CmaCh14G004270.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G004270.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Myb family transcription factor family protein
Location	Cma_Chr14: 1997270 .. 1997749 (+)
Sequence length	480
RNA-Seq Expression	CmaCh14G004270.1
Synteny	CmaCh14G004270.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCGCTTCAAATTTTCCCTTCATCTTCTTCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTTGCCCGAGCAATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCGCTCACGTGGGATGACAACTCCTCCGGCGCCGCCGACCACCTTGCTGGGTATTTACAGTGGCTGGAAGACAGGGATAAAGAAGAGGAATTATGTCGGCATGCTAATGAAATTGACAAATTAGCAGATATTTTCATCGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATGA

mRNA sequence

ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCGCTTCAAATTTTCCCTTCATCTTCTTCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTTGCCCGAGCAATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCGCTCACGTGGGATGACAACTCCTCCGGCGCCGCCGACCACCTTGCTGGGTATTTACAGTGGCTGGAAGACAGGGATAAAGAAGAGGAATTATGTCGGCATGCTAATGAAATTGACAAATTAGCAGATATTTTCATCGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATGA

Coding sequence (CDS)

ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCGCTTCAAATTTTCCCTTCATCTTCTTCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTTGCCCGAGCAATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCGCTCACGTGGGATGACAACTCCTCCGGCGCCGCCGACCACCTTGCTGGGTATTTACAGTGGCTGGAAGACAGGGATAAAGAAGAGGAATTATGTCGGCATGCTAATGAAATTGACAAATTAGCAGATATTTTCATCGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATGA

Protein sequence

MKMVSLSPSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

Homology

[Close]

BLAST of CmaCh14G004270.1 vs. ExPASy TrEMBL
Match: A0A6J1J6X1 (uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.1e-81
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKMVSLSPSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKR 60
           MKMVSLSPSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKR
Sbjct: 1   MKMVSLSPSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKR 60

Query: 61  NKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELCR 120
           NKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELCR
Sbjct: 61  NKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELCR 120

Query: 121 HANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 160
           HANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 HANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 159

[Close]

BLAST of CmaCh14G004270.1 vs. ExPASy TrEMBL
Match: A0A6J1FA41 (uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC111442186 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75
Identity = 155/160 (96.88%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MKMVSLSP-SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSP SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELC 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNS  AADHLAGYLQWLEDRDKEEELC
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNS--AADHLAGYLQWLEDRDKEEELC 120

Query: 121 RHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 160
           RH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 RHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 158

[Close]

BLAST of CmaCh14G004270.1 vs. ExPASy TrEMBL
Match: A0A0A0LBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 7.0e-36
Identity = 107/184 (58.15%), Postives = 119/184 (64.67%), Query Frame = 0


Query: 1   MKMVSLSPSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANH 60
           M   + S SSSLQ+ PS SS         KALLQTLILSLARAISRAKTTA         
Sbjct: 1   MSSYTSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTAF-------- 60

Query: 61  QSA-IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTWD---DNSSGAADHLAGY 120
           QSA  A KRNK KLL+GSFRLHYNWCS SSN   HV P  LT D       G  D L GY
Sbjct: 61  QSANTALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGY 120

Query: 121 LQWLEDRD-----------KEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEM 159
           LQWLE+RD           +++   +  NEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M
Sbjct: 121 LQWLEERDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDM 176

[Close]

BLAST of CmaCh14G004270.1 vs. ExPASy TrEMBL
Match: A0A5A7TJT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00520 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 107/180 (59.44%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 5   SLSPSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA- 64
           S S SSSLQ+ PS SS         KALLQTLI SLARAISRAKTTA         QSA 
Sbjct: 10  SSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF--------QSAN 69

Query: 65  IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTWDD--NSSGAADHLAGYLQWLE 124
           IA KRNK KLL+GSFRLHYNWCS SSN   HV P  LT+D         D L GYLQWLE
Sbjct: 70  IALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLE 129

Query: 125 DRD------------KEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 159
           +RD              E+     NEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Sbjct: 130 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 181

[Close]

BLAST of CmaCh14G004270.1 vs. ExPASy TrEMBL
Match: A0A1S3B8H1 (uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 107/180 (59.44%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 5   SLSPSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA- 64
           S S SSSLQ+ PS SS         KALLQTLI SLARAISRAKTTA         QSA 
Sbjct: 10  SSSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTAF--------QSAN 69

Query: 65  IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTWDD--NSSGAADHLAGYLQWLE 124
           IA KRNK KLL+GSFRLHYNWCS SSN   HV P  LT+D         D L GYLQWLE
Sbjct: 70  IALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGIGCGAGGDQLGGYLQWLE 129

Query: 125 DRD------------KEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 159
           +RD              E+     NEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Sbjct: 130 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 181

[Close]

BLAST of CmaCh14G004270.1 vs. NCBI nr
Match: XP_022983138.1 (uncharacterized protein LOC111481779 [Cucurbita maxima])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKMVSLSPSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKR 60
           MKMVSLSPSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKR
Sbjct: 1   MKMVSLSPSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKR 60

Query: 61  NKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELCR 120
           NKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELCR
Sbjct: 61  NKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELCR 120

Query: 121 HANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 160
           HANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 HANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 159

[Close]

BLAST of CmaCh14G004270.1 vs. NCBI nr
Match: KAG6580813.1 (hypothetical protein SDJN03_20815, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017563.1 hypothetical protein SDJN02_19429, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 155/161 (96.27%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MKMVSLSP-SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSP SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNS-SGAADHLAGYLQWLEDRDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNS +GAADHLAGYLQWLEDRDKEE+L
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGAADHLAGYLQWLEDRDKEEKL 120

Query: 121 CRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 160
           CRH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161

[Close]

BLAST of CmaCh14G004270.1 vs. NCBI nr
Match: XP_023526429.1 (uncharacterized protein LOC111789933 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 154/161 (95.65%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MKMVSLSP-SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSP SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNS-SGAADHLAGYLQWLEDRDKEEEL 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNS +GAADHL GYLQWLE +DKEEEL
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEEL 120

Query: 121 CRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 160
           CRH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 CRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 161

[Close]

BLAST of CmaCh14G004270.1 vs. NCBI nr
Match: XP_022935250.1 (uncharacterized protein LOC111442186 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 155/160 (96.88%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MKMVSLSP-SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60
           MKMVSLSP SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK
Sbjct: 1   MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFK 60

Query: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEEELC 120
           RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNS  AADHLAGYLQWLEDRDKEEELC
Sbjct: 61  RNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNS--AADHLAGYLQWLEDRDKEEELC 120

Query: 121 RHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 160
           RH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Sbjct: 121 RHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 158

[Close]

BLAST of CmaCh14G004270.1 vs. NCBI nr
Match: XP_038906153.1 (uncharacterized protein LOC120092033 [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 9.0e-46
Identity = 113/169 (66.86%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 5   SLSPSSSLQIFPSSSS---------LKALLQTLILSLARAISRAKTTALHILKQANHQSA 64
           S SP SSLQI PSSSS          KA+LQTLILSLARAISRAKTTA HILKQANHQ A
Sbjct: 7   SSSPFSSLQILPSSSSPSPSSSLVKFKAVLQTLILSLARAISRAKTTAFHILKQANHQYA 66

Query: 65  IAFKRNKNKLLFGSFRLHYNWCS-SSNY---HVAPPPLTWDDNSS----GAADHLAGYLQ 124
           IA KRNK KLL+GSFRLHYNWCS SSNY   HV PP +TWD   S    G  D L GYL+
Sbjct: 67  IALKRNKKKLLYGSFRLHYNWCSVSSNYYNSHVTPPVITWDHEYSGGGGGGGDQLGGYLE 126

Query: 125 WLEDRDKEEELCRH--ANEIDKLADIFIARCHEKFRLEKQESYRKFQEM 155
           WLE+R+   ++      NEIDKLA+IFIAR HEKF+LEKQESYR+FQ+M
Sbjct: 127 WLEERENNNKIKNEEGVNEIDKLAEIFIARSHEKFKLEKQESYRRFQDM 175

[Close]

BLAST of CmaCh14G004270.1 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 5.1e-23
Identity = 75/181 (41.44%), Postives = 99/181 (54.70%), Query Frame = 0


Query: 1   MKMVSLSPSSSLQIFPSSSSLKALLQTL----ILSLARAISRAKTTALHILKQANHQS-- 60
           M++ S SPSSS     SS  LK L+Q L    +    RA+++AK+  L I K  ++    
Sbjct: 1   MQLKSSSPSSSSSSSSSSMKLKTLIQNLLTHPLYRFLRALAKAKSIFLEISKHNSNNKKR 60

Query: 61  ------AIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPP---PLTWDDNSSGAADHLAGY 120
                      +N+ K+ FGSFRLHYNWCSS    V  P   P ++ +        L+GY
Sbjct: 61  KLMMLFPTKASKNQRKIFFGSFRLHYNWCSSHVVPVPQPFPFPSSYINGEEEDDSQLSGY 120

Query: 121 LQWLEDR--DKEEELCRHA-----NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 160
           L+WLE +  D  EE+         ++ID LAD+FIA CHEKF LEK ESYR+FQEM  R 
Sbjct: 121 LEWLEHKKFDDVEEIGDVVADGGDDDIDHLADMFIANCHEKFLLEKVESYRRFQEMLERG 180

[Close]

BLAST of CmaCh14G004270.1 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20
Identity = 81/197 (41.12%), Postives = 99/197 (50.25%), Query Frame = 0


Query: 3   MVSLSPSSSLQIFPSSSSLKALLQTLILS----LARAISRAKTTALHIL--KQANHQSAI 62
           M S   SSS     SS  LK+L+QTLI+S    L R ISR  +  + +L  KQ N  S  
Sbjct: 12  MSSSQCSSSSSPTSSSMKLKSLIQTLIISQVCRLLREISRVSSILVRVLRKKQYNFLSVS 71

Query: 63  AF-------KRNKNKLLFGSFRLHYNWCSSSNYHVAPP--------------PLTWD--- 122
           +        K+ KN +LFGSFRLHYN+CSS    V+ P                TW+   
Sbjct: 72  SLLYPKRVSKKQKNNILFGSFRLHYNFCSSHVVPVSAPVRLPEELYLAHLVHESTWESMY 131

Query: 123 --------DNSSGAADHLAGYLQWLEDRDK---EEELCRHANEIDKLADIFIARCHEKFR 159
                   D+       L+ YL+ LED+ K   EEE     NEIDKLAD FIA CHEKF 
Sbjct: 132 STESMDGRDDDDQEPSQLSSYLRQLEDKVKDGQEEETETMMNEIDKLADRFIANCHEKFM 191

[Close]

BLAST of CmaCh14G004270.1 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12
Identity = 62/166 (37.35%), Postives = 79/166 (47.59%), Query Frame = 0


Query: 17  SSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNW 76
           SSSS    L+TL ++L   I+ +    L  L +A        K NK +L    F   Y  
Sbjct: 7   SSSSHSTNLKTLFINL---ITHSLYRLLRSLSRARSVLIEISKHNKKRLFMMMF---YTT 66

Query: 77  CSSSNYH-------------VAPPPLTWDDNSSGAADHLAGYLQWLEDRDKEE------- 136
            SS N H               P P + D +     +  + YLQWLE+R  E        
Sbjct: 67  KSSMNQHNIFFGSSHVVVPVTKPFPFSLDGHVEDEDNLESQYLQWLEERVDENNNINDDQ 126

Query: 137 ---ELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL 160
              E     ++ID+LAD FIARCHEKF LEK ESYR+FQ+M ARSL
Sbjct: 127 SVGERDVGDDDIDRLADKFIARCHEKFLLEKVESYRRFQDMLARSL 166

[Close]

BLAST of CmaCh14G004270.1 vs. TAIR 10
Match: AT5G47920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 4.1e-04
Identity = 19/46 (41.30%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 112 RDKEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAAR 158
           +++E E  +  +EID +AD+FI+R H++ +L+K  S++++QEM AR
Sbjct: 140 KEEEGENFKLEDEIDHVADLFISRFHKQMKLQKLLSFKRYQEMLAR 185

The following BLAST results are available for this feature:

BLAST of CmaCh14G004270.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G004270.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6X1	7.1e-81	100.00	uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779...	[more]
A0A6J1FA41	1.5e-75	96.88	uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A0A0LBV5	7.0e-36	58.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1	[more]
A0A5A7TJT8	1.6e-35	59.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8H1	1.6e-35	59.44	uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=...	[more]

BLAST of CmaCh14G004270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983138.1	1.5e-80	100.00	uncharacterized protein LOC111481779 [Cucurbita maxima]	[more]
KAG6580813.1	1.1e-75	96.27	hypothetical protein SDJN03_20815, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023526429.1	2.4e-75	95.65	uncharacterized protein LOC111789933 [Cucurbita pepo subsp. pepo]	[more]
XP_022935250.1	3.2e-75	96.88	uncharacterized protein LOC111442186 [Cucurbita moschata]	[more]
XP_038906153.1	9.0e-46	66.86	uncharacterized protein LOC120092033 [Benincasa hispida]	[more]

BLAST of CmaCh14G004270.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57950.1	5.1e-23	41.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G06790.1	3.1e-20	41.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G42180.1	4.1e-12	37.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G47920.1	4.1e-04	41.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 123..157 e-value: 5.4E-14 score: 51.5
None	No IPR available	PANTHER	PTHR33450:SF4	DUF761 DOMAIN PROTEIN	coord: 5..159
None	No IPR available	PANTHER	PTHR33450	EMB\|CAB67623.1-RELATED	coord: 5..159

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G004270	CmaCh14G004270	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004270.1:exon:2345	CmaCh14G004270.1:exon:2345	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004270.1:cds	CmaCh14G004270.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004270.1	CmaCh14G004270.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding