CmaCh10G001560.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G001560.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type domain-containing protein
Location	Cma_Chr10: 705985 .. 707829 (-)
Sequence length	1583
RNA-Seq Expression	CmaCh10G001560.1
Synteny	CmaCh10G001560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGAAATCTCGGCCCTCTGTTTTTTGCTTATTCTGTGGAAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTTTTCTTTTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCCCTCGAAGATCTTCTCTCTCCCGGAAAATAAAAATATCCACACAAATTAGGGTTTCCTTGCGAACTTGGTTCCTTCAATTCGATTTCAACTCTCCCATCATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTTTGGCCCCAAACGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGTGAGGACTCTCTCTCTCTTTTTGTTCAAACGTAAATCTTCTCATTTTTTCTTTTAGTTTTAATGCCGGAGAGTTTTATTGTTATTTTTTTCTTTGATGGTTACTGAATTTTCCCCCCAATTTGGTCGTAATTGTTTCGGCTGGGGATTTCAGGCTAGGAACTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTATAACCACTAATTATGTTTCAATTTGTTGTTAATTGAATATATTTATGGAACCGACTTCATGCATGCGATAATTTTTATTTAATCGATTTGGGTTCACGAGTGATAGGTGCGATAAAGAACAAAAAATGGAACGAAGAAGACAATCGGCTTGATTCAGAGGTCGTCAAAACGGTGGAAGATGATAATCTTTCCTCCAAAAAAATAAATAGGAGGGAAATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCGGAGTCGCCGTCCAATAGCCCCCCTAGTATGGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGTAGTAGCAGTAGTAGTAGCTGCCGCAGCAGTTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGATGAAGAAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGCAGCATGATCAATGCTCCGAGTCTTCCCCTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGATTCGAGCATTGAGCATGGCAGAATTGCGCGGAGGGCTTCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACGTTATCAAAACAGCTTAGTTTACCGAATACAGATCGGCGTTTTGGATGTGGAAGCGTCCCTTGGGCTTGTGGTGGTGTTGTGCCTGTACCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAACTTTTTACCTTGTCCCTGTGGATTCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCGGATAACGAGACAAACGAACACAGTGGCAGCCCGACTTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTGTTAATGTACGTCTGCTCCACTTTTCTTTTCTTTTCTTTTAGTTTTCTGTCCTGCGTCTCTTGGGTACTATAGTAGTCTTGGGCTCTGATTTTCATAGTAATAGAAGTGGCATTTGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGAATTTCCTACAAGAGTGTGGTTCTTATCTTGTGGTACATTTGCCAATGTAGAGGACTTAATTCGTACTTGATATGTGAATAGACGAGATGGTATAGAAATAAATACATGGAATAATGATACAACGTTTGTTTGTTTTTCTT

mRNA sequence

AAATGAAATCTCGGCCCTCTGTTTTTTGCTTATTCTGTGGAAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTTTTCTTTTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCCCTCGAAGATCTTCTCTCTCCCGGAAAATAAAAATATCCACACAAATTAGGGTTTCCTTGCGAACTTGGTTCCTTCAATTCGATTTCAACTCTCCCATCATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTTTGGCCCCAAACGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGCTAGGAACTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTGCGATAAAGAACAAAAAATGGAACGAAGAAGACAATCGGCTTGATTCAGAGGTCGTCAAAACGGTGGAAGATGATAATCTTTCCTCCAAAAAAATAAATAGGAGGGAAATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCGGAGTCGCCGTCCAATAGCCCCCCTAGTATGGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGTAGTAGCAGTAGTAGTAGCTGCCGCAGCAGTTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGATGAAGAAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGCAGCATGATCAATGCTCCGAGTCTTCCCCTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGATTCGAGCATTGAGCATGGCAGAATTGCGCGGAGGGCTTCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACGTTATCAAAACAGCTTAGTTTACCGAATACAGATCGGCGTTTTGGATGTGGAAGCGTCCCTTGGGCTTGTGGTGGTGTTGTGCCTGTACCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAACTTTTTACCTTGTCCCTGTGGATTCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCGGATAACGAGACAAACGAACACAGTGGCAGCCCGACTTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTGTTAATGTACGTCTGCTCCACTTTTCTTTTCTTTTCTTTTAGTTTTCTGTCCTGCGTCTCTTGGGTACTATAGTAGTCTTGGGCTCTGATTTTCATAGTAATAGAAGTGGCATTTGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGAATTTCCTACAAGAGTGTGGTTCTTATCTTGTGGTACATTTGCCAATGTAGAGGACTTAATTCGTACTTGATATGTGAATAGACGAGATGGTATAGAAATAAATACATGGAATAATGATACAACGTTTGTTTGTTTTTCTT

Coding sequence (CDS)

ATGAAATCTCGGCCCTCTGTTTTTTGCTTATTCTGTGGAAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTTTTCTTTTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCCCTCGAAGATCTTCTCTCTCCCGGAAAATAAAAATATCCACACAAATTAGGGTTTCCTTGCGAACTTGGTTCCTTCAATTCGATTTCAACTCTCCCATCATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTTTGGCCCCAAACGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGCTAGGAACTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTGCGATAAAGAACAAAAAATGGAACGAAGAAGACAATCGGCTTGATTCAGAGGTCGTCAAAACGGTGGAAGATGATAATCTTTCCTCCAAAAAAATAAATAGGAGGGAAATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCGGAGTCGCCGTCCAATAGCCCCCCTAGTATGGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGTAGTAGCAGTAGTAGTAGCTGCCGCAGCAGTTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGATGAAGAAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGCAGCATGATCAATGCTCCGAGTCTTCCCCTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGATTCGAGCATTGAGCATGGCAGAATTGCGCGGAGGGCTTCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACGTTATCAAAACAGCTTAGTTTACCGAATACAGATCGGCGTTTTGGATGTGGAAGCGTCCCTTGGGCTTGTGGTGGTGTTGTGCCTGTACCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAACTTTTTACCTTGTCCCTGTGGATTCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCGGATAACGAGACAAACGAACACAGTGGCAGCCCGACTTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG

Protein sequence

MKSRPSVFCLFCGKERAKQRSFRYPFFFSLSLSLSFSPPRRSSLSRKIKISTQIRVSLRTWFLQFDFNSPIMVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEEDNRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS

Homology

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BLAST of CmaCh10G001560.1 vs. ExPASy Swiss-Prot
Match: O95628 (CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3)

HSP 1 Score: 78.2 bits (191), Expect = 2.5e-13
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 341 PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 395
           P  CP+C E L++ D NF PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy Swiss-Prot
Match: Q8BT14 (CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 2.5e-13
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 341 PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 395
           P  CP+C E L++ D NF PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy Swiss-Prot
Match: P34909 (General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT2 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-12
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 344 CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL---EEDGRCPGCRKPYD 391
           CP+C E +D+TD NF PCPCG+++C FC+  I    E +GRCP CR+ YD
Sbjct: 33  CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD 82

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy Swiss-Prot
Match: Q09818 (Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-10
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 344 CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD 393
           CP+C E++D++D NF PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Sbjct: 18  CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLYTEE 67

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy Swiss-Prot
Match: Q9M9M4 (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana OX=3702 GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.6e-04
Identity = 23/68 (33.82%), Postives = 32/68 (47.06%), Query Frame = 0


Query: 352 DLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPY-DRDPADNETNEHSGSPTFPLA 411
           D    + LPC C F++C  C    ++  G CPGC++PY + D AD   N     P  P  
Sbjct: 142 DERGQDLLPCECDFKICRDCFMDAVKTGGMCPGCKEPYRNTDLADFADNNKQQRPMLPPP 201

Query: 412 RSCSMISR 419
              S + R
Sbjct: 202 AGGSKMDR 209

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy TrEMBL
Match: A0A6J1JM47 (uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 9.3e-197
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 251
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 252 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 311
           ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 312 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 371
           LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 372 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy TrEMBL
Match: A0A6J1E1T5 (uncharacterized protein LOC111430021 OS=Cucurbita moschata OX=3662 GN=LOC111430021 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.1e-189
Identity = 335/348 (96.26%), Postives = 342/348 (98.28%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW++ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDSEVVKTVEDD L SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 251
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 252 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 311
           ESSPRGDVVSQLGSC DSRNELGVGDGDSSIEHGRI RRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCVDSRNELGVGDGDSSIEHGRIVRRASMNGRAWRPDDADRPQSLPT 240

Query: 312 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 371
           LSKQLSLPNTDRRFGCG +PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 372 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy TrEMBL
Match: A0A1S3BVJ1 (uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.5e-170
Identity = 309/349 (88.54%), Postives = 325/349 (93.12%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDS V+KT +DDNLSS+KIN REIGEE+DRSVHHHSD S+SPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEE-DDDCLEDWEAFADTLIATDKQHDQC 251
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE DDDCL+DWEA AD L ATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 252 SESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLP 311
           SESSPRG+VVSQL SCGD RNELGVGDGDS++E GRI +RASMN RAWRPDDA RPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 312 TLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF 371
           TLSKQLSLPNTDRRFGCG VPWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 372 CHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISRS 349

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy TrEMBL
Match: A0A5A7UPV5 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002030 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 3.3e-170
Identity = 308/348 (88.51%), Postives = 324/348 (93.10%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDS V+KT +DDNLSS+KIN REIGEE+DRSVHHHSD S+SPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEE-DDDCLEDWEAFADTLIATDKQHDQC 251
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE DDDCL+DWEA AD L ATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 252 SESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLP 311
           SESSPRG+VVSQL SCGD RNELGVGDGDS++E GRI +RASMN RAWRPDDA RPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 312 TLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF 371
           TLSKQLSLPNTDRRFGCG VPWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 372 CHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISR 419
           CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMISR
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISR 348

[Close]

BLAST of CmaCh10G001560.1 vs. ExPASy TrEMBL
Match: A0A5D3BIS7 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002110 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 1.3e-169
Identity = 307/347 (88.47%), Postives = 323/347 (93.08%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDS V+KT +DDNLSS+KIN REIGEE+DRSVHHHSD S+SPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEE-DDDCLEDWEAFADTLIATDKQHDQC 251
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE DDDCL+DWEA AD L ATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 252 SESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLP 311
           SESSPRG+VVSQL SCGD RNELGVGDGDS++E GRI +RASMN RAWRPDDA RPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 312 TLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF 371
           TLSKQLSLPNTDRRFGCG VPWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 372 CHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMIS 418
           CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of CmaCh10G001560.1 vs. NCBI nr
Match: XP_022988378.1 (uncharacterized protein LOC111485637 [Cucurbita maxima])

HSP 1 Score: 696.0 bits (1795), Expect = 1.9e-196
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 251
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 252 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 311
           ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 312 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 371
           LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 372 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348

[Close]

BLAST of CmaCh10G001560.1 vs. NCBI nr
Match: XP_023516237.1 (uncharacterized protein LOC111780152 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 681.4 bits (1757), Expect = 4.9e-192
Identity = 341/348 (97.99%), Postives = 344/348 (98.85%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW+EED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRL+SEVVKTVEDD LSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPS+GSSILGGND
Sbjct: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 251
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 252 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 311
           ESSPRGDVVSQLGSC DSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 312 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 371
           LSKQLSLPNTDRRFGCG VPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 372 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348

[Close]

BLAST of CmaCh10G001560.1 vs. NCBI nr
Match: KAG6589475.1 (CCR4-NOT transcription complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 677.2 bits (1746), Expect = 9.3e-191
Identity = 336/348 (96.55%), Postives = 344/348 (98.85%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW++ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDSEVVKTVEDD L SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 251
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 252 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 311
           ESSPRGDVVSQLGSCGDSRNELG+GDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 312 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 371
           LSKQLSLPNTDRRFGCG +PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 372 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of CmaCh10G001560.1 vs. NCBI nr
Match: KAG7023160.1 (CCR4-NOT transcription complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 675.2 bits (1741), Expect = 3.5e-190
Identity = 335/348 (96.26%), Postives = 344/348 (98.85%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW++ED
Sbjct: 1   MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDSEVVKTVEDD L SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 251
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 252 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 311
           ESSPRGDVVSQLGSCGDSRNELG+GDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 312 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 371
           LSKQLSLPNTDRRFGCG +PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 372 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of CmaCh10G001560.1 vs. NCBI nr
Match: XP_022921889.1 (uncharacterized protein LOC111430021 [Cucurbita moschata])

HSP 1 Score: 672.5 bits (1734), Expect = 2.3e-189
Identity = 335/348 (96.26%), Postives = 342/348 (98.28%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW++ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
           NRLDSEVVKTVEDD L SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 251
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 252 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 311
           ESSPRGDVVSQLGSC DSRNELGVGDGDSSIEHGRI RRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCVDSRNELGVGDGDSSIEHGRIVRRASMNGRAWRPDDADRPQSLPT 240

Query: 312 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 371
           LSKQLSLPNTDRRFGCG +PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 372 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of CmaCh10G001560.1 vs. TAIR 10
Match: AT5G62910.1 (RING/U-box superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-64
Identity = 168/354 (47.46%), Postives = 213/354 (60.17%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 131
           M+TDSI NAS + AP  RD    KKR  +++K+KQ+KL +RREQWLS+ A+ NK+  EE 
Sbjct: 1   MITDSITNASATSAP--RDSG-KKKRNNKSAKMKQNKLGLRREQWLSQVAVSNKEVKEE- 60

Query: 132 NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 191
                 V ++ +  + SS K+ RRE       ++ HH    ESPSNS        +GG  
Sbjct: 61  ----RSVNRSQKPHHESSDKV-RREEDNNGGNNLLHHESFMESPSNSS-------VGGTY 120

Query: 192 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEE-DEEDDDCLEDWEAFADTLIATD--KQHD 251
           S  +F+G SS SS  SSSSG  SG+ITEEE  D++DD C++DWEA AD L A +  ++  
Sbjct: 121 SSTNFSGRSSRSS--SSSSGFCSGNITEEENVDDDDDGCVDDWEAVADALAAEEEIEKKS 180

Query: 252 QCSESSPRGDVVSQLGS--CGDSRNELG--VGDGDSSIEHGRIARRASMNGRAWRPDDAD 311
           +  ES      V Q  S  C  S ++    VG  D   E  R++ R   + RAWR DD  
Sbjct: 181 RPLESVKEQVSVGQSASNVCDSSISDASDVVGVEDPKQECLRVSSRKQTSNRAWRLDDDL 240

Query: 312 RPQSLPTLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCG 371
           RPQ LP L+KQLS P  D+RF            V +P+SCPIC+EDLDLTDSNFLPCPCG
Sbjct: 241 RPQGLPNLAKQLSFPELDKRFSS----------VAIPSSCPICYEDLDLTDSNFLPCPCG 300

Query: 372 FRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISR 419
           FRLCLFCHK I + DGRCPGCRKPY+R+    ET+   G  T  LARS SM  +
Sbjct: 301 FRLCLFCHKTICDGDGRCPGCRKPYERNMVKAETSIQGGGLTIRLARSSSMFCK 326

[Close]

BLAST of CmaCh10G001560.1 vs. TAIR 10
Match: AT3G48070.1 (RING/U-box superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-64
Identity = 167/358 (46.65%), Postives = 207/358 (57.82%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNK--KWNE 131
           M++DSI NAS + AP ARD    KKR  R++KLKQSKL +RREQWLS+ A+ NK  K   
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEM 60

Query: 132 EDNRLDSEVVKTVEDDNLSSKKINRREIG------EEDDRSVHHHSDCSESPSNSPPSMG 191
           E NR             + S+K ++R++       +ED+   H H    ES SNSP    
Sbjct: 61  ESNR------------RIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP---- 120

Query: 192 SSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIAT 251
           +SIL G +S  +F+ SSS     S S G  SG+IT EEED +DD CL+DWEA AD L A 
Sbjct: 121 NSILSGMNSIPNFSSSSS-----SGSGGSCSGNIT-EEEDADDDGCLDDWEAIADALAAD 180

Query: 252 DKQHDQCS--ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPD 311
           D++H++ +  ES    + + Q    G +   L     DS        RR   + +AWRPD
Sbjct: 181 DEKHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQ-------RRKQKSNQAWRPD 240

Query: 312 DADRPQSLPTLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPC 371
           D  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDSNFLPC
Sbjct: 241 DKLRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPC 300

Query: 372 PCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 420
           PCGFRLCLFCHK I + DGRCPGCRKPY+R+    E +   G  T  LARS SM  RS
Sbjct: 301 PCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRS 319

[Close]

BLAST of CmaCh10G001560.1 vs. TAIR 10
Match: AT3G48070.2 (RING/U-box superfamily protein )

HSP 1 Score: 242.3 bits (617), Expect = 7.1e-64
Identity = 166/357 (46.50%), Postives = 206/357 (57.70%), Query Frame = 0


Query: 72  MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNK--KWNE 131
           M++DSI NAS + AP ARD    KKR  R++KLKQSKL +RREQWLS+ A+ NK  K   
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEM 60

Query: 132 EDNRLDSEVVKTVEDDNLSSKKINRREIG------EEDDRSVHHHSDCSESPSNSPPSMG 191
           E NR             + S+K ++R++       +ED+   H H    ES SNSP    
Sbjct: 61  ESNR------------RIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP---- 120

Query: 192 SSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIAT 251
           +SIL G +S  +F+ SSS     S S G  SG+IT EEED +DD CL+DWEA AD L A 
Sbjct: 121 NSILSGMNSIPNFSSSSS-----SGSGGSCSGNIT-EEEDADDDGCLDDWEAIADALAAD 180

Query: 252 DKQHDQCS--ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPD 311
           D++H++ +  ES    + + Q    G +   L     DS        RR   + +AWRPD
Sbjct: 181 DEKHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQ-------RRKQKSNQAWRPD 240

Query: 312 DADRPQSLPTLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPC 371
           D  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDSNFLPC
Sbjct: 241 DKLRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPC 300

Query: 372 PCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISR 419
           PCGFRLCLFCHK I + DGRCPGCRKPY+R+    E +   G  T  LARS SM  R
Sbjct: 301 PCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCR 318

[Close]

BLAST of CmaCh10G001560.1 vs. TAIR 10
Match: AT1G74870.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 3.2e-16
Identity = 94/329 (28.57%), Postives = 147/329 (44.68%), Query Frame = 0


Query: 94  SKKRRAR-NSKLKQSKLDVRREQWLSRGAIKNKKWNEEDNRLDSEVVKTVEDDNLSSKKI 153
           SKKR+A    KLKQ K+D RR+QW+S+    N    E   RL S + K      L+ +K 
Sbjct: 20  SKKRKANWFCKLKQWKIDARRKQWISQWKKANVDEEEIGRRLRSLLEK------LTDQKA 79

Query: 154 NRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGNDSGHHFTGSSSSSSCRSSSSGC 213
            R +  +++D  +    + + S ++SP    +S+L   DS              S    C
Sbjct: 80  WRIDYDDDEDDEI--DLERTSSFASSP----TSVLKRKDS-------------VSGDCFC 139

Query: 214 RSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRNE 273
            S  +TEEEE E  DD  ++W+ F D L + +  +++ S       +V++     D   E
Sbjct: 140 CSKQMTEEEE-EVFDDAYDNWDGFKDALNSFENDNNESSR------LVTE-----DFEQE 199

Query: 274 LGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGSVPW 333
                 D+S    +  + A+   +           ++   S +    N++++ G G    
Sbjct: 200 EEDLIPDTSQRMNKCKQEAAPGNQT----------TIHRNSNKKKRSNSEKQRGDGD--- 259

Query: 334 ACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPYDR- 393
                      CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y + 
Sbjct: 260 ---------EECPICSELMDATDLEFEPCTCGFRICLFCHNKISENEARCPACRKDYKKT 289

Query: 394 -DPADNETNEHSGSPTFPLARSCSMISRS 420
              +     +  G  T PL+ S   + R+
Sbjct: 320 SKKSGEVGYQQRGRGTIPLSPSFRGLDRA 289

[Close]

BLAST of CmaCh10G001560.1 vs. TAIR 10
Match: AT3G45630.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-11
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 343 SCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD 393
           +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Sbjct: 8   TCPLCAEEMDLTDQQLKPCKCGYQICVWCWHHIMDMAEKDQSEGRCPACRTPYDKE 63

The following BLAST results are available for this feature:

BLAST of CmaCh10G001560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O95628	2.5e-13	54.55	CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 S...	[more]
Q8BT14	2.5e-13	54.55	CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 ...	[more]
P34909	3.6e-12	54.00	General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisia...	[more]
Q09818	1.5e-10	50.00	Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharo...	[more]
Q9M9M4	3.6e-04	33.82	Cellulose synthase-like protein D3 OS=Arabidopsis thaliana OX=3702 GN=CSLD3 PE=1...	[more]

BLAST of CmaCh10G001560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JM47	9.3e-197	100.00	uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637...	[more]
A0A6J1E1T5	1.1e-189	96.26	uncharacterized protein LOC111430021 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]
A0A1S3BVJ1	1.5e-170	88.54	uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=...	[more]
A0A5A7UPV5	3.3e-170	88.51	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BIS7	1.3e-169	88.47	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmaCh10G001560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988378.1	1.9e-196	100.00	uncharacterized protein LOC111485637 [Cucurbita maxima]	[more]
XP_023516237.1	4.9e-192	97.99	uncharacterized protein LOC111780152 [Cucurbita pepo subsp. pepo]	[more]
KAG6589475.1	9.3e-191	96.55	CCR4-NOT transcription complex subunit 4, partial [Cucurbita argyrosperma subsp....	[more]
KAG7023160.1	3.5e-190	96.26	CCR4-NOT transcription complex subunit 4 [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022921889.1	2.3e-189	96.26	uncharacterized protein LOC111430021 [Cucurbita moschata]	[more]

BLAST of CmaCh10G001560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62910.1	1.9e-64	47.46	RING/U-box superfamily protein	[more]
AT3G48070.1	2.4e-64	46.65	RING/U-box superfamily protein	[more]
AT3G48070.2	7.1e-64	46.50	RING/U-box superfamily protein	[more]
AT1G74870.1	3.2e-16	28.57	RING/U-box superfamily protein	[more]
AT3G45630.1	1.4e-11	42.86	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 340..403 e-value: 1.0E-19 score: 71.6
None	No IPR available	PFAM	PF14570	zf-RING_4	coord: 344..390 e-value: 3.3E-19 score: 68.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..268
None	No IPR available	PANTHER	PTHR12603:SF7	RING/U-BOX SUPERFAMILY PROTEIN	coord: 79..417
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 342..394
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 79..417
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 344..386 score: 9.700961
IPR039515	NOT4, modified RING finger, HC subclass (C4C4-type)	CDD	cd16618	mRING-HC-C4C4_CNOT4	coord: 344..387 e-value: 1.13614E-19 score: 79.966

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh10G001560	CmaCh10G001560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G001560.1:exon:442	CmaCh10G001560.1:exon:442	exon
CmaCh10G001560.1:exon:441	CmaCh10G001560.1:exon:441	exon
CmaCh10G001560.1:exon:440	CmaCh10G001560.1:exon:440	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G001560.1:three_prime_utr	CmaCh10G001560.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G001560.1:cds	CmaCh10G001560.1:cds_3	CDS
CmaCh10G001560.1:cds	CmaCh10G001560.1:cds_2	CDS
CmaCh10G001560.1:cds	CmaCh10G001560.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G001560.1:five_prime_utr	CmaCh10G001560.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh10G001560.1	CmaCh10G001560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity