CmaCh13G000990.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G000990.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Maternal effect embryo arrest 60
Location	Cma_Chr13: 714799 .. 716049 (+)
Sequence length	594
RNA-Seq Expression	CmaCh13G000990.1
Synteny	CmaCh13G000990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGTGCTTAGAGAAGTTAGGTAACGGGATATCAATAATCTAGAAGTACTCGAAAGAAGCTAGTTAGTGTAAGCTCAATCATTTAATTAGATCAAGTGAATCCCAGGATTAAGATGAGCTTAGAGATGCTATAGACTGTGAAACTGACCAATGGGTTAGGGCTTATGACGCCGGTAACGACCCATGTCCAAAATTCAAAATCCAAATTTGGCACCTGATGACTCTAACATTCCCTTGCGACATGGTCACATTACTTATTATTCGCTTTTTTAGAGTGAAGACTATCCTCACAAACCAACACGAGTCCTTACAACATGCTTTGTTTTCACTCACATGCATTTCAAGAAGATTTCTAGTAGATTACCAATATAGAATTGCTCAAAGTAAAGCACGTTTAACCATAGAATTCTTATGATCGAATCACCGAAAAGAAAGATGTATCTTATCGATATAGATTAATTTTCAATTGTTTTTAAGTATTTCTTATTTGGACGTTTATAAAATTTAAAAATAAGTTTGAGTGAGAATATTTAAAAACAAGAACAACAGTGTTCCGATTCCGACATGTTTCTAACTTGGACGCCACTTCTTTAATTGCTTCCAAGAAACACAAACTCCGCCACCAAATCAAATCAAATCAAAATTTTGAATTCTTTTATTTTATTGTCTTGATTTAGCACCTTCATCTTCGTCGCCGTCCACTGCCATGTCCGTCGTTCCACGGCGGCGATCCTCCTCGACCAGAATCCATGTCATGGCCCTCGACGGCATCGTCAACGTCAACTCCCTCTTCACCTTCGCCGTCTTCCTCGGCATCACCTGGTACCCCACCGCTGACCCCACCGTCAACCTCCTTCCCGACGATGATGACGGCCCCTGCGCCCCAGCCGCCGCTGCCGCTCAGAGCCTCATCGCCTGCCATGTGTACTCCTTCAGCTGCTTCCTCTTCTCCAGCCTAGTCGCCTCGGCGCTAAAGCAGGCTATTAGAATCATTGGCAGCGAAGATGGAGGTCATGGTGCAGTCCACGCGCCGGCGTTACGCGTGGGGATGGTGGCGTCGGCAGTCGGGTCGGTGCTCGGATGTGGGTTTTTGGTGGCGGCGCTGCTGAATTTGGTACAGATAAAGTTAGGGATTTTCGGTTGCCGACGGTGGGAAACGGTGGCGGCCGTCGTGCCGTTGGTGAGTTTGGTTCCTATGGCGCTTTTCATTTACATCGTTCTTGTTCTTCACGCCTTCACGCGCTAG

mRNA sequence

ATGGAGATGTGCTTAGAGAAGTTAGCACCTTCATCTTCGTCGCCGTCCACTGCCATGTCCGTCGTTCCACGGCGGCGATCCTCCTCGACCAGAATCCATGTCATGGCCCTCGACGGCATCGTCAACGTCAACTCCCTCTTCACCTTCGCCGTCTTCCTCGGCATCACCTGGTACCCCACCGCTGACCCCACCGTCAACCTCCTTCCCGACGATGATGACGGCCCCTGCGCCCCAGCCGCCGCTGCCGCTCAGAGCCTCATCGCCTGCCATGTGTACTCCTTCAGCTGCTTCCTCTTCTCCAGCCTAGTCGCCTCGGCGCTAAAGCAGGCTATTAGAATCATTGGCAGCGAAGATGGAGGTCATGGTGCAGTCCACGCGCCGGCGTTACGCGTGGGGATGGTGGCGTCGGCAGTCGGGTCGGTGCTCGGATGTGGGTTTTTGGTGGCGGCGCTGCTGAATTTGGTACAGATAAAGTTAGGGATTTTCGGTTGCCGACGGTGGGAAACGGTGGCGGCCGTCGTGCCGTTGGTGAGTTTGGTTCCTATGGCGCTTTTCATTTACATCGTTCTTGTTCTTCACGCCTTCACGCGCTAG

Coding sequence (CDS)

ATGGAGATGTGCTTAGAGAAGTTAGCACCTTCATCTTCGTCGCCGTCCACTGCCATGTCCGTCGTTCCACGGCGGCGATCCTCCTCGACCAGAATCCATGTCATGGCCCTCGACGGCATCGTCAACGTCAACTCCCTCTTCACCTTCGCCGTCTTCCTCGGCATCACCTGGTACCCCACCGCTGACCCCACCGTCAACCTCCTTCCCGACGATGATGACGGCCCCTGCGCCCCAGCCGCCGCTGCCGCTCAGAGCCTCATCGCCTGCCATGTGTACTCCTTCAGCTGCTTCCTCTTCTCCAGCCTAGTCGCCTCGGCGCTAAAGCAGGCTATTAGAATCATTGGCAGCGAAGATGGAGGTCATGGTGCAGTCCACGCGCCGGCGTTACGCGTGGGGATGGTGGCGTCGGCAGTCGGGTCGGTGCTCGGATGTGGGTTTTTGGTGGCGGCGCTGCTGAATTTGGTACAGATAAAGTTAGGGATTTTCGGTTGCCGACGGTGGGAAACGGTGGCGGCCGTCGTGCCGTTGGTGAGTTTGGTTCCTATGGCGCTTTTCATTTACATCGTTCTTGTTCTTCACGCCTTCACGCGCTAG

Protein sequence

MEMCLEKLAPSSSSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR

Homology

[Close]

BLAST of CmaCh13G000990.1 vs. ExPASy TrEMBL
Match: A0A6J1I4A7 (uncharacterized protein LOC111469508 OS=Cucurbita maxima OX=3661 GN=LOC111469508 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.0e-90
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP
Sbjct: 1   MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV
Sbjct: 61  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. ExPASy TrEMBL
Match: A0A6J1HPR3 (uncharacterized protein LOC111464928 OS=Cucurbita moschata OX=3662 GN=LOC111464928 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.6e-82
Identity = 166/179 (92.74%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADP VNLLPD DDGPCAP
Sbjct: 1   MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAP 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG +DG HG  +APALR+GMVASAV
Sbjct: 61  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDDGEHGVAYAPALRMGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLG   CRRWETVAA VPLVSLVPMALFIYIVLVLHAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. ExPASy TrEMBL
Match: A0A5D3BFZ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001760 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.5e-77
Identity = 154/179 (86.03%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+P  NLLPDDDDGPCA 
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           A + AQ+LIACHVYSFSCFLFSSL+ASALKQAIRII   DGG G  HA ALRVGMVASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAA VPLVSLVP+ALFIYI LV+HAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. ExPASy TrEMBL
Match: A0A1S3C532 (uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.5e-77
Identity = 154/179 (86.03%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+P  NLLPDDDDGPCA 
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           A + AQ+LIACHVYSFSCFLFSSL+ASALKQAIRII   DGG G  HA ALRVGMVASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAA VPLVSLVP+ALFIYI LV+HAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. ExPASy TrEMBL
Match: A0A0A0LV03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.9e-77
Identity = 150/179 (83.80%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+P  NLLPDDDDGPCA 
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           A + A++LIACHVYSFSCFLFSSL+ASALKQAIR+I   DGG G  HAPALRVGM+ASAV
Sbjct: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAA VPLVSLVP+ALFIYI LV+HAFTR
Sbjct: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. NCBI nr
Match: KAG7019165.1 (hypothetical protein SDJN02_18123, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-90
Identity = 182/197 (92.39%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 1   MEMCLEKLAPSSSSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPT 60
           MEMCLE+LAPSS SPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPT
Sbjct: 1   MEMCLEELAPSSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPT 60

Query: 61  ADPTVNLLPDDDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGG 120
           ADP VNLLPD DDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG +DG 
Sbjct: 61  ADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDDGE 120

Query: 121 HGAVHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLV 180
           HG  +APALR+GMVASAVGSVLGCGFLVAALLNLVQIKLG   CRRWETVAA VPLVSLV
Sbjct: 121 HGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLV 180

Query: 181 PMALFIYIVLVLHAFTR 198
           PMALFIYIVLVLHAFTR
Sbjct: 181 PMALFIYIVLVLHAFTR 197

[Close]

BLAST of CmaCh13G000990.1 vs. NCBI nr
Match: XP_022970573.1 (uncharacterized protein LOC111469508 [Cucurbita maxima])

HSP 1 Score: 339.7 bits (870), Expect = 1.6e-89
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP
Sbjct: 1   MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV
Sbjct: 61  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. NCBI nr
Match: XP_023519302.1 (uncharacterized protein LOC111782741 [Cucurbita pepo subsp. pepo] >XP_023521057.1 uncharacterized protein LOC111784653 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 5.1e-83
Identity = 168/179 (93.85%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADP VNLLPDDDDGPCAP
Sbjct: 1   MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDDDDGPCAP 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG +DG HG  +APALRVGMVASAV
Sbjct: 61  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDDGEHGVAYAPALRVGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLG   CRRWETVAA VPLVSLVPMALFIYIVLVLHAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. NCBI nr
Match: XP_022964979.1 (uncharacterized protein LOC111464928 [Cucurbita moschata] >KAG6583401.1 hypothetical protein SDJN03_19333, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 314.3 bits (804), Expect = 7.4e-82
Identity = 166/179 (92.74%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADP VNLLPD DDGPCAP
Sbjct: 1   MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAP 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG +DG HG  +APALR+GMVASAV
Sbjct: 61  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDDGEHGVAYAPALRMGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLG   CRRWETVAA VPLVSLVPMALFIYIVLVLHAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. NCBI nr
Match: XP_008457431.1 (PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncharacterized protein E5676_scaffold194G001760 [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 9.4e-77
Identity = 154/179 (86.03%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 19  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 78
           MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+P  NLLPDDDDGPCA 
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 79  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 138
           A + AQ+LIACHVYSFSCFLFSSL+ASALKQAIRII   DGG G  HA ALRVGMVASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAV 120

Query: 139 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAA VPLVSLVP+ALFIYI LV+HAFTR
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIALVIHAFTR 179

[Close]

BLAST of CmaCh13G000990.1 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 161.4 bits (407), Expect = 7.5e-40
Identity = 102/178 (57.30%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 29  STRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAPAAAAAQSLIA 88
           +T IH+ ALDGIVNVNSLFT AVF+G+ W PT DP  +L+ D +   C P A  A++L+A
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPT-DPDNSLVTDPN---CVPTARMAENLVA 61

Query: 89  CHVYSFSCFLFSSLVASALKQAIRI-IGSE-------DGGHGAVHAPALRVGMVASAVGS 148
            HVYSF+ FLFSSL+A  LKQA+R+ I S        D     V+  ALR GMV S +GS
Sbjct: 62  FHVYSFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGS 121

Query: 149 VLGCGFLVAALLNLVQIKLGIFGC-RRWETVAAVVPLVSLVPMALFIYIVLVLHAFTR 198
           V GCGFL+ AL+N+VQIKLG  GC     T AAVVPLV LVP ALFIY+ L+L+AFTR
Sbjct: 122 VCGCGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAFTR 175

[Close]

BLAST of CmaCh13G000990.1 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33
Identity = 96/196 (48.98%), Postives = 123/196 (62.76%), Query Frame = 0


Query: 18  AMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDG--- 77
           A+  + RR   +T IHV A+DGIVNVNSLF+ A+FLG+T        V+    ++     
Sbjct: 7   AVEFLRRRLLPTTLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRR 66

Query: 78  -PCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSE-------------DGG 137
              A   A A+ L++ HVYSFS FLFSSL+A +LKQAIR   +              + G
Sbjct: 67  CISAKGPALAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAG 126

Query: 138 HGAVHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGIFGCRR-WETVAAVVPLVSL 196
            G V+  ALRVG+VAS V SVLGCGFL  AL++LVQIKLG   C+R +  +AA+VPLV L
Sbjct: 127 EGRVNLAALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVL 186

[Close]

BLAST of CmaCh13G000990.1 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-27
Identity = 77/171 (45.03%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 28  SSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAPAAAAAQSLI 87
           ++T +HV ALDG+VNVNSLFT AVF+G++    A P  + L  +    C  +A  A+ L+
Sbjct: 22  ATTSVHVSALDGLVNVNSLFTIAVFVGLS---LATPGQHSL--EQRSSCDASADVAKKLL 81

Query: 88  ACHVYSFSCFLFSSLVASALKQAIRIIGSEDGG---HGAVHAPALRVGMVASAVGSVLGC 147
              V SFS FLFSSLVA  LK A+ ++ S+D        ++   LR GM+ASAVGSV+GC
Sbjct: 82  VFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGC 141

Query: 148 GFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAF 196
            FL+ +++N++QI+LG+  C       AV  LV+LV  AL IYI   ++AF
Sbjct: 142 LFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

[Close]

BLAST of CmaCh13G000990.1 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-27
Identity = 77/171 (45.03%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 28  SSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAPAAAAAQSLI 87
           ++T +HV ALDG+VNVNSLFT AVF+G++    A P  + L  +    C  +A  A+ L+
Sbjct: 22  ATTSVHVSALDGLVNVNSLFTIAVFVGLS---LATPGQHSL--EQRSSCDASADVAKKLL 81

Query: 88  ACHVYSFSCFLFSSLVASALKQAIRIIGSEDGG---HGAVHAPALRVGMVASAVGSVLGC 147
              V SFS FLFSSLVA  LK A+ ++ S+D        ++   LR GM+ASAVGSV+GC
Sbjct: 82  VFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGC 141

Query: 148 GFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVLVLHAF 196
            FL+ +++N++QI+LG+  C       AV  LV+LV  AL IYI   ++AF
Sbjct: 142 LFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

[Close]

BLAST of CmaCh13G000990.1 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-23
Identity = 70/189 (37.04%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 12  SSSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDD 71
           +SS   + S      +S+T +HV ALDGIV+ NSLFT AVF+GI++   +D T+      
Sbjct: 8   TSSNQNSNSNTSHSTTSTTSVHVTALDGIVSANSLFTVAVFVGISFDQPSDLTLT----- 67

Query: 72  DDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGH---GAVHAPA 131
           D   C+      + L+   V SF+ FLFSSLVA  +K AI ++ S++        ++   
Sbjct: 68  DRTECSAGRDVERDLVVFEVISFAFFLFSSLVAQGMKLAINLLNSKETDEVFKANINRDV 127

Query: 132 LRVGMVASAVGSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYI 191
           LR G+V +A GS+LGC FL+ ++++++Q++LG+  C     +  V+ LV LV  AL +YI
Sbjct: 128 LRFGVVGAAGGSILGCVFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYI 187

Query: 192 VLVLHAFTR 198
             V ++F +
Sbjct: 188 FTVFYSFRK 191

The following BLAST results are available for this feature:

BLAST of CmaCh13G000990.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh13G000990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4A7	8.0e-90	100.00	uncharacterized protein LOC111469508 OS=Cucurbita maxima OX=3661 GN=LOC111469508...	[more]
A0A6J1HPR3	3.6e-82	92.74	uncharacterized protein LOC111464928 OS=Cucurbita moschata OX=3662 GN=LOC1114649...	[more]
A0A5D3BFZ3	4.5e-77	86.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C532	4.5e-77	86.03	uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=...	[more]
A0A0A0LV03	5.9e-77	83.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1	[more]

BLAST of CmaCh13G000990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019165.1	1.9e-90	92.39	hypothetical protein SDJN02_18123, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022970573.1	1.6e-89	100.00	uncharacterized protein LOC111469508 [Cucurbita maxima]	[more]
XP_023519302.1	5.1e-83	93.85	uncharacterized protein LOC111782741 [Cucurbita pepo subsp. pepo] >XP_023521057....	[more]
XP_022964979.1	7.4e-82	92.74	uncharacterized protein LOC111464928 [Cucurbita moschata] >KAG6583401.1 hypothet...	[more]
XP_008457431.1	9.4e-77	86.03	PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncha...	[more]

BLAST of CmaCh13G000990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05950.1	7.5e-40	57.30	maternal effect embryo arrest 60	[more]
AT3G46890.1	1.8e-33	48.98	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]
AT3G07510.1	5.6e-27	45.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	5.6e-27	45.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G01580.1	3.7e-23	37.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33430:SF9	BNAC03G75110D PROTEIN	coord: 19..197
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 19..197

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh13G000990	CmaCh13G000990	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G000990.1:exon:268	CmaCh13G000990.1:exon:268	exon
CmaCh13G000990.1:exon:269	CmaCh13G000990.1:exon:269	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G000990.1:cds	CmaCh13G000990.1:cds	CDS
CmaCh13G000990.1:cds	CmaCh13G000990.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh13G000990.1	CmaCh13G000990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane