CmaCh14G004940.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G004940.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	HTH myb-type domain-containing protein
Location	Cma_Chr14: 2422084 .. 2423294 (-)
Sequence length	1023
RNA-Seq Expression	CmaCh14G004940.1
Synteny	CmaCh14G004940.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAAGAGGATTCAAATTGGTTCTCAAAATGGGAAGAGGAGCTTCCTTCTCCTGATGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTGTGGCATTTGACATCTCAAGCTCAAATGCTGTCATTGATAATAACAGCCATCCGCCGCCGCCTCCTCCGGTTGTCGCTCAGCCGAGTTCTGCTGATTTTGGGGATTGTGGGGACCTGGGGTCCGGCGAGCCTGCGAGAACCCTGAAGCGGCCGCGCCTGGTCTGGACTCCACAGCTCCATAAGCGATTTGTCGATGCCGTCGCCCATTTGGGGATAAAAAATGCTGTCCCGAAAACCATAATGCAGTTGATGAGCGTCGATGGGTTAACTCGTGAAAACGTAGCTAGCCATTTGCAGAAATACCGTCTCTATTTGAAGCGTATGCAGGGGATTTCCAGCGGCAGCGGTGGCAGTGGCGGTGCTAATGGTGCCGCCACTTCAGATCTCGCTACTGATCATTTGTTCGCCAGTTCCCCTGTTCCGCCTCATTTTCTTCACTCTTCTCGGACTAATTCCGACCATTTCTTGCCGTTTGTACCCGTCGGAGCGCTGCAGCAGCACCACCACATGGCTGCCGCCGCCGCCGCCGCTCAGTACCACCGGCAAGTGGCTCAATTTGGGTCGCCGCCAAATGGGCAATTTGAGCGTCCGTTTTTGGCTCGGCCTATTCACCGGCTTGGGGCTCCGGTGAGTAACCCGGCGACGAATCACATCGAAGATTTGGATTCGGGTAATGCAACAGAAGGGAGGAAGGTTCTTACTCTTTTCCCCACCGGAAACGATTAAAATTTCTTTCAAACAGAAATCCGGCTAGAGACCTCTGTTTCACCGGCGGTAATGGCGTTTTTCCGATCTCCAAATCCCAGTATTCCAAAACAGTTCGCCGCCGGCAGCCGGTTAAAGGTAAAATCAATTCTATTTCCGAACGAGTAAAATTGTACAAGACTCTGAAAACCGCCATTGAAATCCTCAAAACAGAGCTCGAGGATTTTCAGCTCTGTTCATCATCATCTTCATCAAATCCTCTGTTTTTTTCTTAATCGATGCAAAATTAGTGAATCAGATCCAAATAAAGTTCATTTTTTACTCTTTTTATTTGAAGATTTGATCGAGTTCGATCTTTTTTCAAGGCAATAATCTTGAAATCAAAGCACCAGATTCCTTGA

mRNA sequence

ATGAGGGAAGAGGATTCAAATTGGTTCTCAAAATGGGAAGAGGAGCTTCCTTCTCCTGATGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTGTGGCATTTGACATCTCAAGCTCAAATGCTGTCATTGATAATAACAGCCATCCGCCGCCGCCTCCTCCGGTTGTCGCTCAGCCGAGTTCTGCTGATTTTGGGGATTGTGGGGACCTGGGGTCCGGCGAGCCTGCGAGAACCCTGAAGCGGCCGCGCCTGGTCTGGACTCCACAGCTCCATAAGCGATTTGTCGATGCCGTCGCCCATTTGGGGATAAAAAATGCTGTCCCGAAAACCATAATGCAGTTGATGAGCGTCGATGGGTTAACTCGTGAAAACGTAGCTAGCCATTTGCAGAAATACCGTCTCTATTTGAAGCGTATGCAGGGGATTTCCAGCGGCAGCGGTGGCAGTGGCGGTGCTAATGGTGCCGCCACTTCAGATCTCGCTACTGATCATTTGTTCGCCAGTTCCCCTGTTCCGCCTCATTTTCTTCACTCTTCTCGGACTAATTCCGACCATTTCTTGCCGTTTGTACCCGTCGGAGCGCTGCAGCAGCACCACCACATGGCTGCCGCCGCCGCCGCCGCTCAGTACCACCGGCAAGTGGCTCAATTTGGGTCGCCGCCAAATGGGCAATTTGAGCGTCCGTTTTTGGCTCGGCCTATTCACCGGCTTGGGGCTCCGGTGAGTAACCCGGCGACGAATCACATCGAAGATTTGGATTCGGAAATCCGGCTAGAGACCTCTGTTTCACCGGCGGTAATGGCGTTTTTCCGATCTCCAAATCCCAGTATTCCAAAACAGTTCGCCGCCGGCAGCCGGTTAAAGACTCTGAAAACCGCCATTGAAATCCTCAAAACAGAGCTCGAGGATTTTCAGCTCTGTTCATCATCATCTTCATCAAATCCTCTATTTGATCGAGTTCGATCTTTTTTCAAGGCAATAATCTTGAAATCAAAGCACCAGATTCCTTGA

Coding sequence (CDS)

ATGAGGGAAGAGGATTCAAATTGGTTCTCAAAATGGGAAGAGGAGCTTCCTTCTCCTGATGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTGTGGCATTTGACATCTCAAGCTCAAATGCTGTCATTGATAATAACAGCCATCCGCCGCCGCCTCCTCCGGTTGTCGCTCAGCCGAGTTCTGCTGATTTTGGGGATTGTGGGGACCTGGGGTCCGGCGAGCCTGCGAGAACCCTGAAGCGGCCGCGCCTGGTCTGGACTCCACAGCTCCATAAGCGATTTGTCGATGCCGTCGCCCATTTGGGGATAAAAAATGCTGTCCCGAAAACCATAATGCAGTTGATGAGCGTCGATGGGTTAACTCGTGAAAACGTAGCTAGCCATTTGCAGAAATACCGTCTCTATTTGAAGCGTATGCAGGGGATTTCCAGCGGCAGCGGTGGCAGTGGCGGTGCTAATGGTGCCGCCACTTCAGATCTCGCTACTGATCATTTGTTCGCCAGTTCCCCTGTTCCGCCTCATTTTCTTCACTCTTCTCGGACTAATTCCGACCATTTCTTGCCGTTTGTACCCGTCGGAGCGCTGCAGCAGCACCACCACATGGCTGCCGCCGCCGCCGCCGCTCAGTACCACCGGCAAGTGGCTCAATTTGGGTCGCCGCCAAATGGGCAATTTGAGCGTCCGTTTTTGGCTCGGCCTATTCACCGGCTTGGGGCTCCGGTGAGTAACCCGGCGACGAATCACATCGAAGATTTGGATTCGGAAATCCGGCTAGAGACCTCTGTTTCACCGGCGGTAATGGCGTTTTTCCGATCTCCAAATCCCAGTATTCCAAAACAGTTCGCCGCCGGCAGCCGGTTAAAGACTCTGAAAACCGCCATTGAAATCCTCAAAACAGAGCTCGAGGATTTTCAGCTCTGTTCATCATCATCTTCATCAAATCCTCTATTTGATCGAGTTCGATCTTTTTTCAAGGCAATAATCTTGAAATCAAAGCACCAGATTCCTTGA

Protein sequence

MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHRLGAPVSNPATNHIEDLDSEIRLETSVSPAVMAFFRSPNPSIPKQFAAGSRLKTLKTAIEILKTELEDFQLCSSSSSSNPLFDRVRSFFKAIILKSKHQIP

Homology

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.2e-59
Identity = 130/212 (61.32%), Postives = 149/212 (70.28%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNN---------- 60
           MRE++ NWF +WEEELPSP+EL+P+SQTLITP LA+AF I S N  + +           
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  ------SHPPPPPPVVAQPSSADFGDCGDLGS----GEPARTLKRPRLVWTPQLHKRFVD 120
                 + P P PP +   S    GD  DLGS    GEPARTLKRPRLVWTPQLHKRFVD
Sbjct: 61  QSSTTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQLHKRFVD 120

Query: 121 AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAA 180
           AV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG  +G+G +GG     
Sbjct: 121 AVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG-GNGNGITGG--HVI 180

Query: 181 TSDLATDHLFASSPVPPHFLHSSRTNSDHFLP 193
            SD ATD LFASSPVP HFL     + D+ +P
Sbjct: 181 VSDSATDRLFASSPVPAHFL-----SPDYLMP 204

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.9e-36
Identity = 100/222 (45.05%), Postives = 122/222 (54.95%), Query Frame = 0


Query: 5   DSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDI------------------------ 64
           D +  S+WE  LPS ++L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  --------SSSNAVIDNNSHPPPPPPVVAQPSSADFGDCGDLGSGEP------------- 124
                   SS+N V + +      P   ++      GD  D G  +P             
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 ----ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 178
                +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.2e-35
Identity = 103/232 (44.40%), Postives = 123/232 (53.02%), Query Frame = 0


Query: 11  KWEEELPSPDELMPLSQTLITPDLAVAFDI------------SSSNAVIDN----NSHPP 70
           +WE  LP  DEL PLSQ L+   LA AF I             +S A +      +S   
Sbjct: 21  EWETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRTLLDVHRASAATVSRLRRASSSSS 80

Query: 71  PPPPVVAQPSSADFGDCGDLGSGEPA-------RTLKRPRLVWTPQLHKRFVDAVAHLGI 130
              P  A   +    D  + G G           + KR RLVWTPQLHKRFV+ VAHLG+
Sbjct: 81  SSFPAFASKGAGTGADEAESGGGADGGNGNTNNSSSKRARLVWTPQLHKRFVEVVAHLGM 140

Query: 131 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATD 190
           KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQG+S+         G + S    D
Sbjct: 141 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSN--------EGPSPS----D 200

Query: 191 HLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHH----MAAAAAAAQYH 216
           H+FAS+PVP   LH    +  H  P         HHH     A AA  + YH
Sbjct: 201 HIFASTPVPHASLHDQVPSPYHPHP---------HHHSYNNAAYAATVSSYH 231

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-33
Identity = 106/258 (41.09%), Postives = 137/258 (53.10%), Query Frame = 0


Query: 11  KWEEELPSPDELMPLSQTLITPDLAVAFDI-----------------------SSSNA-- 70
           +WE  LP+ D+L PLSQ L+   LA+AF +                       SS+NA  
Sbjct: 28  EWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASS 87

Query: 71  ----VID--NNSHPPPPP----------PVVAQPSSADFGDCGDLGSGEPARTLKRPRLV 130
               V+D   +S P   P              + S+A+ GD G        +T KRPRLV
Sbjct: 88  VMEEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGP--EDASGKTSKRPRLV 147

Query: 131 WTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSG 190
           WTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QG+++ 
Sbjct: 148 WTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTE 207

Query: 191 SGGSGGANGAATSDLATDHLFASSPVPPH-FLHSSRTNSDHFLPFVPVGALQQHHHMAAA 227
                          ++D LF+S+PVPP  F     +N    +P VPV ++         
Sbjct: 208 EDPYS----------SSDQLFSSTPVPPQSFQDGGGSNGKLGVP-VPVPSMVPIPGYGNQ 267

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy Swiss-Prot
Match: A2XE31 (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 72/170 (42.35%), Postives = 96/170 (56.47%), Query Frame = 0


Query: 70  DCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 129
           D G+L SG+P+ T K+PR+VW+ +LH++FV+AV HLGI  AVPK I++LM+V GLTRENV
Sbjct: 187 DDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENV 246

Query: 130 ASHLQKYRLYLKRM----QGISS-----GSGGSGGANGAATSDLATDHLFASSPVPPHFL 189
           ASHLQK+RLYLKR+     GI++      S G  G+ G     L    L AS  +PP  L
Sbjct: 247 ASHLQKFRLYLKRIAQHHAGIANPFCPPASSGKVGSLGG----LDFQALAASGQIPPQAL 306

Query: 190 HS------SRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSP 225
            +       R  +   LP    G  Q    +AA      +  +   FG P
Sbjct: 307 AALQDELLGRPTNSLVLP----GRDQSSLRLAAVKGNKPHGEREIAFGQP 348

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy TrEMBL
Match: A0A6J1J8N8 (transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111482343 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.1e-145
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVV 60
           MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVV
Sbjct: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVV 60

Query: 61  AQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 120
           AQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS
Sbjct: 61  AQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 120

Query: 121 VDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHFL 180
           VDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHFL
Sbjct: 121 VDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHFL 180

Query: 181 HSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHR 240
           HSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHR
Sbjct: 181 HSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHR 240

Query: 241 LGAPVSNPATNHIEDLDS 259
           LGAPVSNPATNHIEDLDS
Sbjct: 241 LGAPVSNPATNHIEDLDS 258

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy TrEMBL
Match: A0A6J1F4V0 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111442136 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.9e-141
Identity = 253/259 (97.68%), Postives = 254/259 (98.07%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH-PPPPPPV 60
           MREEDSNWFSKWEEELPSP+ELMPLSQTLITPDLAVAFDISSSNA IDNNSH PPPPPPV
Sbjct: 1   MREEDSNWFSKWEEELPSPEELMPLSQTLITPDLAVAFDISSSNAAIDNNSHPPPPPPPV 60

Query: 61  VAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120
           VAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM
Sbjct: 61  VAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120

Query: 121 SVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHF 180
           SVDGLTRENVASHLQKYRLYLKRMQGISSGSGG GGANGAA SDLATDHLFASSPVPPHF
Sbjct: 121 SVDGLTRENVASHLQKYRLYLKRMQGISSGSGGGGGANGAAASDLATDHLFASSPVPPHF 180

Query: 181 LHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIH 240
           LHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIH
Sbjct: 181 LHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIH 240

Query: 241 RLGAPVSNPATNHIEDLDS 259
           RLGAPVSNPATNH EDLDS
Sbjct: 241 RLGAPVSNPATNHSEDLDS 259

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy TrEMBL
Match: A0A6J1H3F6 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111459631 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 2.3e-116
Identity = 220/268 (82.09%), Postives = 234/268 (87.31%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH--PPPPPP 60
           MRE+DSNWFSKW++ELPSPDELMPLSQTLITPDLA+AFDI + ++ I+NN+H  PPPPPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHPPPPPPP 60

Query: 61  VVAQPSSADFGDCGDLGSG-----EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPK 120
           V  QPSSADFGD GD  SG     EPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVPK
Sbjct: 61  VPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPK 120

Query: 121 TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGG--SGGAN-GAATSDLATDHLF 180
           TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGIS GSGG  SGGA   +  SD ATDHLF
Sbjct: 121 TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHLF 180

Query: 181 ASSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFE 240
           ASSPVPPHFLHSSR NSDHFLPFVPVGAL QHHH  AAAAAAQYHRQVA FGSPPNGQFE
Sbjct: 181 ASSPVPPHFLHSSRANSDHFLPFVPVGAL-QHHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240

Query: 241 RPFLARPIHRLGAPVSNPATNHIEDLDS 259
            PFLARP+HR+G PV+ PATN+ EDLDS
Sbjct: 241 HPFLARPVHRIGTPVTTPATNYSEDLDS 267

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy TrEMBL
Match: A0A5A7UK93 (Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006440 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.1e-115
Identity = 224/272 (82.35%), Postives = 237/272 (87.13%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH---PPPPP 60
           M+E+DSNWFSKWE+ELPSPDELMPLSQTLITPDLA+AFDI++SN +  N+SH   PPPPP
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITNSNPL--NDSHPPPPPPPP 60

Query: 61  PVVAQPSSADFGDCGDLGSG---EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120
           PV+ QPSSADF D GDLGSG   EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT
Sbjct: 61  PVIIQPSSADFADSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120

Query: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAA-----TSDLATDHL 180
           IMQLMSVDGLTRENVASHLQKYRLYLKRMQGIS GSG  GGANG A      SD ATDHL
Sbjct: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSG--GGANGGAGLVSPASDPATDHL 180

Query: 181 FASSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHH-MAAAAAAAQYHRQVAQFGS--PPN 240
           FASSPVPPHFLHS+R NSDHFLPFVPVGALQ HHH MAAAAAAAQYHRQVA FGS  P N
Sbjct: 181 FASSPVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTN 240

Query: 241 GQFERPFLARPIHRLGAPVSNPATNHIEDLDS 259
           GQFE  FLARP+HR+GAPVS P TN+ EDLDS
Sbjct: 241 GQFENTFLARPVHRVGAPVSTPVTNYSEDLDS 268

[Close]

BLAST of CmaCh14G004940.1 vs. ExPASy TrEMBL
Match: A0A1S3B723 (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103486866 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.1e-115
Identity = 224/272 (82.35%), Postives = 237/272 (87.13%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH---PPPPP 60
           M+E+DSNWFSKWE+ELPSPDELMPLSQTLITPDLA+AFDI++SN +  N+SH   PPPPP
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITNSNPL--NDSHPPPPPPPP 60

Query: 61  PVVAQPSSADFGDCGDLGSG---EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120
           PV+ QPSSADF D GDLGSG   EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT
Sbjct: 61  PVIIQPSSADFADSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120

Query: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAA-----TSDLATDHL 180
           IMQLMSVDGLTRENVASHLQKYRLYLKRMQGIS GSG  GGANG A      SD ATDHL
Sbjct: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSG--GGANGGAGLVSPASDPATDHL 180

Query: 181 FASSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHH-MAAAAAAAQYHRQVAQFGS--PPN 240
           FASSPVPPHFLHS+R NSDHFLPFVPVGALQ HHH MAAAAAAAQYHRQVA FGS  P N
Sbjct: 181 FASSPVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTN 240

Query: 241 GQFERPFLARPIHRLGAPVSNPATNHIEDLDS 259
           GQFE  FLARP+HR+GAPVS P TN+ EDLDS
Sbjct: 241 GQFENTFLARPVHRVGAPVSTPVTNYSEDLDS 268

[Close]

BLAST of CmaCh14G004940.1 vs. NCBI nr
Match: XP_022983849.1 (transcription factor MYBC1-like [Cucurbita maxima])

HSP 1 Score: 523.9 bits (1348), Expect = 1.1e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVV 60
           MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVV
Sbjct: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVV 60

Query: 61  AQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 120
           AQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS
Sbjct: 61  AQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 120

Query: 121 VDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHFL 180
           VDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHFL
Sbjct: 121 VDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHFL 180

Query: 181 HSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHR 240
           HSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHR
Sbjct: 181 HSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHR 240

Query: 241 LGAPVSNPATNHIEDLDS 259
           LGAPVSNPATNHIEDLDS
Sbjct: 241 LGAPVSNPATNHIEDLDS 258

[Close]

BLAST of CmaCh14G004940.1 vs. NCBI nr
Match: XP_022935182.1 (transcription factor MYBC1-like [Cucurbita moschata])

HSP 1 Score: 510.4 bits (1313), Expect = 1.2e-140
Identity = 253/259 (97.68%), Postives = 254/259 (98.07%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH-PPPPPPV 60
           MREEDSNWFSKWEEELPSP+ELMPLSQTLITPDLAVAFDISSSNA IDNNSH PPPPPPV
Sbjct: 1   MREEDSNWFSKWEEELPSPEELMPLSQTLITPDLAVAFDISSSNAAIDNNSHPPPPPPPV 60

Query: 61  VAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120
           VAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM
Sbjct: 61  VAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120

Query: 121 SVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHF 180
           SVDGLTRENVASHLQKYRLYLKRMQGISSGSGG GGANGAA SDLATDHLFASSPVPPHF
Sbjct: 121 SVDGLTRENVASHLQKYRLYLKRMQGISSGSGGGGGANGAAASDLATDHLFASSPVPPHF 180

Query: 181 LHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIH 240
           LHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIH
Sbjct: 181 LHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIH 240

Query: 241 RLGAPVSNPATNHIEDLDS 259
           RLGAPVSNPATNH EDLDS
Sbjct: 241 RLGAPVSNPATNHSEDLDS 259

[Close]

BLAST of CmaCh14G004940.1 vs. NCBI nr
Match: KAG6580869.1 (Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017625.1 Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 509.6 bits (1311), Expect = 2.1e-140
Identity = 253/261 (96.93%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH---PPPPP 60
           MREEDSNWFSKWEEELPSP+ELMPLSQTLITPDLAVAFDISSSNA IDNNSH   PPPPP
Sbjct: 1   MREEDSNWFSKWEEELPSPEELMPLSQTLITPDLAVAFDISSSNAAIDNNSHPPPPPPPP 60

Query: 61  PVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 120
           PVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ
Sbjct: 61  PVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 120

Query: 121 LMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPP 180
           LMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGG GGANGAA SDLATDHLFASSPVPP
Sbjct: 121 LMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGGGGANGAAASDLATDHLFASSPVPP 180

Query: 181 HFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARP 240
           HFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARP
Sbjct: 181 HFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARP 240

Query: 241 IHRLGAPVSNPATNHIEDLDS 259
           IHRLGAPVSNPATNH EDLDS
Sbjct: 241 IHRLGAPVSNPATNHSEDLDS 261

[Close]

BLAST of CmaCh14G004940.1 vs. NCBI nr
Match: XP_023528286.1 (transcription factor MYBC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.4 bits (1308), Expect = 4.6e-140
Identity = 252/261 (96.55%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH---PPPPP 60
           MREEDSNWFSKWEEELPSP+ELMPLSQTLITPDLAVAFDISSSNA IDNNSH   PPPPP
Sbjct: 1   MREEDSNWFSKWEEELPSPEELMPLSQTLITPDLAVAFDISSSNAAIDNNSHPPPPPPPP 60

Query: 61  PVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 120
           PVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ
Sbjct: 61  PVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 120

Query: 121 LMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPP 180
           LMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGG GGANGAA SDLATDHLFA+SPVPP
Sbjct: 121 LMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGGGGANGAAASDLATDHLFATSPVPP 180

Query: 181 HFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARP 240
           HFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARP
Sbjct: 181 HFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARP 240

Query: 241 IHRLGAPVSNPATNHIEDLDS 259
           IHRLGAPVSNPATNH EDLDS
Sbjct: 241 IHRLGAPVSNPATNHSEDLDS 261

[Close]

BLAST of CmaCh14G004940.1 vs. NCBI nr
Match: XP_038904980.1 (transcription factor MYBC1-like [Benincasa hispida])

HSP 1 Score: 431.0 bits (1107), Expect = 9.4e-117
Identity = 222/267 (83.15%), Postives = 235/267 (88.01%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSH---PPPPP 60
           M+E+DSNWFSKWE ELPSP+ELMPLSQTLITPDLA+AFDI++SN  I+NNSH   PPPPP
Sbjct: 1   MKEDDSNWFSKWESELPSPEELMPLSQTLITPDLALAFDITNSNPPINNNSHPPPPPPPP 60

Query: 61  PVVAQPSSADFGDCGDLGSG---EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120
           PV+ QPSSADFGD GDL SG   EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT
Sbjct: 61  PVLTQPSSADFGDSGDLASGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120

Query: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGG--SGGAN-GAATSDLATDHLFA 180
           IMQLMSVDGLTRENVASHLQKYRLYLKRMQGIS GSGG  SGGA   +A SD ATDHLFA
Sbjct: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGTSGGAGLPSAASDPATDHLFA 180

Query: 181 SSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFER 240
           SSPVP HFLHS+R NSDHFLPFVPVGALQ HHH   AAAAAQYHRQVAQFGSPPNGQ E 
Sbjct: 181 SSPVPAHFLHSARGNSDHFLPFVPVGALQHHHHQ-MAAAAAQYHRQVAQFGSPPNGQLEH 240

Query: 241 PFLARPIHRLGAPVSNPATNHIEDLDS 259
           PFL R +HR+GAPVS PATN+ EDLDS
Sbjct: 241 PFLTRSVHRIGAPVSTPATNYSEDLDS 266

[Close]

BLAST of CmaCh14G004940.1 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 302.0 bits (772), Expect = 6.1e-82
Identity = 184/325 (56.62%), Postives = 215/325 (66.15%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHP------- 60
           MRE+DS+WF++WEEELPSP+ELMP+SQ+LI+PDLA+AFDI + N    N++ P       
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  --PPPPPVVAQP-----SSADF-GDCGDLGSG-----EPARTLKRPRLVWTPQLHKRFVD 120
             PP P  +  P     SSA+F  D  DLGSG     EPARTLKRPRLVWTPQLHKRFVD
Sbjct: 61  TTPPTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHKRFVD 120

Query: 121 AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAA 180
           AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQG+SSG        G A
Sbjct: 121 AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSG--------GGA 180

Query: 181 TSDLATDHLFASSPVPPHFLHSSRT-NSDHFLP-FVPVGALQQHHHMAAAAAAA------ 240
            SD ATD LFASSPVP HFLH +R  +SDHF+P FVP+  LQQ   MAAAAAAA      
Sbjct: 181 GSDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQQQQMAAAAAAAAAANPH 240

Query: 241 ----QYHRQVA-------------------QFGSP---------PNGQFERPFLA----- 259
               Q+HRQ+A                   QFGSP          NG+F+  FLA     
Sbjct: 241 LQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFLAVRQTQ 300

[Close]

BLAST of CmaCh14G004940.1 vs. TAIR 10
Match: AT5G05090.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 5.5e-75
Identity = 162/258 (62.79%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNNSHPPPPPPVV 60
           MREEDSNWF+KWEEELPSP+EL+PLSQ+LITPDLA+AFD+  +N   ++NS  P P    
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNN---NSNSGQPLPQTTP 60

Query: 61  AQP-SSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120
            QP SSA+    GD    EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM
Sbjct: 61  PQPNSSAEI--AGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120

Query: 121 SVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAATSDLATDHLFASSPVPPHF 180
           SVDGLTRENVASHLQKYRLYLKRM+     SGG GG +G       +DHLFASSPVPPHF
Sbjct: 121 SVDGLTRENVASHLQKYRLYLKRMK-----SGGGGGGSG------DSDHLFASSPVPPHF 180

Query: 181 LH-SSRTNSDHFLP-FVPVGALQQHHHMAAAAAAAQYHRQVA--QFGSPPNGQFERPFLA 240
           LH +SR +SD F+P FVP+   QQH    AA  +   HRQ++   F SP     +  FLA
Sbjct: 181 LHPTSRQSSDLFIPSFVPISTQQQH---IAAPPSQFLHRQISAVNFTSPTKATDQAMFLA 239

Query: 241 RPIHRLGAPVSNPATNHI 254
           R    L  PV  P++ H+
Sbjct: 241 RQQSELQQPVFKPSSLHL 239

[Close]

BLAST of CmaCh14G004940.1 vs. TAIR 10
Match: AT2G40970.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 229.9 bits (585), Expect = 3.0e-60
Identity = 130/212 (61.32%), Postives = 149/212 (70.28%), Query Frame = 0


Query: 1   MREEDSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDISSSNAVIDNN---------- 60
           MRE++ NWF +WEEELPSP+EL+P+SQTLITP LA+AF I S N  + +           
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  ------SHPPPPPPVVAQPSSADFGDCGDLGS----GEPARTLKRPRLVWTPQLHKRFVD 120
                 + P P PP +   S    GD  DLGS    GEPARTLKRPRLVWTPQLHKRFVD
Sbjct: 61  QSSTTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQLHKRFVD 120

Query: 121 AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGSGGANGAA 180
           AV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG  +G+G +GG     
Sbjct: 121 AVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG-GNGNGITGG--HVI 180

Query: 181 TSDLATDHLFASSPVPPHFLHSSRTNSDHFLP 193
            SD ATD LFASSPVP HFL     + D+ +P
Sbjct: 181 VSDSATDRLFASSPVPAHFL-----SPDYLMP 204

[Close]

BLAST of CmaCh14G004940.1 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-37
Identity = 100/222 (45.05%), Postives = 122/222 (54.95%), Query Frame = 0


Query: 5   DSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDI------------------------ 64
           D +  S+WE  LPS ++L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  --------SSSNAVIDNNSHPPPPPPVVAQPSSADFGDCGDLGSGEP------------- 124
                   SS+N V + +      P   ++      GD  D G  +P             
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 ----ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 178
                +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

[Close]

BLAST of CmaCh14G004940.1 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-37
Identity = 100/222 (45.05%), Postives = 122/222 (54.95%), Query Frame = 0


Query: 5   DSNWFSKWEEELPSPDELMPLSQTLITPDLAVAFDI------------------------ 64
           D +  S+WE  LPS ++L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  --------SSSNAVIDNNSHPPPPPPVVAQPSSADFGDCGDLGSGEP------------- 124
                   SS+N V + +      P   ++      GD  D G  +P             
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 ----ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 178
                +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

The following BLAST results are available for this feature:

BLAST of CmaCh14G004940.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22210	4.2e-59	61.32	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q9SNB4	4.9e-36	45.05	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q94DH3	4.2e-35	44.40	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
Q9LTH4	1.0e-33	41.09	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
A2XE31	1.2e-21	42.35	Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of CmaCh14G004940.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J8N8	5.1e-145	100.00	transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111482343 PE=4...	[more]
A0A6J1F4V0	5.9e-141	97.68	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111442136 PE...	[more]
A0A6J1H3F6	2.3e-116	82.09	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111459631 PE...	[more]
A0A5A7UK93	1.1e-115	82.35	Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B723	1.1e-115	82.35	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103486866 PE=4 SV=1	[more]

BLAST of CmaCh14G004940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983849.1	1.1e-144	100.00	transcription factor MYBC1-like [Cucurbita maxima]	[more]
XP_022935182.1	1.2e-140	97.68	transcription factor MYBC1-like [Cucurbita moschata]	[more]
KAG6580869.1	2.1e-140	96.93	Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_023528286.1	4.6e-140	96.55	transcription factor MYBC1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038904980.1	9.4e-117	83.15	transcription factor MYBC1-like [Benincasa hispida]	[more]

BLAST of CmaCh14G004940.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10760.1	6.1e-82	56.62	Homeodomain-like superfamily protein	[more]
AT5G05090.1	5.5e-75	62.79	Homeodomain-like superfamily protein	[more]
AT2G40970.1	3.0e-60	61.32	Homeodomain-like superfamily protein	[more]
AT3G46640.1	3.5e-37	45.05	Homeodomain-like superfamily protein	[more]
AT3G46640.2	3.5e-37	45.05	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 82..144 e-value: 9.5E-32 score: 110.8
None	No IPR available	PANTHER	PTHR31442:SF31	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..257
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 86..138 e-value: 3.8E-24 score: 82.7
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 89..137 e-value: 2.6E-8 score: 33.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 90..141 score: 11.409622
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..257
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 82..142

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G004940	CmaCh14G004940	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004940.1:exon:3411	CmaCh14G004940.1:exon:3411	exon
CmaCh14G004940.1:exon:3412	CmaCh14G004940.1:exon:3412	exon
CmaCh14G004940.1:exon:3413	CmaCh14G004940.1:exon:3413	exon
CmaCh14G004940.1:exon:3414	CmaCh14G004940.1:exon:3414	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004940.1:cds	CmaCh14G004940.1:cds_4	CDS
CmaCh14G004940.1:cds	CmaCh14G004940.1:cds_3	CDS
CmaCh14G004940.1:cds	CmaCh14G004940.1:cds_2	CDS
CmaCh14G004940.1:cds	CmaCh14G004940.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004940.1	CmaCh14G004940.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity