CmaCh14G008520.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G008520.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	leucine-rich repeat extensin-like protein 3
Location	Cma_Chr14: 4358735 .. 4359163 (-)
Sequence length	429
RNA-Seq Expression	CmaCh14G008520.1
Synteny	CmaCh14G008520.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCAACTCCCAACCCGTCTCGCCGGTCGATCCGCAAGATCCCAATTCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCACCGCCACCGCCGCCGCCGAATTGCAAGCCAGCGCTGCCGCCGCCACCACCGCCTCCCAGGTTTATTTATACATCGCTGTCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAATCGTTGGTATTACTTCTCCGGCACAACCAGGAACTGGTCAGCCACGGCGGCACTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA

mRNA sequence

ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCAACTCCCAACCCGTCTCGCCGGTCGATCCGCAAGATCCCAATTCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCACCGCCACCGCCGCCGCCGAATTGCAAGCCAGCGCTGCCGCCGCCACCACCGCCTCCCAGGTTTATTTATACATCGCTGTCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAATCGTTGGTATTACTTCTCCGGCACAACCAGGAACTGGTCAGCCACGGCGGCACTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA

Coding sequence (CDS)

ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCAACTCCCAACCCGTCTCGCCGGTCGATCCGCAAGATCCCAATTCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCACCGCCACCGCCGCCGCCGAATTGCAAGCCAGCGCTGCCGCCGCCACCACCGCCTCCCAGGTTTATTTATACATCGCTGTCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAATCGTTGGTATTACTTCTCCGGCACAACCAGGAACTGGTCAGCCACGGCGGCACTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA

Protein sequence

MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWSATAALVVALGCGALNLMAFGKW

Homology

[Close]

BLAST of CmaCh14G008520.1 vs. ExPASy TrEMBL
Match: A0A6J1J7W0 (probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=LOC111482528 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.4e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 60
           MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 60

Query: 61  PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWS 120
           PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWS
Sbjct: 61  PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWS 120

Query: 121 ATAALVVALGCGALNLMAFGKW 143
           ATAALVVALGCGALNLMAFGKW
Sbjct: 121 ATAALVVALGCGALNLMAFGKW 142

[Close]

BLAST of CmaCh14G008520.1 vs. ExPASy TrEMBL
Match: A0A5A7V4T2 (Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00500 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42
Identity = 102/147 (69.39%), Postives = 113/147 (76.87%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSP--VDPQDPNSEIKCGSCPCSNPCVKQF--PPP 60
           M  SAAI LS SFL L L LA+SQ  SP  +DPQ+P++EIKCGSCPCSNPC++Q   PPP
Sbjct: 1   MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 60

Query: 61  PPPPPPNCKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTGVPGNLYQIDANNRWYYFSGT 120
           PPPPP  C P +   PPPPRFIYT  SP PPPPRF YTTGVPGNLY+IDANN WYYFSGT
Sbjct: 61  PPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT 120

Query: 121 TRNWSATAALVVALGCGALNLMAFGKW 143
           T      AA+VVALGCGAL+LM F KW
Sbjct: 121 TGTRPGMAAVVVALGCGALHLMGFSKW 147

[Close]

BLAST of CmaCh14G008520.1 vs. ExPASy TrEMBL
Match: A0A0A0L7R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42
Identity = 102/150 (68.00%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSP--VDPQDPNSEIKCGSCPCSNPCVKQF----- 60
           MAP AAI LS SFL   L LANSQ  SP  VDPQ+P++EIKCGSCPCSNPC++Q      
Sbjct: 3   MAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62

Query: 61  PPPPPPPPPNCKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTGVPGNLYQIDANNRWYYF 120
           PPPPPPPP  C P +   PPPPRFIYT+ SP PPPPRF YTTGVPGNLY+IDANN WYYF
Sbjct: 63  PPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYF 122

Query: 121 SGTTRNWSATAALVVALGCGALNLMAFGKW 143
           SGT R     AA+ VA+GCGAL+LM F KW
Sbjct: 123 SGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]

BLAST of CmaCh14G008520.1 vs. ExPASy TrEMBL
Match: A0A6J1GAW3 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452509 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24
Identity = 82/145 (56.55%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCP-CSNPCVKQFPPPPPP 60
           MAPSAAI     FL L L    + P     P DP++EI C S   CSNP V+Q  P PP 
Sbjct: 1   MAPSAAI-----FLSLLLSFIQTSPPISASPLDPDTEINCDSTTLCSNPSVQQLQPSPPL 60

Query: 61  PPPNCKPALPPPPPPPRFIYTSLSPPPPP-RFIYTTGVPGNLYQIDANNRWYYFSGTTRN 120
           P        PPP PPPRF YT+LS PPPP RFIYTTGVP +LYQ D  NRWYYFSG    
Sbjct: 61  P--------PPPLPPPRFTYTTLSSPPPPLRFIYTTGVPSDLYQNDEKNRWYYFSGAVGK 120

Query: 121 WSATAAL-VVALGCGALNLMAFGKW 143
             A AAL VV L CGAL+L+ FGKW
Sbjct: 121 PPAMAALVVVGLACGALDLIVFGKW 132

[Close]

BLAST of CmaCh14G008520.1 vs. ExPASy TrEMBL
Match: A0A2N9I535 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47001 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 67/126 (53.17%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 18  LHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPNCKPALPPPPP---- 77
           L   NS P    D ++ N+E+KCG+CPC NPC +Q PPPPPPPPP   P LPPPPP    
Sbjct: 11  LDQTNSLP----DHEEANTELKCGTCPCVNPCEQQQPPPPPPPPP---PPLPPPPPPQTP 70

Query: 78  --PPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWSATAALVVALGC 137
             P    +T  +PPPPPRFIY TGVPGNLY  D  N W Y+SG  RN    + L+V  GC
Sbjct: 71  KNPSSQYFTPQAPPPPPRFIYFTGVPGNLYNTDPYNTWVYYSGADRNVIVGSPLLV--GC 127

[Close]

BLAST of CmaCh14G008520.1 vs. NCBI nr
Match: XP_022984145.1 (probable pathogenesis-related protein ARB_02861 [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 7.0e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 60
           MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 60

Query: 61  PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWS 120
           PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWS
Sbjct: 61  PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWS 120

Query: 121 ATAALVVALGCGALNLMAFGKW 143
           ATAALVVALGCGALNLMAFGKW
Sbjct: 121 ATAALVVALGCGALNLMAFGKW 142

[Close]

BLAST of CmaCh14G008520.1 vs. NCBI nr
Match: KAG7017949.1 (hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.8 bits (691), Expect = 6.8e-69
Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 60
           MAPSAAIPLSLSFLFLFLHLA+SQPVSPVDPQDPNSEIKCGSCPCSNPCVKQF  PPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLADSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQF--PPPPP 60

Query: 61  PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWS 120
           PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRN  
Sbjct: 61  PPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNQP 120

Query: 121 ATAALVVALGCGALNLMAFGKW 143
           ATAALVVALGCGALNLMAFGKW
Sbjct: 121 ATAALVVALGCGALNLMAFGKW 140

[Close]

BLAST of CmaCh14G008520.1 vs. NCBI nr
Match: KAG6581215.1 (hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQF-PPPPPP 60
           MAPSAAIPLSLSFLFLFLHLA+SQPVSPVD QDPNSEIKCGSCPCSNPCVKQF PPPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 60

Query: 61  PPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNW 120
           PPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRN 
Sbjct: 61  PPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNQ 120

Query: 121 SATAALVVALGCGALNLMAFGKW 143
            ATAALVVALGCGALNLMAFGKW
Sbjct: 121 PATAALVVALGCGALNLMAFGKW 143

[Close]

BLAST of CmaCh14G008520.1 vs. NCBI nr
Match: XP_023528316.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68
Identity = 136/143 (95.10%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQF-PPPPPP 60
           MAPSAAIPLSLSFLFLFLHLA+SQP SPVDPQDPNSEIKCGSCPCSNPCVKQF PPPPPP
Sbjct: 3   MAPSAAIPLSLSFLFLFLHLADSQPFSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 62

Query: 61  PPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNW 120
           PPPNCKPALPPPPPPPRFIYT+LSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRN 
Sbjct: 63  PPPNCKPALPPPPPPPRFIYTALSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNR 122

Query: 121 SATAALVVALGCGALNLMAFGKW 143
            ATA LVVALGCGALNLMAFGKW
Sbjct: 123 PATAVLVVALGCGALNLMAFGKW 145

[Close]

BLAST of CmaCh14G008520.1 vs. NCBI nr
Match: KAA0060761.1 (formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-42
Identity = 102/147 (69.39%), Postives = 113/147 (76.87%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSP--VDPQDPNSEIKCGSCPCSNPCVKQF--PPP 60
           M  SAAI LS SFL L L LA+SQ  SP  +DPQ+P++EIKCGSCPCSNPC++Q   PPP
Sbjct: 1   MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 60

Query: 61  PPPPPPNCKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTGVPGNLYQIDANNRWYYFSGT 120
           PPPPP  C P +   PPPPRFIYT  SP PPPPRF YTTGVPGNLY+IDANN WYYFSGT
Sbjct: 61  PPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT 120

Query: 121 TRNWSATAALVVALGCGALNLMAFGKW 143
           T      AA+VVALGCGAL+LM F KW
Sbjct: 121 TGTRPGMAAVVVALGCGALHLMGFSKW 147

[Close]

BLAST of CmaCh14G008520.1 vs. TAIR 10
Match: AT3G03350.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 68  LPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWSATAALVV 127
           L PPPP   +   S S PPPP+++Y TGVPG LY+ + +++W Y S   RN      ++V
Sbjct: 28  LRPPPPRKTYCSKSSSSPPPPKYMYVTGVPGELYRTEPDDQWGYNSSVNRNLVKCLLVIV 87

Query: 128 ALGCGALN 136
            +G G +N
Sbjct: 88  IVGFGVIN 95

[Close]

BLAST of CmaCh14G008520.1 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 37/76 (48.68%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 29  VDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPP 88
           +D  DP   IKC      NP     PPPP PPPP C P    PPPPP+ + +   PPPP 
Sbjct: 43  LDEVDP---IKCSPSCIQNP-PPPSPPPPSPPPPACPPPPALPPPPPKKVSSYCPPPPPA 102

Query: 89  RFIYTTGVPGNLYQID 105
            F+Y TG PGNLY +D
Sbjct: 103 NFLYITGPPGNLYPVD 114

[Close]

BLAST of CmaCh14G008520.1 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 45.1 bits (105), Expect = 5.6e-05
Identity = 40/101 (39.60%), Postives = 49/101 (48.51%), Query Frame = 0


Query: 6   AIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPP--PPPPPPPN 65
           A  L  + +FL   +  +   S  + +     IKC       PC++  PP  PPPP PP 
Sbjct: 50  AATLLTTVVFLTFPMIINASDSSTNRKLEEDPIKC------TPCLQNIPPPSPPPPSPPP 109

Query: 66  CKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQID 105
              A PPPP PP     S  PPPP  +IY TG PG LY ID
Sbjct: 110 PSQACPPPPLPPSPPKKSYCPPPPSTYIYMTGPPGELYPID 144

[Close]

BLAST of CmaCh14G008520.1 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04
Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPP 60
           M+P       L+   L   +  + P+  ++ +D ++E+     PC      Q PPPP PP
Sbjct: 1   MSPKTRRSTDLAATILMAIVILASPII-INAEDSSAEVDVNCIPCLQ---NQPPPPPSPP 60

Query: 61  PPNCKPALPPP-PPPPRFIYTSLS------PPPPPRFIYTTGVPGNLYQID 105
           PP+C P+ PPP PPPP+      S      PPPPP +++T   PG+LY I+
Sbjct: 61  PPSCTPSPPPPSPPPPKKSSCPPSPLPPPPPPPPPNYVFTY-PPGDLYPIE 106

[Close]

BLAST of CmaCh14G008520.1 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04
Identity = 33/68 (48.53%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 38  IKCGSCPCS--NPCVKQFPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPP--PPRFIYT 97
           I C S  CS  +P     PPPPPPPPP   P  PPPPPPP ++Y S  PPP  PP ++Y 
Sbjct: 367 IDCASFGCSPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYP 426

Query: 98  TGVPGNLY 102
              P  +Y
Sbjct: 427 PPPPPYVY 434

The following BLAST results are available for this feature:

BLAST of CmaCh14G008520.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G008520.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7W0	3.4e-74	100.00	probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7V4T2	1.5e-42	69.39	Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A0A0L7R0	1.5e-42	68.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1	[more]
A0A6J1GAW3	1.1e-24	56.55	leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A2N9I535	1.6e-20	53.17	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47001 PE=4 SV=1	[more]

BLAST of CmaCh14G008520.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984145.1	7.0e-74	100.00	probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]	[more]
KAG7017949.1	6.8e-69	96.48	hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6581215.1	1.2e-68	96.50	hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023528316.1	2.6e-68	95.10	leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
KAA0060761.1	3.2e-42	69.39	formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein...	[more]

BLAST of CmaCh14G008520.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03350.2	1.6e-07	41.18	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G23040.1	2.1e-07	48.68	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70990.1	5.6e-05	39.60	proline-rich family protein	[more]
AT1G02405.1	2.1e-04	35.14	proline-rich family protein	[more]
AT3G22800.1	2.1e-04	48.53	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35094:SF7	PROTEIN, PUTATIVE-RELATED	coord: 27..138
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 27..138

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G008520	CmaCh14G008520	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G008520.1:exon:720	CmaCh14G008520.1:exon:720	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G008520.1:cds	CmaCh14G008520.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G008520.1	CmaCh14G008520.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane