CmaCh14G020010.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G020010.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CRS2-associated factor 1, mitochondrial
Location	Cma_Chr14: 14039978 .. 14042732 (-)
Sequence length	1742
RNA-Seq Expression	CmaCh14G020010.1
Synteny	CmaCh14G020010.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTAAACCGACTTCGCCGATAAACCCTAAACCCTTTCCCGGTCGCGCGACATTGTTCATCCATGCGCAATCTACCTCATGTTCGTTATCAGACTCTTCCGCCAGGATCCAATTCCGTTTGCTCATCCTCATACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCCCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCACGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTCGATTTCCAGTACAGTTACACGGAGACTAGCCGCTTGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGCGAGCTCTTTAGAGAGCATGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGAGAGCCACTGACAGGAGCCGAGAGAAAGGCTTTGGTGGAAACGTGTCAAAAGAAGAAAACAAAGAGGCAGATTAATTTGGGTATGTGATACCAAGTTCTATTAATCTATTATTTGCACATATAAAATTGTTGATATTGGACGGTGTTTTCTCATCATTTCTAATTGATAGATGCTTCATGGATATTGAGATTATCTCATTTTCTGTGCTTAAATTGCTGAGGAATCTTATAAGACGATCACTATATTGAACGGTTCCGTTGGAATAATTGCATTTTCTTCTAACTATGTAACTTCTATGCGTTCGTAGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCCGAAGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGTATGGGTTTCATTTCTTTGGGTGGAGTTTTAGGCAAATGTTTTAATTCTTCATTTCTTAACCTATTGAGATTGTTCCACAAATTACATTCATCGTATTGAAAATGTATTTTGAGTCACACCCACCTGTTCGTGTACGTTTAATTCGAGGTTTGTCCATGCCTGCAGGAGAAAACCTTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATCTATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTTGTATGTGTTTGATAACTTTTTTTTAAAGCTTGTTTCGTGTAATATTACCATCCCATCATAAAGTCGGTTGACTAACGCATCATGCCTGTGGATTTTAGCAAAAAATGGTTACTACGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTCCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGTAATGGTCGTTTCCCTCATGCCTTTACATAACTATTCTTAAATTTCTTAAATCATAGAAAGAAAGGAAGAAGGACCCTTACCATGCCAGGAGTGTTGTTCTTCATGTGTACCTTGATGCAAGGGGGAATGGTGTGGACTGTTTAGACAATTCCAAAGGAATTTTATGTTTTACAGAAGAATTATTTCTTGTGGGGGGGTGGGGTGTCTTCTGTTATTCAAACGCCTCAATAAGTTCCATGGTGGGCAAACAGAGTAAATTGAAACTTGGAAGAGTACATAGCCTTACTTTAGGTTCTTAGTGGGCTTTAAGTCCTAAGATTTTTGTTTCGTGGGATCTTGCATTGGCGTTCAAATTTGTTTATTGTGCCAAAATTTGAATTCTTTTCATTTTCGATCAACTATCCTTCTTAAATCAGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGGGGCAAGGATTACCAGCCTTCAGAATCGGAATGTTTTCTTTCAGTCAGAGAGTCATTTGATGATTTTGATGGCAATACGAAGTGTGTCGACAGTGACGACGACGAGGACGATGAAAATTTTGACAACAATTGCTGCGATGCAGGCTTTCAATCTGGTAATAATGACTAGTCCCTTGGTTGCTTGAATCATTGTACCAAAACATCATGATCTTTTGAGCCTGTAATTTGGTTTTTAAGGCTACATATTAATATTGCAGCTGCAAAGCAAAATCCCAAGGACTGATGATTCGAATGCACTATGCTGTAGATTGACCCATATTGTTTGTTCATATCATTTATTTCCTCATTCTTCTGTTCTCCCATGAAGAAGGGAGTGAAAATTCTGTAGAGCGTAGAGGTTTGAACTTTTAACTTTCTTTTTGACAATGGTGTATACTTTAGCTAGCGGAACTATGTTCATGTTGAGTTGTTCTACGCCTATATTGGCTTATCAAATTTTTGTTATCGCAACCCACGAGTCTTAACTTCCCTCTAACGACTTATTTTCTTCCCTTTTTTGTTCTGGTTTGACAACGAAAATGTTGTGATGTTCTTCTCTTGTAGTCAGGTCCAGTCTATAGACGATTATTGCTCTCTTTTTCAGTGCATTCTGTTGTTATTCTACTCGAAGAAAGCTGCACATGACGG

mRNA sequence

GTCTAAACCGACTTCGCCGATAAACCCTAAACCCTTTCCCGGTCGCGCGACATTGTTCATCCATGCGCAATCTACCTCATGTTCGTTATCAGACTCTTCCGCCAGGATCCAATTCCGTTTGCTCATCCTCATACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCCCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCACGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTCGATTTCCAGTACAGTTACACGGAGACTAGCCGCTTGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGCGAGCTCTTTAGAGAGCATGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGAGAGCCACTGACAGGAGCCGAGAGAAAGGCTTTGGTGGAAACGTGTCAAAAGAAGAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCCGAAGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGAGAAAACCTTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATCTATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTTCAAAAAATGGTTACTACGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTCCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGGGGCAAGGATTACCAGCCTTCAGAATCGGAATGTTTTCTTTCAGTCAGAGAGTCATTTGATGATTTTGATGGCAATACGAAGTGTGTCGACAGTGACGACGACGAGGACGATGAAAATTTTGACAACAATTGCTGCGATGCAGGCTTTCAATCTGCTGCAAAGCAAAATCCCAAGGACTGATGATTCGAATGCACTATGCTGTAGATTGACCCATATTGTTTGTTCATATCATTTATTTCCTCATTCTTCTGTTCTCCCATGAAGAAGGGAGTGAAAATTCTGTAGAGCGTAGAGGTTTGAACTTTTAACTTTCTTTTTGACAATGGTGTATACTTTAGCTAGCGGAACTATGTTCATGTTGAGTTGTTCTACGCCTATATTGGCTTATCAAATTTTTGTTATCGCAACCCACGAGTCTTAACTTCCCTCTAACGACTTATTTTCTTCCCTTTTTTGTTCTGGTTTGACAACGAAAATGTTGTGATGTTCTTCTCTTGTAGTCAGGTCCAGTCTATAGACGATTATTGCTCTCTTTTTCAGTGCATTCTGTTGTTATTCTACTCGAAGAAAGCTGCACATGACGG

Coding sequence (CDS)

ATGTTCGTTATCAGACTCTTCCGCCAGGATCCAATTCCGTTTGCTCATCCTCATACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCCCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCACGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTCGATTTCCAGTACAGTTACACGGAGACTAGCCGCTTGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGCGAGCTCTTTAGAGAGCATGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGAGAGCCACTGACAGGAGCCGAGAGAAAGGCTTTGGTGGAAACGTGTCAAAAGAAGAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCCGAAGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGAGAAAACCTTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATCTATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTTCAAAAAATGGTTACTACGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTCCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGGGGCAAGGATTACCAGCCTTCAGAATCGGAATGTTTTCTTTCAGTCAGAGAGTCATTTGATGATTTTGATGGCAATACGAAGTGTGTCGACAGTGACGACGACGAGGACGATGAAAATTTTGACAACAATTGCTGCGATGCAGGCTTTCAATCTGCTGCAAAGCAAAATCCCAAGGACTGA

Protein sequence

MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQSAAKQNPKD

Homology

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BLAST of CmaCh14G020010.1 vs. ExPASy Swiss-Prot
Match: Q8VYD9 (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 6.3e-150
Identity = 274/410 (66.83%), Postives = 316/410 (77.07%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFA------HPHTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R +P  F       H  T S+     S+LRD Y F+SPP LS    + P    
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSSSASENPDFNQ 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGP 120
           K    K  KP+Y+PPSSL+    K  HSDLPFDF++SYTE+   VRPIGLREPK+SPFGP
Sbjct: 61  KNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQK 180
            RLDR+WTGVCAPAV+PK  S++ +EDPKLEEKRR + E IQG  LT AERK LVE CQ+
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE+KTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLA 300
            +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSIDETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

Query: 301 VPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360
           VPALT+L+KNGYYGSLVPMVRDAFL  ELVRIDC GLE+ DYKKIG KLRDLVPCILVTF
Sbjct: 301 VPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTF 360

Query: 361 EKEQIVVWRGKDYQPSESECFLSV---RESFDDFDGNTKCVDSDDDEDDE 399
           +KEQ+V+WRGKDY+P + +   S    RES  D D +  C     D  DE
Sbjct: 361 DKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVDLSCSRGAQDSPDE 403

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BLAST of CmaCh14G020010.1 vs. ExPASy Swiss-Prot
Match: Q6Z4U2 (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 4.1e-133
Identity = 237/354 (66.95%), Postives = 278/354 (78.53%), Query Frame = 0


Query: 17  PHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLADKKP 76
           P  PS R    S L D Y F  P SL+P     +   ++ +P KP Y+PPSSLD   +  
Sbjct: 14  PRRPSVRRL--SGLLDRYGFVPPASLTPHSASDDGGAKKRRPKKPPYRPPSSLDRGGRPA 73

Query: 77  KHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVDPKASSLESM 136
             SDLPFDF++SYTE+S   +PIGLREPK+SPFGPGRLDR WTG+CAPAVD       + 
Sbjct: 74  ARSDLPFDFRFSYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLRDAHA- 133

Query: 137 EDP------KLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINLGRDGLTHNML 196
           +DP      +LEE RR   E + GEPLT AER  LV  CQK +TK+QINLGRDGLTHNML
Sbjct: 134 DDPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNML 193

Query: 197 NDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKK 256
           NDI+NHWK+ EAVR+KCLGVPTVDM+NVC QLE+KT G IIHRHGG L+LYRGR+YNPKK
Sbjct: 194 NDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKK 253

Query: 257 RPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSKNGYYGSLVPM 316
           RP IPLMLW+P EP+YPRLIKTTI+GL+++ETKEMRKKGL VP LT+L+KNGYY SLVPM
Sbjct: 254 RPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPM 313

Query: 317 VRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDY 365
           VRDAFL+ ELVRID +GL KSDY+KIG KLRDLVPCI+V+F+KEQI+VWRGKDY
Sbjct: 314 VRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY 364

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BLAST of CmaCh14G020010.1 vs. ExPASy Swiss-Prot
Match: Q9FFU1 (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 7.8e-92
Identity = 178/334 (53.29%), Postives = 227/334 (67.96%), Query Frame = 0


Query: 32  DHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLAD--KKPKHSDLPFDFQYSY 91
           D Y     P   P  PP E K ++ K      K   S +L +  K P  SDLPFDF+YSY
Sbjct: 32  DDYDPPFSPLSKPTKPPKEKKKQKTK------KQDQSSELVNDLKIPVISDLPFDFRYSY 91

Query: 92  TETSRLVRPIGLREPK-FSPFGPGRLDRKWTGVCAPAVDPKASSLESMEDPKLEEKRRVM 151
           +ET+  + PIG REPK FSPFGPGRLDRKWTG  A A      S E  +   +EE+ RV+
Sbjct: 92  SETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALA------SPEIDQSQWVEERARVL 151

Query: 152 WENIQGEPLTGAERKALVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCL 211
                GE LT  E   L+E  +     RQINLG+ G+THNM++DI+NHWK AEAVRIKCL
Sbjct: 152 -----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCL 211

Query: 212 GVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 271
           GVPT+DM N+C  LEEK+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPR
Sbjct: 212 GVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPR 271

Query: 272 LIKTTIDGLSIDETKEMRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGL 331
           L+K   DGL  +ETKEMR +GL  PAL +L++NG Y ++V  VR+ F + E+VR+DC  +
Sbjct: 272 LVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHV 331

Query: 332 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 363
             SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 332 GMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

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BLAST of CmaCh14G020010.1 vs. ExPASy Swiss-Prot
Match: Q0J7J7 (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 326.2 bits (835), Expect = 5.3e-88
Identity = 167/331 (50.45%), Postives = 216/331 (65.26%), Query Frame = 0


Query: 38  SPPSLSPKPPPP-----ELKPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTET 97
           +PP   P   PP     E  PR     K + +      +   +P  SDLPFDF+YSY+ET
Sbjct: 31  APPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDFRYSYSET 90

Query: 98  SRLVRPIGLREP-KFSPFGPGRLDRKWTGVCAPAVDPKASSLESMEDPKLEEKRRVMWEN 157
               RPIG REP +FSPFGPGRLDR W GV A A   + +   +              E 
Sbjct: 91  DPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGAGAAATSR-----------EE 150

Query: 158 IQGEPLTGAERKALVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVP 217
           + GEPL   E   LVE  +     RQINLG+ G+THNM++DI+NHWK AEAVRIKCLGVP
Sbjct: 151 VLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVP 210

Query: 218 TVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 277
           T+DM N+C  LE+KT GK+I+R+   L+LYRGRNY+PK+RP IPLMLW+P  PIYPRL++
Sbjct: 211 TLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPIYPRLVQ 270

Query: 278 TTIDGLSIDETKEMRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKS 337
              DGL+ ++TKE+R  GL    L +L++NG Y ++V  VR+AF + E+VR+DC  +  S
Sbjct: 271 NVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSS 330

Query: 338 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 363
           D KKIG KLRDLVPC+ + F+ EQI++WRGK
Sbjct: 331 DCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350

[Close]

BLAST of CmaCh14G020010.1 vs. ExPASy Swiss-Prot
Match: Q5VMQ5 (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0495900 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 4.8e-81
Identity = 154/309 (49.84%), Postives = 197/309 (63.75%), Query Frame = 0


Query: 82  PFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG-----------------VCAP 141
           PF+FQYSYTET R  RP+ LRE  F PFGP    R WTG                 +  P
Sbjct: 91  PFEFQYSYTETPR-ARPVALREAPFLPFGPEVTPRPWTGRKPLPKSRKELPEFDSFMLPP 150

Query: 142 AVDPKASSLESM------EDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQI 201
                   ++S        +P+ +   R   E + GEPLT  E   LV+     KTKRQ+
Sbjct: 151 PGKKGVKPVQSPGPFLAGTEPRYQAASR---EEVLGEPLTKEEVDELVKA--TLKTKRQL 210

Query: 202 NLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFL 261
           N+GRDGLTHNML +I++HWK     +IKC GV TVDM NVC QLEEK  GK+IH  GG +
Sbjct: 211 NIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVI 270

Query: 262 VLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRL 321
            L+RGRNYN + RP  PLMLW+P  P+YPRL+K   DGL+ DE ++MRK+G  +P + +L
Sbjct: 271 FLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKL 330

Query: 322 SKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVV 368
            KNG Y +LV  VR+AF +C+LVR+DC GL KSD +KIG KL+DLVPC L++FE E I++
Sbjct: 331 GKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILM 390

[Close]

BLAST of CmaCh14G020010.1 vs. ExPASy TrEMBL
Match: A0A6J1IVX0 (CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479719 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 2.5e-250
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQSAAKQNPKD 420
           GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQSAAKQNPKD
Sbjct: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQSAAKQNPKD 419

[Close]

BLAST of CmaCh14G020010.1 vs. ExPASy TrEMBL
Match: A0A6J1E8W9 (CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431873 PE=4 SV=1)

HSP 1 Score: 815.1 bits (2104), Expect = 1.4e-232
Identity = 390/411 (94.89%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAVDPK SSLES EDPKLEEKRRVMWENIQGEPLTGAERK LVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGRNYNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQS 412
           GKDYQPSESECFL+VRESFDD DGNT CVD+DD  D++NFD+ C D+GFQS
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDD--DNQNFDDECSDSGFQS 409

[Close]

BLAST of CmaCh14G020010.1 vs. ExPASy TrEMBL
Match: A0A6J1D1H4 (CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016410 PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 4.2e-205
Identity = 358/408 (87.75%), Postives = 373/408 (91.42%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRL RQ PI FA P T  NRCFCYSKLRDHYAFESPPSLSPKPP PE KPR NKP K
Sbjct: 1   MFVIRLLRQKPILFAPPLTSFNRCFCYSKLRDHYAFESPPSLSPKPPAPEPKPRPNKPPK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
            RYKPPSSLDLADKKP+HSDLPFDFQYSYTETS  VRPIGLREPK+SPFGPGRLDRKW+G
Sbjct: 61  QRYKPPSSLDLADKKPRHSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWSG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAVDPKASS+E MEDPKLEEKRR M ENIQGEPLTGAERKALVE CQKKKTKRQINL
Sbjct: 121 VCAPAVDPKASSVEGMEDPKLEEKRRFMRENIQGEPLTGAERKALVEKCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGRNY  KKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALT+L+K
Sbjct: 241 YRGRNYITKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTKLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDD--FDGNTKCVDSDDDEDDENFDNNCCD 407
           G DY+P +S CFL+VR SFDD   +GNT  V  DDD+DD  FD++  D
Sbjct: 361 GNDYKPLDSGCFLTVRGSFDDDEANGNTNRVGEDDDDDD--FDDDYSD 406

[Close]

BLAST of CmaCh14G020010.1 vs. ExPASy TrEMBL
Match: A0A6J1EES7 (CRS2-associated factor 1, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431873 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.2e-198
Identity = 333/348 (95.69%), Postives = 340/348 (97.70%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAVDPK SSLES EDPKLEEKRRVMWENIQGEPLTGAERK LVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGRNYNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCIL 349
           NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLR +V  ++
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRVMVVSLM 348

[Close]

BLAST of CmaCh14G020010.1 vs. ExPASy TrEMBL
Match: A0A5D3D3D7 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004260 PE=4 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 7.6e-191
Identity = 332/391 (84.91%), Postives = 354/391 (90.54%), Query Frame = 0


Query: 1   MFVIR-LFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60
           MFVIR + R+  IP   PHT  N C  YSKLR+ YAFE P S+SP PP P  KPR NKP 
Sbjct: 1   MFVIRTISREKSIP--RPHTSFNPCSFYSKLRELYAFEFPSSVSPSPPEP--KPRSNKPP 60

Query: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWT 120
           KPRYKPPSSLDL DKKP+ S+LPFDFQYSYTETS  VRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQIN 180
           GVCAPAVDPKA+S+E MEDP+LEEKRRVM EN+QGEPLTGAERKALVE CQK KTKRQIN
Sbjct: 121 GVCAPAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQIN 180

Query: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLV 240
           LGRDGLTHNMLNDI+NHWKH EAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGG LV
Sbjct: 181 LGRDGLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGLLV 240

Query: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLS 300
           LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALT+L+
Sbjct: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLA 300

Query: 301 KNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVW 360
           KNGYYGSLVPMVRDAFLSCELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTF+KEQIVVW
Sbjct: 301 KNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVW 360

Query: 361 RGKDYQPSESECFLSVRESFDDFDGNTKCVD 391
           RGKDYQP +   +L+VRE+FDD DGNT CVD
Sbjct: 361 RGKDYQPLDIG-YLTVRETFDDVDGNTGCVD 386

[Close]

BLAST of CmaCh14G020010.1 vs. NCBI nr
Match: XP_022980305.1 (CRS2-associated factor 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 874.0 bits (2257), Expect = 5.2e-250
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQSAAKQNPKD 420
           GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQSAAKQNPKD
Sbjct: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQSAAKQNPKD 419

[Close]

BLAST of CmaCh14G020010.1 vs. NCBI nr
Match: XP_022924354.1 (CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 815.1 bits (2104), Expect = 2.8e-232
Identity = 390/411 (94.89%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAVDPK SSLES EDPKLEEKRRVMWENIQGEPLTGAERK LVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGRNYNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQS 412
           GKDYQPSESECFL+VRESFDD DGNT CVD+DD  D++NFD+ C D+GFQS
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDD--DNQNFDDECSDSGFQS 409

[Close]

BLAST of CmaCh14G020010.1 vs. NCBI nr
Match: XP_023526250.1 (CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 812.0 bits (2096), Expect = 2.4e-231
Identity = 391/411 (95.13%), Postives = 398/411 (96.84%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAVDPK SSLES EDPKLEEKRRVMWENIQGEPLTGAERK LVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQS 412
           GKDYQPSESECFL+VRESFDD DGNT CVD+DD  D+ENFD+ C DAGFQS
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDD--DNENFDDECSDAGFQS 409

[Close]

BLAST of CmaCh14G020010.1 vs. NCBI nr
Match: KAG7018963.1 (CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 802.7 bits (2072), Expect = 1.5e-228
Identity = 384/411 (93.43%), Postives = 395/411 (96.11%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAV+PK SSLES EDPKLEEKRRVMWENIQGEPLTGAERKALVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQS 412
           GKDY+PSESECFL+VRESFDD DGNT CV      D+ENFD+ C DAGFQS
Sbjct: 361 GKDYRPSESECFLTVRESFDDVDGNTNCV------DNENFDDECSDAGFQS 405

[Close]

BLAST of CmaCh14G020010.1 vs. NCBI nr
Match: KAG6582581.1 (CRS2-associated factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 801.2 bits (2068), Expect = 4.2e-228
Identity = 383/411 (93.19%), Postives = 395/411 (96.11%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180
           VCAPAV+PK SSLES EDPKLEEKRRVMWENIQGEPLTGAERKALVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDI+NHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIFNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQS 412
           GKDY+PSESECFL+VRESFDD DGNT CV      D+ENFD+ C DAGFQS
Sbjct: 361 GKDYRPSESECFLTVRESFDDVDGNTNCV------DNENFDDECSDAGFQS 405

[Close]

BLAST of CmaCh14G020010.1 vs. TAIR 10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 531.9 bits (1369), Expect = 4.5e-151
Identity = 274/410 (66.83%), Postives = 316/410 (77.07%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFA------HPHTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R +P  F       H  T S+     S+LRD Y F+SPP LS    + P    
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSSSASENPDFNQ 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGP 120
           K    K  KP+Y+PPSSL+    K  HSDLPFDF++SYTE+   VRPIGLREPK+SPFGP
Sbjct: 61  KNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQK 180
            RLDR+WTGVCAPAV+PK  S++ +EDPKLEEKRR + E IQG  LT AERK LVE CQ+
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE+KTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLA 300
            +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSIDETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

Query: 301 VPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360
           VPALT+L+KNGYYGSLVPMVRDAFL  ELVRIDC GLE+ DYKKIG KLRDLVPCILVTF
Sbjct: 301 VPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTF 360

Query: 361 EKEQIVVWRGKDYQPSESECFLSV---RESFDDFDGNTKCVDSDDDEDDE 399
           +KEQ+V+WRGKDY+P + +   S    RES  D D +  C     D  DE
Sbjct: 361 DKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVDLSCSRGAQDSPDE 403

[Close]

BLAST of CmaCh14G020010.1 vs. TAIR 10
Match: AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 406.4 bits (1043), Expect = 2.8e-113
Identity = 207/307 (67.43%), Postives = 240/307 (78.18%), Query Frame = 0


Query: 1   MFVIRLFRQDPIPFA------HPHTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R +P  F       H  T S+     S+LRD Y F+SPP LS    + P    
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSSSASENPDFNQ 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGP 120
           K    K  KP+Y+PPSSL+    K  HSDLPFDF++SYTE+   VRPIGLREPK+SPFGP
Sbjct: 61  KNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQK 180
            RLDR+WTGVCAPAV+PK  S++ +EDPKLEEKRR + E IQG  LT AERK LVE CQ+
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE+KTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLA 299
            +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSIDETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

[Close]

BLAST of CmaCh14G020010.1 vs. TAIR 10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 339.0 bits (868), Expect = 5.6e-93
Identity = 178/334 (53.29%), Postives = 227/334 (67.96%), Query Frame = 0


Query: 32  DHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLAD--KKPKHSDLPFDFQYSY 91
           D Y     P   P  PP E K ++ K      K   S +L +  K P  SDLPFDF+YSY
Sbjct: 32  DDYDPPFSPLSKPTKPPKEKKKQKTK------KQDQSSELVNDLKIPVISDLPFDFRYSY 91

Query: 92  TETSRLVRPIGLREPK-FSPFGPGRLDRKWTGVCAPAVDPKASSLESMEDPKLEEKRRVM 151
           +ET+  + PIG REPK FSPFGPGRLDRKWTG  A A      S E  +   +EE+ RV+
Sbjct: 92  SETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALA------SPEIDQSQWVEERARVL 151

Query: 152 WENIQGEPLTGAERKALVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCL 211
                GE LT  E   L+E  +     RQINLG+ G+THNM++DI+NHWK AEAVRIKCL
Sbjct: 152 -----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCL 211

Query: 212 GVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 271
           GVPT+DM N+C  LEEK+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPR
Sbjct: 212 GVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPR 271

Query: 272 LIKTTIDGLSIDETKEMRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGL 331
           L+K   DGL  +ETKEMR +GL  PAL +L++NG Y ++V  VR+ F + E+VR+DC  +
Sbjct: 272 LVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHV 331

Query: 332 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 363
             SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 332 GMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]

BLAST of CmaCh14G020010.1 vs. TAIR 10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 298.9 bits (764), Expect = 6.4e-81
Identity = 169/386 (43.78%), Postives = 227/386 (58.81%), Query Frame = 0


Query: 18  HTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNK----PLKPRYKP--PSSLDL 77
           HT  +           +     PSL      P  + + +K    P +P+ KP  P S   
Sbjct: 69  HTHDSEAAAAEPKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQ 128

Query: 78  ADKKPK-----------HSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 137
            D KP+            +  PF+F+YSYTET + V+P+ LREP ++PFGP  + R WTG
Sbjct: 129 LDAKPEVKLSEDGLTYVINGAPFEFKYSYTETPK-VKPLKLREPAYAPFGPTTMGRPWTG 188

Query: 138 -VCAPAVDPKASSLESMEDPKLEEK----------------RRVMW--ENIQGEPLTGAE 197
               P         +S   P + +K                 R ++  E I GEPLT  E
Sbjct: 189 RAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEE 248

Query: 198 RKALVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQ 257
            + LV +C   KT RQ+N+GRDGLTHNMLN+I++ WK     +IKC GV TVDM NVC Q
Sbjct: 249 VRELVTSC--LKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQ 308

Query: 258 LEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDE 317
           LEEK  GK+I+R GG L L+RGRNYN + RP  PLMLW+P  P+YPRLI+   +GL+  E
Sbjct: 309 LEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQE 368

Query: 318 TKEMRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLR 368
              MR+KG  +  + +L KNG Y  LV  V++AF  CELVRIDCQG++ SD++KIG KL+
Sbjct: 369 ATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLK 428

[Close]

BLAST of CmaCh14G020010.1 vs. TAIR 10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 4.0e-75
Identity = 160/381 (41.99%), Postives = 221/381 (58.01%), Query Frame = 0


Query: 11  PIPFAHPHTPSNRCFCYSKLRDHYAFESP--PSLSPKPPPPELKPRQNKPLKP---RYKP 70
           PIP    + PSNR    ++  +H    +P  P  +P    P  + R  KP+K        
Sbjct: 35  PIPIP-KYAPSNR--NRNQKTNHQTDTNPKKPQSNPALKLPHHRTRYYKPVKEGVISSDG 94

Query: 71  PSSLDLADKKPKHS--DLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTGVCA 130
             ++ + D    +     PF+FQ+SY+ET + V+P+G+REP F PF P  + R WTG   
Sbjct: 95  DRTILIGDSGVSYQLPGAPFEFQFSYSETPK-VKPVGIREPAFMPFAPPTMPRPWTGKAP 154

Query: 131 PAVDPKASSLESMEDPKLEEKRRVMW-------------------ENIQGEPLTGAERKA 190
                K   L    +P    K  V +                   E + GEPL   E+  
Sbjct: 155 LKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGM 214

Query: 191 LVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEE 250
           L++        RQ+NLGRDG THNML  I++HWK     +++C GVPTVDM NVC  LEE
Sbjct: 215 LIK--PHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEE 274

Query: 251 KTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKE 310
           KT G+IIHR GG + L+RGRNYN + RP  PLMLW+P  P+YP+LI+   +GL+ +E  E
Sbjct: 275 KTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHE 334

Query: 311 MRKKGLAVPALTRLSKNGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLV 366
            R KG ++  + +LSKNG Y SLV  VRDAF    LV++DC GLE SDYKKIG KL++LV
Sbjct: 335 FRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELV 394

The following BLAST results are available for this feature:

BLAST of CmaCh14G020010.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD9	6.3e-150	66.83	CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g3...	[more]
Q6Z4U2	4.1e-133	66.95	CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FFU1	7.8e-92	53.29	CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g5...	[more]
Q0J7J7	5.3e-88	50.45	CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q5VMQ5	4.8e-81	49.84	CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of CmaCh14G020010.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IVX0	2.5e-250	100.00	CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479...	[more]
A0A6J1E8W9	1.4e-232	94.89	CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1D1H4	4.2e-205	87.75	CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1EES7	2.2e-198	95.69	CRS2-associated factor 1, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A5D3D3D7	7.6e-191	84.91	CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CmaCh14G020010.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980305.1	5.2e-250	100.00	CRS2-associated factor 1, mitochondrial [Cucurbita maxima]	[more]
XP_022924354.1	2.8e-232	94.89	CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_023526250.1	2.4e-231	95.13	CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG7018963.1	1.5e-228	93.43	CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6582581.1	4.2e-228	93.19	CRS2-associated factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of CmaCh14G020010.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31010.1	4.5e-151	66.83	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT4G31010.2	2.8e-113	67.43	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT5G54890.1	5.6e-93	53.29	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT2G20020.1	6.4e-81	43.78	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT1G23400.1	4.0e-75	41.99	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 277..360 e-value: 2.1E-10 score: 50.6 coord: 157..242 e-value: 2.7E-19 score: 80.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 157..242 e-value: 6.4E-20 score: 71.1 coord: 280..360 e-value: 6.2E-9 score: 35.9
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 155..253 score: 19.261976
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 275..371 score: 16.820599
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 156..253 e-value: 5.2E-23 score: 82.9
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 277..371 e-value: 2.8E-12 score: 48.5
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 277..366
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 156..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..54
None	No IPR available	PANTHER	PTHR46247:SF2	CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL	coord: 24..398
IPR044599	CRS2-associated factor, plant	PANTHER	PTHR46247	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	coord: 24..398

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G020010	CmaCh14G020010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G020010.1:exon:1912	CmaCh14G020010.1:exon:1912	exon
CmaCh14G020010.1:exon:1911	CmaCh14G020010.1:exon:1911	exon
CmaCh14G020010.1:exon:1910	CmaCh14G020010.1:exon:1910	exon
CmaCh14G020010.1:exon:1909	CmaCh14G020010.1:exon:1909	exon
CmaCh14G020010.1:exon:1908	CmaCh14G020010.1:exon:1908	exon
CmaCh14G020010.1:exon:1907	CmaCh14G020010.1:exon:1907	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G020010.1:three_prime_utr	CmaCh14G020010.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G020010.1:cds	CmaCh14G020010.1:cds_6	CDS
CmaCh14G020010.1:cds	CmaCh14G020010.1:cds_5	CDS
CmaCh14G020010.1:cds	CmaCh14G020010.1:cds_4	CDS
CmaCh14G020010.1:cds	CmaCh14G020010.1:cds_3	CDS
CmaCh14G020010.1:cds	CmaCh14G020010.1:cds_2	CDS
CmaCh14G020010.1:cds	CmaCh14G020010.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G020010.1:five_prime_utr	CmaCh14G020010.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G020010.1	CmaCh14G020010.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003723	RNA binding