CmaCh12G006330.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G006330.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr12: 3358032 .. 3359136 (-)
Sequence length267
RNA-Seq ExpressionCmaCh12G006330.1
SyntenyCmaCh12G006330.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGGGATTCAACTGTACCTTTTGTACCTTTTGGTTGTCTATTCGTTAACCACATCGAACATTCGATATATTCTTTTCGGTTATCAAAGAAAATGGACCTGAAGAATCTCTTTTGCTTCGCCTTCCTAGCTACATCATAGACAACTGATGAAATGCATTAGTTCAAGGGTGAAAAGAAACATCAATCACCACGAAAGCAAAGAAGCAATAGAGATACAAGGTGAAAAGGTGCACTTTTGAATCTGAAAACACTTTATTAGTTCCTTAGAAATAAATTATTCTAGAATTTACAGAGAATAGCCCTCTTCAACTAACTCTTGATTACAAATTAAAGAATGACATTCTGCTTTCTGCCTAGAAGTTTTCACTATAAATTATCCTCTTTCTTCTTTATCTACACACCACACCCCTCATTCATGAACTGATGGATTGCCAAAGAAAAAGCAAAACACTGTCCAACTCTTCAAGTACATACAAACACAAAAGGCGATCTTTATATTTCTTTTTCTTCTGACTCTTTTCATTGTCTGTCCTTCAGACTTCCAAGGAGATTCTTGTTTTTATTGGTTTCAACTTCAAGCCCATACTTTCTGGAGACAGAAGCTCTGGAGCAATGAAAGAAGGGCTCAAGGGGCTTCTTGGGCTAACACTGATGTGAGATGGCCTATACATGCCATATCCCATGAGAAAATACTCCATAGGTATCAACATTGCATCGGGCTGCTCCTCCGTCACCATTGACCCGCATGACTGAACCTGAAAATAGCTCATTTTAATTCACCTTAGTAAAAAGCTTGCATTAAATCTCAAAAGAAAGAAGAAAAAAGTGCAACATACTTCGACAAGGGCACTATTTCTTCTGTCTAGTTTTACAGTCATGTGAAGAGCCTCTGAATGAAACGGAGACCTGTCCCCAACAAATATCAATGAACGGCACTTAAGTTTTTGCAACCCTTCTGAAATGTCAGGTCTCCTGCATTAAAGGAAAATGAAGTTCAGGCAGGAGGACCTTTGACCCAACAATTGACAAGCAAAATTTCTTTAAAGCATAAAAGAAGCATTTTACCCATTCATCGCTTCAAGAAACCTCCAGACGTTTGA

mRNA sequence

ATGGATGGGGATTCAACTACTTCCAAGGAGATTCTTGTTTTTATTGGTTTCAACTTCAAGCCCATACTTTCTGGAGACAGAAGCTCTGGAGCAATGAAAGAAGGGCTCAAGGGGCTTCTTGGGCTAACACTGATGTCTCCTGCATTAAAGGAAAATGAAGTTCAGGCAGGAGGACCTTTGACCCAACAATTGACAAGCAAAATTTCTTTAAAGCATAAAAGAAGCATTTTACCCATTCATCGCTTCAAGAAACCTCCAGACGTTTGA

Coding sequence (CDS)

ATGGATGGGGATTCAACTACTTCCAAGGAGATTCTTGTTTTTATTGGTTTCAACTTCAAGCCCATACTTTCTGGAGACAGAAGCTCTGGAGCAATGAAAGAAGGGCTCAAGGGGCTTCTTGGGCTAACACTGATGTCTCCTGCATTAAAGGAAAATGAAGTTCAGGCAGGAGGACCTTTGACCCAACAATTGACAAGCAAAATTTCTTTAAAGCATAAAAGAAGCATTTTACCCATTCATCGCTTCAAGAAACCTCCAGACGTTTGA

Protein sequence

MDGDSTTSKEILVFIGFNFKPILSGDRSSGAMKEGLKGLLGLTLMSPALKENEVQAGGPLTQQLTSKISLKHKRSILPIHRFKKPPDV
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh12G006330.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G006330.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G006330.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G006330.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh12G006330CmaCh12G006330gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G006330.1:exon:3887CmaCh12G006330.1:exon:3887exon
CmaCh12G006330.1:exon:3888CmaCh12G006330.1:exon:3888exon
CmaCh12G006330.1:exon:3889CmaCh12G006330.1:exon:3889exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G006330.1:cdsCmaCh12G006330.1:cds_3CDS
CmaCh12G006330.1:cdsCmaCh12G006330.1:cds_2CDS
CmaCh12G006330.1:cdsCmaCh12G006330.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh12G006330.1CmaCh12G006330.1-proteinpolypeptide