CmaCh12G000140.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G000140.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr12: 65054 .. 65790 (-)
Sequence length513
RNA-Seq ExpressionCmaCh12G000140.1
SyntenyCmaCh12G000140.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTCACAAAGCGAAATGAGTTTCTCCCAATCCAAAGACTCTATGTTAAAGGTCTTCAGAGCCGTTACCCGCCATTCTCGGGTGCCAGCTGTCTCGGCCCCCGCTTATTTCACTCGGGCTTATACATTTCTCCCGCACTCGCACTCTCTTCTTCAGCACATTCTCACATTAGAATGAGAGCGCTCCATCAACGCCCTCTTCCCTTCCGCGTGTTCGTTGCCCAAACCGAACGCTAGATCGTTACAAGGCTCCATCAGCGGCCTCTTCCCTTTTGAGTGTTCGTTGCCCAAACCAAACGCTAGATTGTTACCAGGCAATCGGAGGAAGAGAGAGCAGAGTTGAAAGAAGTTTCTCGCCTCGTCTCGGTGATGAAAAATAGAGGTGAAGTACCTTCATTCTGCCTTTTAGTTTTATGCGTGGTTCGGTCGCTGTTCTGGGTTTGAAATTTTAAGGGTACAGTAATGACTCTGTTCTCTCGTCTTCTGATTGCCTTCAAATTTCGTTTCAGCCTTTTAGTTTATGCGTAGTTTGATCGCTGTTTTGGGTTTGAAATTTTAAGGGTACAGTGATGATTCTGCTCTCTCTTCCTCTGATTGCCTTTAAATGTCGTTCTCAGACTTTTAGTTTTACGGGTAGTTTGGTCGCCGGTCTGAGTTTGAAATTTTATGTGTACAGTGATGATTCTGCTCTCTCTTCCTCCGATTGCCTTCAAATTTCGTTTTCAGCCTTTTAG

mRNA sequence

ATGGATGTCACAAAGCGAAATGAGTTTCTCCCAATCCAAAGACTCTATGTTAAAGGTCTTCAGAGCCGTTACCCGCCATTCTCGGGTGCCAGCTGTCTCGGCCCCCGCTTATTTCACTCGGGCTTATACATTTCTCCCGCACTCGCACTCTCTTCTTCAGCACATTCTCACATTAGAATGAGAGCGCTCCATCAACGCCCTCTTCCCTTCCGCGTGCAATCGGAGGAAGAGAGAGCAGAGTTGAAAGAAGTTTCTCGCCTCGTCTCGGTGATGAAAAATAGAGGTGAAGTACCTTCATTCTGCCTTTTAGTTTTATGCGTGGTTCGGTCGCTGTTCTGGGGTACAGTGATGATTCTGCTCTCTCTTCCTCTGATTGCCTTTAAATGTCGTTCTCAGACTTTTAGTTTTACGGGTAGTTTGGTCGCCGGTCTGAGTTTGAAATTTTATGTGTACAGTGATGATTCTGCTCTCTCTTCCTCCGATTGCCTTCAAATTTCGTTTTCAGCCTTTTAG

Coding sequence (CDS)

ATGGATGTCACAAAGCGAAATGAGTTTCTCCCAATCCAAAGACTCTATGTTAAAGGTCTTCAGAGCCGTTACCCGCCATTCTCGGGTGCCAGCTGTCTCGGCCCCCGCTTATTTCACTCGGGCTTATACATTTCTCCCGCACTCGCACTCTCTTCTTCAGCACATTCTCACATTAGAATGAGAGCGCTCCATCAACGCCCTCTTCCCTTCCGCGTGCAATCGGAGGAAGAGAGAGCAGAGTTGAAAGAAGTTTCTCGCCTCGTCTCGGTGATGAAAAATAGAGGTGAAGTACCTTCATTCTGCCTTTTAGTTTTATGCGTGGTTCGGTCGCTGTTCTGGGGTACAGTGATGATTCTGCTCTCTCTTCCTCTGATTGCCTTTAAATGTCGTTCTCAGACTTTTAGTTTTACGGGTAGTTTGGTCGCCGGTCTGAGTTTGAAATTTTATGTGTACAGTGATGATTCTGCTCTCTCTTCCTCCGATTGCCTTCAAATTTCGTTTTCAGCCTTTTAG

Protein sequence

MDVTKRNEFLPIQRLYVKGLQSRYPPFSGASCLGPRLFHSGLYISPALALSSSAHSHIRMRALHQRPLPFRVQSEEERAELKEVSRLVSVMKNRGEVPSFCLLVLCVVRSLFWGTVMILLSLPLIAFKCRSQTFSFTGSLVAGLSLKFYVYSDDSALSSSDCLQISFSAF
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh12G000140.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G000140.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G000140.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G000140.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh12G000140CmaCh12G000140gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G000140.1:exon:1154CmaCh12G000140.1:exon:1154exon
CmaCh12G000140.1:exon:1155CmaCh12G000140.1:exon:1155exon
CmaCh12G000140.1:exon:1156CmaCh12G000140.1:exon:1156exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G000140.1:cdsCmaCh12G000140.1:cds_3CDS
CmaCh12G000140.1:cdsCmaCh12G000140.1:cds_2CDS
CmaCh12G000140.1:cdsCmaCh12G000140.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh12G000140.1CmaCh12G000140.1-proteinpolypeptide