CmaCh14G001210.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G001210.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger protein GIS3-like
Location	Cma_Chr14: 522392 .. 524333 (+)
Sequence length	582
RNA-Seq Expression	CmaCh14G001210.1
Synteny	CmaCh14G001210.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGGAAGCAACAAGAAGAGAGACAAACACATGATTTTGATGATTCTGTGGATTCTCAATCTTCCAAAACCAAAACCCCCTTTGGATATGAGGACCCCTTCTCATGGGAAGAGCAAGCCTTTGCTGAAGATGCTGCTGGCCGCCTCGGAGGCTGCGTTTGGCCGCCACGCTCTTATTCTTGCTCCTTTTGTAGAAGAGAGTTCCGTTCAGCTCAAGCCTTGGGCGGCCACATGAATGTCCACAGACGAGATAGGGCTAGACTGAAGCAATCCCCAAGTACTCCCAATCACAACCCTTTCACTAATTCCTTCCCCTTTCATTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTACTTTTTCTCATCATCTTCCTACCCCTAAACCCTATTTGGTCCATCCACCGCCCCCGAACCGACTAACTTCAAAGGCGGGGAAAGACGAGAATTTGACAAATTCTTGCACTAGGGTTAGAGACAACGATCACGCTGGAATTGGGATTTTGGATGACGGGTTGAATTTCAGTTTCGGACCACCTTGGCCGACATCAAGTTTGTTTGACGATGACAGTGGTCGGGAGGAGGCGGGGGTGGACACCAGTTGCAAGAAGAGGAAGACGGATTGTTATTTTATTATAAGGCAAATATCTAATATTTGCTTTATTATCATAGGTATCTTTCCATTTATTGTTATTTCCATTTATTACTATTTCCATATCTTTGTAATTCATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACATGGTATCAGAGCCCTCTTGGTTTAACAACCCGATTCTTTCTTTTCAATGGCTTTTGAATCCTCTAATCTTCTTCTCCACCACCCCTGCTGGTTTTGACGCCGCAGGGGCAGTCTTCATGGCTGCCGTAGTCGGAGCCGATTGATTACTCTTCGGCTCCACCCTATTGACCTCCAAATCACCTTTCGTCATACTCTGTACATACAACCTCACCTTTTCCAACCCAATCGGTTTTCCCCTTGGCCAATATAGTCTCTCTCATTTTCTTCCCAATAAACCTTCATCCTTCACATAAACCCTAACCTAAACTTATCAACCTTTTGCAGAGATTTACCTTCGGAATATGGGTGCCGCACTGGCCTATTCGCCAACCAAGTTGCCGCCGCCCTTCCTGCCAAAATTGGCTTCTTCGCCCGATGAGGCGACTCTTCCGACTGCCCTTCTCGCCAAAATTGGCTCCTTCGCCCAATGTGGCGACTCTTCTGGCTTCAACATTGTCTTTGTCCCTTGCTCTAGGTTTCCCCTTCTACTTCTTGGGGTTAGAAATATTCTCACCAGAGCCAAGACAGCATCGTCGCTAAGCGACAATCCCTCTTCATGGGTTAGACATATTCTCGCCGAAGCCAAGGCAGCATCGCCGCTGAGCGGCGATCCCTCTGCAAATTTTTGATGACCAAGAACCGGGTTGTTAGCATCTTCATGAAAAGTGTTTCTCAACCTTTTTGAATTTTTCAGATTCAAGCTTCACGTTCGTTTAAATCCGACGCTTAGCTTGCGGTGGGGTGTTAAGGATATTTAGTAATAAATTATTGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAATATTTGCTTTATTATCATAGGTATCTTTCCATTTATTGTTATTTCCATTTATTACTATTTCCATATCTTTGTAATTCATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACAAGATCTGAGCCGTAGATGAGATCCCACTAATCTAAACCCTAGATGTGATGCATTTGGATGATTCACAAGCACAAACTCTCAACCATGTTATGTCTTTTTTAGCATCTAGGGTAAATTAGTATCCATGAATGAATTTCAACAACAAAAATGA

mRNA sequence

ATGTGGAGGAAGCAACAAGAAGAGAGACAAACACATGATTTTGATGATTCTGTGGATTCTCAATCTTCCAAAACCAAAACCCCCTTTGGATATGAGGACCCCTTCTCATGGGAAGAGCAAGCCTTTGCTGAAGATGCTGCTGGCCGCCTCGGAGGCTGCGTTTGGCCGCCACGCTCTTATTCTTGCTCCTTTTGTAGAAGAGAGTTCCGTTCAGCTCAAGCCTTGGGCGGCCACATGAATGTCCACAGACGAGATAGGGCTAGACTGAAGCAATCCCCAAGTACTCCCAATCACAACCCTTTCACTAATTCCTTCCCCTTTCATTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTACTTTTTCTCATCATCTTCCTACCCCTAAACCCTATTTGGTCCATCCACCGCCCCCGAACCGACTAACTTCAAAGGCGGGGAAAGACGAGAATTTGACAAATTCTTGCACTAGGGTTAGAGACAACGATCACGCTGGAATTGGGATTTTGGATGACGGGTTGAATTTCAGTTTCGGACCACCTTGGCCGACATCAATATCCATGAATGAATTTCAACAACAAAAATGA

Coding sequence (CDS)

ATGTGGAGGAAGCAACAAGAAGAGAGACAAACACATGATTTTGATGATTCTGTGGATTCTCAATCTTCCAAAACCAAAACCCCCTTTGGATATGAGGACCCCTTCTCATGGGAAGAGCAAGCCTTTGCTGAAGATGCTGCTGGCCGCCTCGGAGGCTGCGTTTGGCCGCCACGCTCTTATTCTTGCTCCTTTTGTAGAAGAGAGTTCCGTTCAGCTCAAGCCTTGGGCGGCCACATGAATGTCCACAGACGAGATAGGGCTAGACTGAAGCAATCCCCAAGTACTCCCAATCACAACCCTTTCACTAATTCCTTCCCCTTTCATTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTACTTTTTCTCATCATCTTCCTACCCCTAAACCCTATTTGGTCCATCCACCGCCCCCGAACCGACTAACTTCAAAGGCGGGGAAAGACGAGAATTTGACAAATTCTTGCACTAGGGTTAGAGACAACGATCACGCTGGAATTGGGATTTTGGATGACGGGTTGAATTTCAGTTTCGGACCACCTTGGCCGACATCAATATCCATGAATGAATTTCAACAACAAAAATGA

Protein sequence

MWRKQQEERQTHDFDDSVDSQSSKTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSSTFSHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGPPWPTSISMNEFQQQK

Homology

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 38 EEQAFAE-DAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTP 97
          EE+AFA  +  G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLKQ   +P
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.5e-18
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 36  SWEEQAFAEDAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPST 95
           SWEE AFAED A    G +WPPRSY+CSFCRREF+SAQALGGHMNVHRRDRARLKQ+   
Sbjct: 18  SWEELAFAEDDA---AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQ 77

Query: 96  PNHNPFTNS--FPFHSPSSSSSSSSTFS 122
                 ++S  +P H  S +   +S ++
Sbjct: 78  YLFPKSSSSPEYPSHKDSDNIHETSCYT 102

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-16
Identity = 59/118 (50.00%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 55  WPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPS----TPNHNPFTNSFPFHSP 114
           WPP++Y+CSFCRREFRSAQALGGHMNVHRRDRA+L+Q PS      +H P  N  P  + 
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNP--NF 103

Query: 115 SSSSSSSSTFSHHLP--TPKPYLVHPPPPNRL------TSKAG----KDENLTNSCTR 157
           SSSSSSS+T +H  P  T +     P P  R       TS  G    +++N +N C+R
Sbjct: 104 SSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSR 159

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.7e-15
Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 34  PFSWEEQAFAEDAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLK--Q 93
           P+S+ +    +     L G  WPPRSY+CSFC+REFRSAQALGGHMNVHRRDRARL+  Q
Sbjct: 21  PWSYGDYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ 80

Query: 94  SPSTPNHNPFTNSFPFHSP--SSSSSSSSTFSHHLP-TPKPYLVHPPPP 138
           SPS+ +    T S P+ +P  S S+ ++S   HH P T  P L  P  P
Sbjct: 81  SPSSSS----TPSPPYPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSP 125

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-08
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 58 RSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQ 92
          RSY CSFC R F +AQALGGHMN+HRRDRA+L+Q
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQ 66

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy TrEMBL
Match: A0A6J1J563 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111481853 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.7e-103
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFDDSVDSQSSKTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPRSY 60
           MWRKQQEERQTHDFDDSVDSQSSKTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPRSY
Sbjct: 1   MWRKQQEERQTHDFDDSVDSQSSKTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPRSY 60

Query: 61  SCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSSTF 120
           SCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSSTF
Sbjct: 61  SCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSSTF 120

Query: 121 SHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGPPW 180
           SHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGPPW
Sbjct: 121 SHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGPPW 180

Query: 181 PTS 184
           PTS
Sbjct: 181 PTS 183

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy TrEMBL
Match: A0A6J1F1X7 (probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=LOC111441415 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.3e-92
Identity = 170/185 (91.89%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFDDSVDSQSS--KTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPR 60
           MWRKQQEERQTHD DDSVDSQSS  KTKTPFGYEDPFSWEEQAFAEDAAG LGGCVWPPR
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFGYEDPFSWEEQAFAEDAAGGLGGCVWPPR 60

Query: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSS 120
           SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSP+TPNHNPFTNSFPF SP     SSS
Sbjct: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQSP-----SSS 120

Query: 121 TFSHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGP 180
           TFS+HLPTPKPYLVHPPPPNRLTSKAGKDENLTNSC+RVRDNDH GIGILDDGLNFSFGP
Sbjct: 121 TFSYHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCSRVRDNDHVGIGILDDGLNFSFGP 180

Query: 181 PWPTS 184
           PWP S
Sbjct: 181 PWPAS 180

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy TrEMBL
Match: A0A0A0LD32 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733980 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.2e-42
Identity = 117/200 (58.50%), Postives = 131/200 (65.50%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFD------DSVDSQSSKTKTPFGYED--PFSWEEQAFAEDAAGRLGG 60
           MWRKQ+EE +  D +      D V+ + SKTKT F YED    SWEEQAFAEDAA RLG 
Sbjct: 1   MWRKQKEEEEEEDREREKDDLDDVNFEGSKTKTSFQYEDYSLLSWEEQAFAEDAA-RLGP 60

Query: 61  CVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPST---PNHNPFTNSFP-FH 120
           CVWPP SYSCSFCRREFRSAQALGGHMNVHRRDRA L QS +    PN    TNS   F 
Sbjct: 61  CVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQ 120

Query: 121 SPSSSSSSSSTFSHHLPTPKP-YLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGI 180
           SPSSSSSS    S  LP P P   V      R  SKA   + + +SC+RVRD  H GIG+
Sbjct: 121 SPSSSSSSHHNLS-TLPNPNPSSAVTASCGGRSDSKALGKDVIGSSCSRVRDKHHVGIGV 180

Query: 181 LDDGLNF-SFGPPWPTSISM 187
           LD+GLNF  FGP  PT+ S+
Sbjct: 181 LDEGLNFGGFGPSQPTTSSL 198

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy TrEMBL
Match: A0A5A7TLB0 (Putative nucleic acid binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001450 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 113/195 (57.95%), Postives = 130/195 (66.67%), Query Frame = 0


Query: 1   MWRKQQE-------ERQTHDFDDSVDSQSSKTKTPFGYEDP--FSWEEQAFAEDAAGRLG 60
           MWRKQ+E       ER+  DFDD ++ + SKTKT F YED    SWEEQAFAEDAA RLG
Sbjct: 1   MWRKQKEEEEEEDREREKDDFDD-INVEVSKTKTSFQYEDHSLLSWEEQAFAEDAA-RLG 60

Query: 61  GCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNP---FTNSFP-F 120
            CVWPP SYSCSFCRREFRSAQALGGHMNVHRRDRA L QS S  N+NP    TN    F
Sbjct: 61  PCVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQS-SINNNNPNFASTNCLSLF 120

Query: 121 HSPSSSSSSSSTFSHHLPTPKPYLVHPPPPNRLTSKAG---KD--ENLTNSCTRVRDNDH 178
            SPSSSSS      H+L T    L +P P   +T+  G   KD  +++ +SC+RVRD   
Sbjct: 121 QSPSSSSS-----HHYLST----LPNPNPSFGVTASCGGRSKDLGKDVRSSCSRVRDKHQ 180

[Close]

BLAST of CmaCh14G001210.1 vs. ExPASy TrEMBL
Match: A0A1S4DV71 (uncharacterized protein LOC103487126 OS=Cucumis melo OX=3656 GN=LOC103487126 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 113/195 (57.95%), Postives = 130/195 (66.67%), Query Frame = 0


Query: 1   MWRKQQE-------ERQTHDFDDSVDSQSSKTKTPFGYEDP--FSWEEQAFAEDAAGRLG 60
           MWRKQ+E       ER+  DFDD ++ + SKTKT F YED    SWEEQAFAEDAA RLG
Sbjct: 1   MWRKQKEEEEEEDREREKDDFDD-INVEVSKTKTSFQYEDHSLLSWEEQAFAEDAA-RLG 60

Query: 61  GCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNP---FTNSFP-F 120
            CVWPP SYSCSFCRREFRSAQALGGHMNVHRRDRA L QS S  N+NP    TN    F
Sbjct: 61  PCVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQS-SINNNNPNFASTNCLSLF 120

Query: 121 HSPSSSSSSSSTFSHHLPTPKPYLVHPPPPNRLTSKAG---KD--ENLTNSCTRVRDNDH 178
            SPSSSSS      H+L T    L +P P   +T+  G   KD  +++ +SC+RVRD   
Sbjct: 121 QSPSSSSS-----HHYLST----LPNPNPSFGVTASCGGRSKDLGKDVRSSCSRVRDKHQ 180

[Close]

BLAST of CmaCh14G001210.1 vs. NCBI nr
Match: XP_022983195.1 (zinc finger protein GIS3-like, partial [Cucurbita maxima])

HSP 1 Score: 383.6 bits (984), Expect = 9.7e-103
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFDDSVDSQSSKTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPRSY 60
           MWRKQQEERQTHDFDDSVDSQSSKTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPRSY
Sbjct: 1   MWRKQQEERQTHDFDDSVDSQSSKTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPRSY 60

Query: 61  SCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSSTF 120
           SCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSSTF
Sbjct: 61  SCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSSTF 120

Query: 121 SHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGPPW 180
           SHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGPPW
Sbjct: 121 SHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGPPW 180

Query: 181 PTS 184
           PTS
Sbjct: 181 PTS 183

[Close]

BLAST of CmaCh14G001210.1 vs. NCBI nr
Match: XP_022934167.1 (probable transcriptional regulator RABBIT EARS [Cucurbita moschata])

HSP 1 Score: 349.0 bits (894), Expect = 2.7e-92
Identity = 170/185 (91.89%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFDDSVDSQSS--KTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPR 60
           MWRKQQEERQTHD DDSVDSQSS  KTKTPFGYEDPFSWEEQAFAEDAAG LGGCVWPPR
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFGYEDPFSWEEQAFAEDAAGGLGGCVWPPR 60

Query: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSS 120
           SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSP+TPNHNPFTNSFPF SP     SSS
Sbjct: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQSP-----SSS 120

Query: 121 TFSHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGP 180
           TFS+HLPTPKPYLVHPPPPNRLTSKAGKDENLTNSC+RVRDNDH GIGILDDGLNFSFGP
Sbjct: 121 TFSYHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCSRVRDNDHVGIGILDDGLNFSFGP 180

Query: 181 PWPTS 184
           PWP S
Sbjct: 181 PWPAS 180

[Close]

BLAST of CmaCh14G001210.1 vs. NCBI nr
Match: KAG6580524.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348.6 bits (893), Expect = 3.5e-92
Identity = 170/185 (91.89%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFDDSVDSQSS--KTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPR 60
           MWRKQQEERQTHD DDSVDSQSS  KTKTPF YEDPFSWEEQAFAEDAAG LGGCVWPPR
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFAYEDPFSWEEQAFAEDAAGGLGGCVWPPR 60

Query: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSS 120
           SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSP+TPNHNPFTNSFPF SP     SSS
Sbjct: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQSP-----SSS 120

Query: 121 TFSHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGP 180
           TFS+HLPTPKPYLVHPPPPNRLTSKAGKDENLTNSC+RVRDNDH GIGILDDGLNFSFGP
Sbjct: 121 TFSYHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCSRVRDNDHVGIGILDDGLNFSFGP 180

Query: 181 PWPTS 184
           PWPTS
Sbjct: 181 PWPTS 180

[Close]

BLAST of CmaCh14G001210.1 vs. NCBI nr
Match: KAG7017274.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 348.2 bits (892), Expect = 4.5e-92
Identity = 170/185 (91.89%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFDDSVDSQSS--KTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPR 60
           MWRKQQEERQTHD DDSVDSQSS  KTKTPFGYEDPFSWEEQAFAEDAAG LGGCVWPPR
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFGYEDPFSWEEQAFAEDAAGGLGGCVWPPR 60

Query: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSS 120
           SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSP+TPNHNPFTNSFPF SP     SSS
Sbjct: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQSP-----SSS 120

Query: 121 TFSHHLPTPKPYLVHPPPPNRLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFGP 180
           TFS+HLPTPKPYLVHPPPPNRLTSKAGKDEN TNSCTRVRDNDH GIGILDDGLNFSFGP
Sbjct: 121 TFSYHLPTPKPYLVHPPPPNRLTSKAGKDENSTNSCTRVRDNDHVGIGILDDGLNFSFGP 180

Query: 181 PWPTS 184
           PWP S
Sbjct: 181 PWPAS 180

[Close]

BLAST of CmaCh14G001210.1 vs. NCBI nr
Match: XP_023526505.1 (zinc finger protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 169/191 (88.48%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MWRKQQEERQTHDFDDSVDSQSS--KTKTPFGYEDPFSWEEQAFAEDAAGRLGGCVWPPR 60
           MWRKQQEERQTHD DDSVDSQSS  KTKTPF YEDPFSWEEQAFAEDAAG LGGCVWPPR
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKAKTKTPFAYEDPFSWEEQAFAEDAAGGLGGCVWPPR 60

Query: 61  SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTPNHNPFTNSFPFHSPSSSSSSSS 120
           SYSCSFCRR+FRSAQALGGHMNVHRRDRARLKQSP+TPNHNPFTNSFPF SP  SSSSSS
Sbjct: 61  SYSCSFCRRDFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQSP--SSSSSS 120

Query: 121 TFSHHLPTPKPYLVHPPPPN-RLTSKAGKDENLTNSCTRVRDNDHAGIGILDDGLNFSFG 180
           TFS+HLPTPKPYLVHPPPPN RLTSKAGKDEN TNSC+RV DN H GIGILDDGLNFSFG
Sbjct: 121 TFSYHLPTPKPYLVHPPPPNHRLTSKAGKDENFTNSCSRVTDNHHVGIGILDDGLNFSFG 180

Query: 181 PPWPTSISMNE 189
           PPWPTS+  ++
Sbjct: 181 PPWPTSVLFDD 189

[Close]

BLAST of CmaCh14G001210.1 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-20
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 38 EEQAFAE-DAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPSTP 97
          EE+AFA  +  G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLKQ   +P
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

[Close]

BLAST of CmaCh14G001210.1 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 32 EDPFSWEEQAFAEDAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRA 88
          +D  SWE +AF +D  G + G  WPPRSY+C+FCRREFRSAQALGGHMNVHRRDRA
Sbjct: 18 DDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

[Close]

BLAST of CmaCh14G001210.1 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-19
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 36  SWEEQAFAEDAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPST 95
           SWEE AFAED A    G +WPPRSY+CSFCRREF+SAQALGGHMNVHRRDRARLKQ+   
Sbjct: 18  SWEELAFAEDDA---AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQ 77

Query: 96  PNHNPFTNS--FPFHSPSSSSSSSSTFS 122
                 ++S  +P H  S +   +S ++
Sbjct: 78  YLFPKSSSSPEYPSHKDSDNIHETSCYT 102

[Close]

BLAST of CmaCh14G001210.1 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-17
Identity = 59/118 (50.00%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 55  WPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPS----TPNHNPFTNSFPFHSP 114
           WPP++Y+CSFCRREFRSAQALGGHMNVHRRDRA+L+Q PS      +H P  N  P  + 
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNP--NF 103

Query: 115 SSSSSSSSTFSHHLP--TPKPYLVHPPPPNRL------TSKAG----KDENLTNSCTR 157
           SSSSSSS+T +H  P  T +     P P  R       TS  G    +++N +N C+R
Sbjct: 104 SSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSR 159

[Close]

BLAST of CmaCh14G001210.1 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 34  PFSWEEQAFAEDAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLK--Q 93
           P+S+ +    +     L G  WPPRSY+CSFC+REFRSAQALGGHMNVHRRDRARL+  Q
Sbjct: 21  PWSYGDYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ 80

Query: 94  SPSTPNHNPFTNSFPFHSP--SSSSSSSSTFSHHLP-TPKPYLVHPPPP 138
           SPS+ +    T S P+ +P  S S+ ++S   HH P T  P L  P  P
Sbjct: 81  SPSSSS----TPSPPYPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSP 125

The following BLAST results are available for this feature:

BLAST of CmaCh14G001210.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS9	1.2e-18	73.77	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
O80942	4.5e-18	57.95	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9SLB8	2.5e-16	50.00	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q38895	2.7e-15	51.38	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9SR34	4.2e-08	76.47	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of CmaCh14G001210.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J563	4.7e-103	100.00	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111481853 PE=4 S...	[more]
A0A6J1F1X7	1.3e-92	91.89	probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0LD32	1.2e-42	58.50	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733980 P...	[more]
A0A5A7TLB0	1.1e-38	57.95	Putative nucleic acid binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S4DV71	1.1e-38	57.95	uncharacterized protein LOC103487126 OS=Cucumis melo OX=3656 GN=LOC103487126 PE=...	[more]

BLAST of CmaCh14G001210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983195.1	9.7e-103	100.00	zinc finger protein GIS3-like, partial [Cucurbita maxima]	[more]
XP_022934167.1	2.7e-92	91.89	probable transcriptional regulator RABBIT EARS [Cucurbita moschata]	[more]
KAG6580524.1	3.5e-92	91.89	Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7017274.1	4.5e-92	91.89	Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023526505.1	1.5e-90	88.48	zinc finger protein 10-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh14G001210.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06070.1	8.4e-20	73.77	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	1.1e-19	71.43	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	3.2e-19	57.95	zinc-finger protein 10	[more]
AT2G42410.1	1.8e-17	50.00	zinc finger protein 11	[more]
AT3G23130.1	1.9e-16	51.38	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 60..82 e-value: 0.0098 score: 25.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 62..82
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 60..87 score: 11.219034
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 60..84 e-value: 6.9E-6 score: 25.9
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 56..105 e-value: 9.4E-6 score: 27.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR45801:SF68	CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEIN	coord: 14..148
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 14..148
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 57..86

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G001210	CmaCh14G001210	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G001210.1:exon:344	CmaCh14G001210.1:exon:344	exon
CmaCh14G001210.1:exon:345	CmaCh14G001210.1:exon:345	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G001210.1:cds	CmaCh14G001210.1:cds	CDS
CmaCh14G001210.1:cds	CmaCh14G001210.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G001210.1	CmaCh14G001210.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane