCTCCTCAACCATCGGTTTCCATAGCCGAACACGCGCGTTTATAAACCAGTTTGCAACCTAA

Coding sequence (CDS)

ATGAAATCAAGAGGATTCGGATTCGGATCTTTTCTCTCAATCTGGGAGGAGCGAATCTGTGAATCGATACCATTTTCTTCCACAAATCGTCTATTCACATTGCCGCTACAAGAATCGAACGTAGTCCTCATGAAGAAAACCATTGCGGTGGAAATGGAAACCAGTGCTAAGATCATCAATGGCCATCTCATCTTCGCCATTGTAAGAGTTAAAAAGGGACGTTTCATCATTCGTATCGTAGTTAAATTAGTCCCCATTGCCCTCTTGATCTTCCCACAAGAACCCTGCATTGATGATGCCTTTCTGGTTCCAAACATGGCAAATCTTGTGCCTCAAGCTCCACTGAACCAACCATTCTGTTGGTACTACTCCCAAACATCCCAAATTCATCACCTTCACAATGCTTCAACTCCAGCGCAAGTGAGACGTCTCCTCCGACCGAGAAAGAATAGTGAATTGTTCCATGATGCTTTGGATGCATTTTCTGGTGAGGATTTGATGTCGGAGTCTCCGAATTCTTCTTTGTACATCTCCTCAACCATCGGTTTCCATAGCCGAACACGCGCGTTTATAAACCAGTTTGCAACCTAA

Protein sequence

MKSRGFGFGSFLSIWEERICESIPFSSTNRLFTLPLQESNVVLMKKTIAVEMETSAKIINGHLIFAIVRVKKGRFIIRIVVKLVPIALLIFPQEPCIDDAFLVPNMANLVPQAPLNQPFCWYYSQTSQIHHLHNASTPAQVRRLLRPRKNSELFHDALDAFSGEDLMSESPNSSLYISSTIGFHSRTRAFINQFAT
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh17G008510.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh17G008510.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh17G008510.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh17G008510.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh17G008510CmaCh17G008510gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G008510.1:exon:1256CmaCh17G008510.1:exon:1256exon
CmaCh17G008510.1:exon:1255CmaCh17G008510.1:exon:1255exon
CmaCh17G008510.1:exon:1254CmaCh17G008510.1:exon:1254exon
CmaCh17G008510.1:exon:1253CmaCh17G008510.1:exon:1253exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G008510.1:cdsCmaCh17G008510.1:cds_4CDS
CmaCh17G008510.1:cdsCmaCh17G008510.1:cds_3CDS
CmaCh17G008510.1:cdsCmaCh17G008510.1:cds_2CDS
CmaCh17G008510.1:cdsCmaCh17G008510.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh17G008510.1CmaCh17G008510.1-proteinpolypeptide