CmaCh10G008380.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGAGCAGAGCAGCGACAGCGGCTTCTCATTCCCTCATTGTTGCTTCTTCCACCGAAAATTTAGAGCTAGCAGATATTGTCCTCGGACTTCCTCTCAAGACTTTTAAAACGTGTCTGGTAGGGAGAGGTTTCTACACCCTCATAAAAAATGTTTCGTTTCCCTCTTCAATCGATGTGGGATCGCACAATCCACCTCCCCTTTGGGACCCAACGTCCTCGCTAGTATTCATTCGTCTCTCCAATCAGTGTGGGATCTCGAAATCCACTCCGTGTGGTGTCTTGCTCTGATACTATTTGTAACAACCCAAATCTACCACTAGTAGATATTGTTCTCTTTGTGCTTTCCCTTTTGGGCCTTCCCTCGAGGTTTTTAAAAGGCATTTGCTAGGGAGAGGTTTACACACTCTTATAAACAATGCTTCGTTCCCCTCTCCAATCGACATGGGATCTCACAATATAATATAAATAAGGAGCTTAGAGGGAATGGACCCAAACCATGGTAGCTTTAGACTACCTATTTAGGATTTAGCACTCTACAAAGTTCCTTAGCAACTAAATGGTAAGGTGGCAAGGACACTCACGGATGTTCTGGCTTGTTTAGAAGGCTGATTGTGAGTAGAAGATGCAATAGGGAAGCCCATTCCCAAATCCATGAATTTGTATTTATCTTGCAGGCTTCCTTGACAGAAGTAAGTTCTTGTGAGGAGAGGCTATAACCAACATTTTCATTGAAATTATTTTGTTCTTCGCATCATGAAAAGAACCCAGAATCTCATGGCTTCACTTGAATTTTTACTTGATGAAAGTTAACATTCCTGTAATTAATGTTCTTCTTTTCCTCCATTTTGTAGACGATATTTTTAACCTTTCCAATGATTTAACTGCAGGGGTTATATGGAAAGGAGACAAACTCATAGATGGCGTTCCAGAAACGCTTGATATGCTTCGATCAAAGGTATAAATATACATTTTCTAACCCACTTTTGGTAACTTATTGCCTTATGAGTGAAAACTATGCAAAACTCTGTAGTTTCCTTCAGTTGATGGATTGTTTTGCGTTTTCTTTTTTTTTTTTCTCTCTTTTTAAAAAATTTCAGGGAAAGCGATTAGTTTTTGTTACCAACAATTCGACGAAGTCGAGGAAGCAGTATGGAAAAAAGTTTGAGACACTTGGTCTTAATGTTACTGAGGTCAGTGACTTAAAAAGCTCTCAAGTTCTGTCTGAAATAGTAATGCTAAGAAAATTCGAATATTTCAGGAAGAAATTTTTGCATCATCTTTTGCTGCTGCTGCGTACTTGAAGTCCATCGATTTCCCAAAAGAGAAGAAGGTACTCGCTTGCTTTAGCTATCTTTTATACATCGTTCGGAGAGGGGAACGAAACATTCCTTATAAGAGTGTGAAAACCTCTTCCCTAGTGAAAACATTTTAAAATCTTGAGTGAAAGCCTAGAATAGAAACGAAATATTCCTTATAAGAGTGTGAAAATCTCTCCGTAGCAGACATGTTTTAAAATCTTGAGGGAAAGCCCGTGAAGGGAAAGCCCAAAGAAGACAATATCTAGTAGCGGTGGACTTGAGCTGTTACGAGATCTGAACTTATGACTTTTAACTAACATAGAAATGCCTTAACCATTGAACTTCGCTCATTTAGACATTATTTCATCCTGGACTAGTGACTTTGTGATGTCAGGTTTATGTGATTGGTGAGGATGGCATCTTGAAAGAGCTTGAACTCGCTGGATATCGGTACCTTGGTGGACCGGTATGTCCTGCCACCTCTATGTGGCCTGTTCTTATTTGCAAGTCTGTGATGCTACTTTGGCAGTGATTGGCTAGCATGATAAACGATGTTTCTTATATCATATAAACTTAAAGATTACTATAATCTGTCAGGATGGTTAGGTGTGATGTCATAGAGTAAATATGTTATGTTCTTACAGGATGATGGTGGGAAGAAGATAGATCTAAAGCCAGGCTTTCTGATGGAGCACCCATGTAACAGCTCAAGCCTACCGTTAACAAATATTGTTCTCTTTTGGCTTTCCTTCAAGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCACGTAAGGAATGTTTCGTTCCCCTCTCCAATCGATGTGAGATCTCACAATCCACTCCTCTTGAGGGCCCAACGTCCTCGCTGGTATATTGTCCGGTTGGCTCTGATACCATTTGTAATAACTCAAGTCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCCTTTTGAGCTTTCCCTCAAAGTTTTAAAATGTGTCTACTAGGGAGAAGTTTCCACACCCATATAAGGAATGTTTTATTTCCCTCTCCAATCGATGTTGGATCTCACTATCTACCCCTCTTAGGGGCTCAACGTTCTCACTAACACAACGTTTGGTGTCTTGCTCTGGTACCATTTGTAACAGTCCAAGCCCACCGCTAATAGATATTGTCCTCTTTGGACTTCCCCTCAAGGTTTTAAGACGTGTCTACTAGGGAGAGGTTTCTACACCCATATAAGGAATGCTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACACCGCCCCACCTCACCTGAACATTACATATTGTTATCCCTTGGAATACCCTTCTTCGTCACATTTCTTATCCGTTTCTTATATAAACCAAAGTGCTAAAAATAGATTGGAAGAGAGGTGTTTTGGCCCTCCCTCTTGAGATCACTCGAGCCTAGACCAACTAAACCAATGCTTTACCCACTCCTCCCATTCACTCGATTTATAACAAATCCCTACTAACCCTATTGATATTCCTAACTGTCGTTCCTATCAGTTTCATACCCTAATCTAACTCGGGCTAACTTTATTCAATCACGAATCACCTATTCGCCCTCATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCATAGTCCATGAATTTTATCTAAGCAAATTCTTATTTTTCATGAAGGTGGGAGCCGTAGTGGTCGGATTTGATCGATACTTCAACTACTACAAAGTTCAGTAAGTCCTGCATTTCATTAAACATTATTTATTAACTTGGGTCTCAGTAAGTTTGATCTCTCCTATGGAAGTGTTTGAATACAACAAATGTGTAAGAATTTGAACCTCGAACCCCATGGAATCTCAGGTATGGAACACTCTGCATACGGGAAAACCCGGGCTGCCTCTTCATTGCAACTAACCGTGATGCTGTCACGCATCTAACAGATGCGCAGGAGTGGGCAGGTTCAGTTCTCTCCCAGTTTCTCTGTTTTCTAGTACTTGGTTGGGTTTCAATTTGTTTCCTTGTGTGCATAAATCAGGTGGTGGTTCAATGGTTGGTGCTCTTTGCGGATCAACCCAACGTGAGCCATTGGTTGTTGGGAAGCCCTCAACTTTCATGATGGACTACTTAGCAAACAAGTAATGTTCATATGTTGCTAATCTGTTCAAAATTATGCATGATGTTAGATGTTTGATAAAATGTGCCTTATGGTAATTTCTGGTCTATGAAGAAAGCTGTTGACTGTTGTTCAATTTGATGTCATGTCGGGTATTGAGTATGCTCATGCAAAGCATGCTAGGAACGAAGAACAGAAGCGCAATTTGGTCTAGTCTAGGTGGAAGCATAGCTAGCAAGAATTTTCGTGTAAGATCCCACGTCGATTGGAGAAAACCTCTACCTAGCAAACACGTTGACGGCGATACATAATGTCAAAGCGAAAAATATCTGCTAGCGGTGGGTTTGAGTTGTTACAAATGGTATTAGAATTAGATACCAGGCGGTGTGCCAGCGAAGACGCTGGGTCCCAAAATCGTGAGACTGACAGTAATACGTAATGGGCAAAAGTGGACAATATCTGTTAGCAGTGGGTTTGAGTTGTTACATTTCGGATCGAACCAACATAGTTAGGTGTAAGATACATGTGTCATAAGATGATTATGGAAAGTCTCGTGGGAGGGAGGGGTGCTCTCGAACTCGCCTCGTCTATACTGTTAACTTGCATACCGATATCACTTCGAGTTCTATCGTTCTTTATTTTCTTGTATTGTTCTTGACAAATAATGTTGGTGTGATGCCAATGATAGGTTTGGGATTGAGAAGTCACAAATATGCATGGTTGGAGATAGATTAGATACTGATATTCTTTTTGGACAGAATGGTAGTTGCAAGACTCTTCTTGTTTTATCAGGTAATAAATTTACCCCTTTTGTCCCTAAATTCTTCTAAATTTCTATATTAGTCCCTGAGCGCCACGAAAACTATTCGATACGACACCTTCATCCTTTAAGGTTACATACAGAAGATTTAGTGTTGAATTTTCGATCGAACGTAGGTTCTAATAAAATGATTCACAAAGTTTAGAGATTAAACTATAACGTCGGCATTAGAAAGTTTAGAAATAAGAACGGAATGAACACGTAACTTCGATTCGATTCGATTCATTGTGGGTCTTTTTTTTCACAGGTGTTACAAGCTTGTCAACACTTCAAAGTCCCAAGAACTCAATACAAACAGATTTCTACACCAACAAGATTTCAGATTTCCTCTCCCTCAAAGCTGCCACTGTATGAGTTCTTCATAAAGACCCGAACGTCGAACGTCGAAAAGTCCCGAGTTTAAACTTTGAGCTCTATTAGCCAAATTGAATGAATTTGTTCATTTTATTTCGTGGAACTTCTCGAAATATACGTGTTGTAAGGTAGCTCATTTTTAAG ATGCTGAGCAGAGCAGCGACAGCGGCTTCTCATTCCCTCATTGTTGCTTCTTCCACCGAAAATTTAGAGCTAGCAGATATTGTCCTCGGACTTCCTCTCAAGACTTTTAAAACGTGTCTGGTAGGGAGAGGGGTTATATGGAAAGGAGACAAACTCATAGATGGCGTTCCAGAAACGCTTGATATGCTTCGATCAAAGGGAAAGCGATTAGTTTTTGTTACCAACAATTCGACGAAGTCGAGGAAGCAGTATGGAAAAAAGTTTGAGACACTTGGTCTTAATGTTACTGAGGAAGAAATTTTTGCATCATCTTTTGCTGCTGCTGCGTACTTGAAGTCCATCGATTTCCCAAAAGAGAAGAAGGTTTATGTGATTGGTGAGGATGGCATCTTGAAAGAGCTTGAACTCGCTGGATATCGGTACCTTGGTGGACCGGATGATGGTGGGAAGAAGATAGATCTAAAGCCAGGCTTTCTGATGGAGCACCCATGTAACAGCTCAAGCCTACCGTTAACAAATATTGTTCTCTTTTGGCTTTCCTTCAAGGTGGGAGCCGTAGTGGTCGGATTTGATCGATACTTCAACTACTACAAAGTTCAGTATGGAACACTCTGCATACGGGAAAACCCGGGCTGCCTCTTCATTGCAACTAACCGTGATGCTGTCACGCATCTAACAGATGCGCAGGAGTGGGCAGGTGGTGGTTCAATGGTTGGTGCTCTTTGCGGATCAACCCAACGTGAGCCATTGGTTGTTGGGAAGCCCTCAACTTTCATGATGGACTACTTAGCAAACAAGTTTGGGATTGAGAAGTCACAAATATGCATGGTTGGAGATAGATTAGATACTGATATTCTTTTTGGACAGAATGGTAGTTGCAAGACTCTTCTTGTTTTATCAGGTGTTACAAGCTTGTCAACACTTCAAAGTCCCAAGAACTCAATACAAACAGATTTCTACACCAACAAGATTTCAGATTTCCTCTCCCTCAAAGCTGCCACTGTATGAGTTCTTCATAAAGACCCGAACGTCGAACGTCGAAAAGTCCCGAGTTTAAACTTTGAGCTCTATTAGCCAAATTGAATGAATTTGTTCATTTTATTTCGTGGAACTTCTCGAAATATACGTGTTGTAAGGTAGCTCATTTTTAAG ATGCTGAGCAGAGCAGCGACAGCGGCTTCTCATTCCCTCATTGTTGCTTCTTCCACCGAAAATTTAGAGCTAGCAGATATTGTCCTCGGACTTCCTCTCAAGACTTTTAAAACGTGTCTGGTAGGGAGAGGGGTTATATGGAAAGGAGACAAACTCATAGATGGCGTTCCAGAAACGCTTGATATGCTTCGATCAAAGGGAAAGCGATTAGTTTTTGTTACCAACAATTCGACGAAGTCGAGGAAGCAGTATGGAAAAAAGTTTGAGACACTTGGTCTTAATGTTACTGAGGAAGAAATTTTTGCATCATCTTTTGCTGCTGCTGCGTACTTGAAGTCCATCGATTTCCCAAAAGAGAAGAAGGTTTATGTGATTGGTGAGGATGGCATCTTGAAAGAGCTTGAACTCGCTGGATATCGGTACCTTGGTGGACCGGATGATGGTGGGAAGAAGATAGATCTAAAGCCAGGCTTTCTGATGGAGCACCCATGTAACAGCTCAAGCCTACCGTTAACAAATATTGTTCTCTTTTGGCTTTCCTTCAAGGTGGGAGCCGTAGTGGTCGGATTTGATCGATACTTCAACTACTACAAAGTTCAGTATGGAACACTCTGCATACGGGAAAACCCGGGCTGCCTCTTCATTGCAACTAACCGTGATGCTGTCACGCATCTAACAGATGCGCAGGAGTGGGCAGGTGGTGGTTCAATGGTTGGTGCTCTTTGCGGATCAACCCAACGTGAGCCATTGGTTGTTGGGAAGCCCTCAACTTTCATGATGGACTACTTAGCAAACAAGTTTGGGATTGAGAAGTCACAAATATGCATGGTTGGAGATAGATTAGATACTGATATTCTTTTTGGACAGAATGGTAGTTGCAAGACTCTTCTTGTTTTATCAGGTGTTACAAGCTTGTCAACACTTCAAAGTCCCAAGAACTCAATACAAACAGATTTCTACACCAACAAGATTTCAGATTTCCTCTCCCTCAAAGCTGCCACTGTATGA MLSRAATAASHSLIVASSTENLELADIVLGLPLKTFKTCLVGRGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVTEEEIFASSFAAAAYLKSIDFPKEKKVYVIGEDGILKELELAGYRYLGGPDDGGKKIDLKPGFLMEHPCNSSSLPLTNIVLFWLSFKVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALCGSTQREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGSCKTLLVLSGVTSLSTLQSPKNSIQTDFYTNKISDFLSLKAATV Homology
BLAST of CmaCh10G008380.1 vs. ExPASy Swiss-Prot
Match: P0DKC3 (Phosphoglycolate phosphatase 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGLP1A PE=1 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 4.0e-139 Identity = 253/320 (79.06%), Postives = 275/320 (85.94%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy Swiss-Prot
Match: P0DKC4 (Phosphoglycolate phosphatase 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGLP1B PE=1 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 4.0e-139 Identity = 253/320 (79.06%), Postives = 275/320 (85.94%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy Swiss-Prot
Match: Q8GWU0 (Phosphoglycolate phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=PGLP2 PE=1 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.5e-101 Identity = 182/288 (63.19%), Postives = 220/288 (76.39%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy Swiss-Prot
Match: Q2T9S4 (Glycerol-3-phosphate phosphatase OS=Bos taurus OX=9913 GN=PGP PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42 Identity = 112/305 (36.72%), Postives = 163/305 (53.44%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy Swiss-Prot
Match: Q8CHP8 (Glycerol-3-phosphate phosphatase OS=Mus musculus OX=10090 GN=Pgp PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 7.8e-42 Identity = 114/305 (37.38%), Postives = 166/305 (54.43%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy TrEMBL
Match: A0A6J1JJ01 (Phosphoglycolate phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111485013 PE=3 SV=1) HSP 1 Score: 581.3 bits (1497), Expect = 2.7e-162 Identity = 302/335 (90.15%), Postives = 306/335 (91.34%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy TrEMBL
Match: A0A6J1H875 (phosphoglycolate phosphatase 1B, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461376 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 4.1e-147 Identity = 268/292 (91.78%), Postives = 271/292 (92.81%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy TrEMBL
Match: A0A6J1EBS5 (phosphoglycolate phosphatase 1B, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432559 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 1.0e-145 Identity = 264/292 (90.41%), Postives = 270/292 (92.47%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy TrEMBL
Match: A0A6J1KVP9 (phosphoglycolate phosphatase 1B, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498614 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 3.0e-145 Identity = 263/292 (90.07%), Postives = 270/292 (92.47%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. ExPASy TrEMBL
Match: A0A5D3E4Y9 (Phosphoglycolate phosphatase 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00630 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 5.1e-145 Identity = 263/292 (90.07%), Postives = 269/292 (92.12%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. NCBI nr
Match: XP_022987474.1 (phosphoglycolate phosphatase 1B, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 581.3 bits (1497), Expect = 5.5e-162 Identity = 302/335 (90.15%), Postives = 306/335 (91.34%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. NCBI nr
Match: XP_022960651.1 (phosphoglycolate phosphatase 1B, chloroplastic-like [Cucurbita moschata] >KAG6590100.1 Phosphoglycolate phosphatase 1B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 530.8 bits (1366), Expect = 8.6e-147 Identity = 268/292 (91.78%), Postives = 271/292 (92.81%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. NCBI nr
Match: XP_023515560.1 (phosphoglycolate phosphatase 1B, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 529.6 bits (1363), Expect = 1.9e-146 Identity = 267/292 (91.44%), Postives = 271/292 (92.81%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. NCBI nr
Match: KAG7023769.1 (Phosphoglycolate phosphatase 1B, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 528.5 bits (1360), Expect = 4.3e-146 Identity = 267/292 (91.44%), Postives = 270/292 (92.47%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. NCBI nr
Match: XP_022925276.1 (phosphoglycolate phosphatase 1B, chloroplastic-like [Cucurbita moschata] >KAG6588271.1 Phosphoglycolate phosphatase 1B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 526.2 bits (1354), Expect = 2.1e-145 Identity = 264/292 (90.41%), Postives = 270/292 (92.47%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. TAIR 10
Match: AT5G36790.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 495.7 bits (1275), Expect = 2.8e-140 Identity = 253/320 (79.06%), Postives = 275/320 (85.94%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. TAIR 10
Match: AT5G36700.1 (2-phosphoglycolate phosphatase 1 ) HSP 1 Score: 495.7 bits (1275), Expect = 2.8e-140 Identity = 253/320 (79.06%), Postives = 275/320 (85.94%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. TAIR 10
Match: AT5G36700.2 (2-phosphoglycolate phosphatase 1 ) HSP 1 Score: 495.7 bits (1275), Expect = 2.8e-140 Identity = 253/320 (79.06%), Postives = 275/320 (85.94%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. TAIR 10
Match: AT5G36790.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 495.7 bits (1275), Expect = 2.8e-140 Identity = 253/320 (79.06%), Postives = 275/320 (85.94%), Query Frame = 0
BLAST of CmaCh10G008380.1 vs. TAIR 10
Match: AT5G36790.3 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 495.7 bits (1275), Expect = 2.8e-140 Identity = 253/320 (79.06%), Postives = 275/320 (85.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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