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CmaCh16G011160.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGGACAGAGTAATGGCTGTGAATCGGATTTTGTTCTTCTGGAGACCATCCGCCGCCATTTATTGGGAGATTCCGAGCCTTATCGATGTGGGAATTTCGCCGTCGCCGGAGCCGCCGCGCCGGGGTTGTGCGGGAGCTCCAATTTCACCAGCTTGTACCCTTGTTTGACTGAAAATTGGGGGGAATTGCCTCTTAAAGTGGATGATTCCGAGGACATGTTTCTCGCCGGAGTTCTTCACGACGCCGTCCACCTTGGTTGGGATCCTCTGCTCGGCTCATCGCCGTCGGACGCTTTTAATTTTGGGTTCTCTGATGTCAAAACAGAGCCCCTGATTCTTTCTCCGGCGGTGGTTCCGGCGAATGTGGAGGTGGCGGCGGCGACGATGCCGGCGGTGGTACCGGCGAAGGGGAAGCATTATCGAGGTGTACGGCAACGTCCGTGGGGGAAATTCGCGGCGGAGATTCGTGACCCGGCGAAAAACGGGGCTCGGGTTTGGCTTGGGACGTTTGAGACGGCGGAGTATGCGGCGCTTGCTTATGACCGCGCCGCTTATCGGATGCGGGGCTCTAAAGCTCTTCTTAATTTTCCGCTTCGGGTTAATTCGGGTGAACCCGACCCGGTTAGAGTGACGTCGAAGAGGTCGTCGTCTCGGTCTTCGCCGGAGCCTACTTCGTCGTTGTCGTCGGTAGAGAGTGGGACCCCTAAGCGGCGGAAGAAGGTGGTGGCAGCAACTCAAGCTGCAGTACAGTCGATCCAATTAGTGGTGGGGACCAATGCAACACAAGTGGAAGCTGACGTGGCGAAGAGTACAAATGGCGAGCAATGA ATGTACGGACAGAGTAATGGCTGTGAATCGGATTTTGTTCTTCTGGAGACCATCCGCCGCCATTTATTGGGAGATTCCGAGCCTTATCGATGTGGGAATTTCGCCGTCGCCGGAGCCGCCGCGCCGGGGTTGTGCGGGAGCTCCAATTTCACCAGCTTGTACCCTTGTTTGACTGAAAATTGGGGGGAATTGCCTCTTAAAGTGGATGATTCCGAGGACATGTTTCTCGCCGGAGTTCTTCACGACGCCGTCCACCTTGGTTGGGATCCTCTGCTCGGCTCATCGCCGTCGGACGCTTTTAATTTTGGGTTCTCTGATGTCAAAACAGAGCCCCTGATTCTTTCTCCGGCGGTGGTTCCGGCGAATGTGGAGGTGGCGGCGGCGACGATGCCGGCGGTGGTACCGGCGAAGGGGAAGCATTATCGAGGTGTACGGCAACGTCCGTGGGGGAAATTCGCGGCGGAGATTCGTGACCCGGCGAAAAACGGGGCTCGGGTTTGGCTTGGGACGTTTGAGACGGCGGAGTATGCGGCGCTTGCTTATGACCGCGCCGCTTATCGGATGCGGGGCTCTAAAGCTCTTCTTAATTTTCCGCTTCGGGTTAATTCGGGTGAACCCGACCCGGTTAGAGTGACGTCGAAGAGGTCGTCGTCTCGGTCTTCGCCGGAGCCTACTTCGTCGTTGTCGTCGGTAGAGAGTGGGACCCCTAAGCGGCGGAAGAAGGTGGTGGCAGCAACTCAAGCTGCAGTACAGTCGATCCAATTAGTGGTGGGGACCAATGCAACACAAGTGGAAGCTGACGTGGCGAAGAGTACAAATGGCGAGCAATGA ATGTACGGACAGAGTAATGGCTGTGAATCGGATTTTGTTCTTCTGGAGACCATCCGCCGCCATTTATTGGGAGATTCCGAGCCTTATCGATGTGGGAATTTCGCCGTCGCCGGAGCCGCCGCGCCGGGGTTGTGCGGGAGCTCCAATTTCACCAGCTTGTACCCTTGTTTGACTGAAAATTGGGGGGAATTGCCTCTTAAAGTGGATGATTCCGAGGACATGTTTCTCGCCGGAGTTCTTCACGACGCCGTCCACCTTGGTTGGGATCCTCTGCTCGGCTCATCGCCGTCGGACGCTTTTAATTTTGGGTTCTCTGATGTCAAAACAGAGCCCCTGATTCTTTCTCCGGCGGTGGTTCCGGCGAATGTGGAGGTGGCGGCGGCGACGATGCCGGCGGTGGTACCGGCGAAGGGGAAGCATTATCGAGGTGTACGGCAACGTCCGTGGGGGAAATTCGCGGCGGAGATTCGTGACCCGGCGAAAAACGGGGCTCGGGTTTGGCTTGGGACGTTTGAGACGGCGGAGTATGCGGCGCTTGCTTATGACCGCGCCGCTTATCGGATGCGGGGCTCTAAAGCTCTTCTTAATTTTCCGCTTCGGGTTAATTCGGGTGAACCCGACCCGGTTAGAGTGACGTCGAAGAGGTCGTCGTCTCGGTCTTCGCCGGAGCCTACTTCGTCGTTGTCGTCGGTAGAGAGTGGGACCCCTAAGCGGCGGAAGAAGGTGGTGGCAGCAACTCAAGCTGCAGTACAGTCGATCCAATTAGTGGTGGGGACCAATGCAACACAAGTGGAAGCTGACGTGGCGAAGAGTACAAATGGCGAGCAATGA MYGQSNGCESDFVLLETIRRHLLGDSEPYRCGNFAVAGAAAPGLCGSSNFTSLYPCLTENWGELPLKVDDSEDMFLAGVLHDAVHLGWDPLLGSSPSDAFNFGFSDVKTEPLILSPAVVPANVEVAAATMPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEYAALAYDRAAYRMRGSKALLNFPLRVNSGEPDPVRVTSKRSSSRSSPEPTSSLSSVESGTPKRRKKVVAATQAAVQSIQLVVGTNATQVEADVAKSTNGEQ Homology
BLAST of CmaCh16G011160.1 vs. ExPASy Swiss-Prot
Match: O80337 (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2) HSP 1 Score: 260.8 bits (665), Expect = 1.8e-68 Identity = 140/244 (57.38%), Postives = 168/244 (68.85%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. ExPASy Swiss-Prot
Match: Q40479 (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.0e-59 Identity = 133/235 (56.60%), Postives = 165/235 (70.21%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. ExPASy Swiss-Prot
Match: O80338 (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=ERF2 PE=2 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-57 Identity = 142/251 (56.57%), Postives = 159/251 (63.35%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. ExPASy Swiss-Prot
Match: Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-57 Identity = 131/235 (55.74%), Postives = 158/235 (67.23%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. ExPASy Swiss-Prot
Match: Q84XB3 (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ERF1 PE=2 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56 Identity = 125/218 (57.34%), Postives = 149/218 (68.35%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 ) HSP 1 Score: 260.8 bits (665), Expect = 1.3e-69 Identity = 140/244 (57.38%), Postives = 168/244 (68.85%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 ) HSP 1 Score: 224.6 bits (571), Expect = 1.0e-58 Identity = 142/251 (56.57%), Postives = 159/251 (63.35%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 ) HSP 1 Score: 148.7 bits (374), Expect = 7.0e-36 Identity = 86/172 (50.00%), Postives = 105/172 (61.05%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. TAIR 10
Match: AT5G47230.1 (ethylene responsive element binding factor 5 ) HSP 1 Score: 113.2 bits (282), Expect = 3.3e-25 Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 0
BLAST of CmaCh16G011160.1 vs. TAIR 10
Match: AT4G17490.1 (ethylene responsive element binding factor 6 ) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24 Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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