CmaCh09G006760.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G006760.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Non-specific serine/threonine protein kinase
Location	Cma_Chr09: 3191710 .. 3192551 (+)
Sequence length	294
RNA-Seq Expression	CmaCh09G006760.1
Synteny	CmaCh09G006760.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGATCAACATTGCTCTCCTCTGCACCAATGTGTCTTTTTCGGCGAGACCAACCATGTCATCGGTGGTGAGCATGCTGGAAGGTAAGGCTGCTGTCGAGGAATTGACCACAAATCCAAATGACTTAAGAGAAGAGATCAACGCAATGTGGAGCCTTATGCAGCAGAACCATAAAATGATTGATAACGACTGCCACAGTTAGAGTGTATCGTCTATGGACATGCCATCTACCAATCCTTCGTCATCTTTTTGACTGGAAATTAGATTCTAAAACTCCGTTAGTAATGCTTTAAATAAGGTTTCAATTTTCTTTTATTTTGGTTAGTTTCTTCTCCGTATTTAAGAAAAGTCGATAGTTGTATTTAAACAAAGCTTAGACATGATGGCTGCCGGAATCAACTATGATTAGACTGAACATGGTTTTTGGTCTCTATTTACCAGGTGGTGTCCTCCAAACACCATCATGCTTATTATTGGCTTCATAATTTGGTAGAATCCAATCCAGAGTTCCTTTTTTAGGTTACATTTGAGTTCCTAAGTTTTTCTGAACTCAACAATTTTAGTAGCATTTGTTTAGCCCTTAGGAAATCTGAGTTCGTGTATTGTCTACTTAAACCGTCATAACTGCTTGACAACACCATCATTCAAAACTTTTGGCCACTTCGACACCAAGAAAAATTCCTCTTAGTAGGGAACTCAATCAACAAATGTAACGAAAATCACTATTGCAACCAACCTTCAACAGAACAAGATTCAAAAATTTGCTCTTATGAGTTAATAACTTTGAAGAATTTGGAATCAAATTACAGATCAAATACAGACGTCAAATCGAGCTGA

mRNA sequence

ATGGCTATGATCAACATTGCTCTCCTCTGCACCAATGTGTCTTTTTCGGCGAGACCAACCATGTCATCGGTGGTGAGCATGCTGGAAGGTAAGGCTGCTGTCGAGGAATTGACCACAAATCCAAATGACTTAAGAGAAGAGATCAACGCAATGTGGAGCCTTATGCAGCAGAACCATAAAATGATTGATAACGACTGCCACAAACAAGATTCAAAAATTTGCTCTTATGAGTTAATAACTTTGAAGAATTTGGAATCAAATTACAGATCAAATACAGACGTCAAATCGAGCTGA

Coding sequence (CDS)

ATGGCTATGATCAACATTGCTCTCCTCTGCACCAATGTGTCTTTTTCGGCGAGACCAACCATGTCATCGGTGGTGAGCATGCTGGAAGGTAAGGCTGCTGTCGAGGAATTGACCACAAATCCAAATGACTTAAGAGAAGAGATCAACGCAATGTGGAGCCTTATGCAGCAGAACCATAAAATGATTGATAACGACTGCCACAAACAAGATTCAAAAATTTGCTCTTATGAGTTAATAACTTTGAAGAATTTGGAATCAAATTACAGATCAAATACAGACGTCAAATCGAGCTGA

Protein sequence

MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHKMIDNDCHKQDSKICSYELITLKNLESNYRSNTDVKSS

Homology

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy Swiss-Prot
Match: C0LGE0 (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.4e-06
Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPN 43
           M M+N+AL+CTN S + RPTMS VVS++EGK A++EL ++P+
Sbjct: 923 MLMLNVALMCTNASPTLRPTMSQVVSLIEGKTAMQELLSDPS 964

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.4e-04
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVE 36
           M M+NIALLCTN S + RP MSSVVSMLEGK  V+
Sbjct: 913 MRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQ 947

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 5.4e-04
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVE 36
           M M+NIALLCTN S + RP MSSVVSML+GK  V+
Sbjct: 911 MRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQ 945

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy TrEMBL
Match: A0A6J1FC62 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111442709 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 924 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 983

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 984 MIDNDCHSKSA 994

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy TrEMBL
Match: A0A6J1F725 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111442709 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 913 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 972

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 973 MIDNDCHSKSA 983

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy TrEMBL
Match: A0A6J1F6X4 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111442709 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 899 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 958

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 959 MIDNDCHSKSA 969

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy TrEMBL
Match: A0A6J1F663 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111442709 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 922 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 981

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 982 MIDNDCHSKSA 992

[Close]

BLAST of CmaCh09G006760.1 vs. ExPASy TrEMBL
Match: A0A6J1BXW4 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006465 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16
Identity = 48/65 (73.85%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMI IALLCTNVS SARPTMSSVVSMLEGKAAV+EL ++P+D+R+E++AMW+L+QQN K
Sbjct: 906 MAMIKIALLCTNVSPSARPTMSSVVSMLEGKAAVKELVSDPDDMRKEMSAMWTLIQQNEK 965

Query: 61  MIDND 66
           + DN+
Sbjct: 966 ITDNE 970

[Close]

BLAST of CmaCh09G006760.1 vs. NCBI nr
Match: XP_022935964.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X4 [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 8.8e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 899 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 958

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 959 MIDNDCHSKSA 969

[Close]

BLAST of CmaCh09G006760.1 vs. NCBI nr
Match: XP_022935960.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 8.8e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 924 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 983

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 984 MIDNDCHSKSA 994

[Close]

BLAST of CmaCh09G006760.1 vs. NCBI nr
Match: XP_022935961.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X2 [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 8.8e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 922 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 981

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 982 MIDNDCHSKSA 992

[Close]

BLAST of CmaCh09G006760.1 vs. NCBI nr
Match: XP_022935962.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X3 [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 8.8e-28
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK
Sbjct: 913 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 972

Query: 61  MIDNDCHKQDS 72
           MIDNDCH + +
Sbjct: 973 MIDNDCHSKSA 983

[Close]

BLAST of CmaCh09G006760.1 vs. NCBI nr
Match: XP_023536469.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.3 bits (321), Expect = 3.7e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWSLMQQNHK 60
           MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMW LMQQNHK
Sbjct: 902 MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPNDLREEINAMWRLMQQNHK 961

Query: 61  MIDNDCH 68
           MIDN CH
Sbjct: 962 MIDNGCH 968

[Close]

BLAST of CmaCh09G006760.1 vs. TAIR 10
Match: AT1G07650.1 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07
Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPN 43
           M M+N+AL+CTN S + RPTMS VVS++EGK A++EL ++P+
Sbjct: 923 MLMLNVALMCTNASPTLRPTMSQVVSLIEGKTAMQELLSDPS 964

[Close]

BLAST of CmaCh09G006760.1 vs. TAIR 10
Match: AT1G07650.2 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07
Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVEELTTNPN 43
           M M+N+AL+CTN S + RPTMS VVS++EGK A++EL ++P+
Sbjct: 929 MLMLNVALMCTNASPTLRPTMSQVVSLIEGKTAMQELLSDPS 970

[Close]

BLAST of CmaCh09G006760.1 vs. TAIR 10
Match: AT1G53430.1 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVE 36
           M M+NIALLCTN S + RP MSSVVSMLEGK  V+
Sbjct: 905 MRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQ 939

[Close]

BLAST of CmaCh09G006760.1 vs. TAIR 10
Match: AT1G53430.2 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVE 36
           M M+NIALLCTN S + RP MSSVVSMLEGK  V+
Sbjct: 872 MRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQ 906

[Close]

BLAST of CmaCh09G006760.1 vs. TAIR 10
Match: AT1G53440.1 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 45.1 bits (105), Expect = 3.8e-05
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MAMINIALLCTNVSFSARPTMSSVVSMLEGKAAVE 36
           M M+NIALLCTN S + RP MSSVVSML+GK  V+
Sbjct: 911 MRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQ 945

The following BLAST results are available for this feature:

BLAST of CmaCh09G006760.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0LGE0	3.4e-06	57.14	Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidop...	[more]
C0LGG8	2.4e-04	71.43	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidop...	[more]
C0LGG9	5.4e-04	68.57	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidop...	[more]

BLAST of CmaCh09G006760.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC62	4.3e-28	94.37	Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1F725	4.3e-28	94.37	Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1F6X4	4.3e-28	94.37	Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1F663	4.3e-28	94.37	Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1BXW4	1.3e-16	73.85	Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of CmaCh09G006760.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935964.1	8.8e-28	94.37	probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X4 ...	[more]
XP_022935960.1	8.8e-28	94.37	probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 ...	[more]
XP_022935961.1	8.8e-28	94.37	probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X2 ...	[more]
XP_022935962.1	8.8e-28	94.37	probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X3 ...	[more]
XP_023536469.1	3.7e-26	97.01	probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X4 ...	[more]

BLAST of CmaCh09G006760.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07650.1	2.4e-07	57.14	Leucine-rich repeat transmembrane protein kinase	[more]
AT1G07650.2	2.4e-07	57.14	Leucine-rich repeat transmembrane protein kinase	[more]
AT1G53430.1	1.7e-05	71.43	Leucine-rich repeat transmembrane protein kinase	[more]
AT1G53430.2	1.7e-05	71.43	Leucine-rich repeat transmembrane protein kinase	[more]
AT1G53440.1	3.8e-05	68.57	Leucine-rich repeat transmembrane protein kinase	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh09G006760	CmaCh09G006760	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G006760.1:exon:657	CmaCh09G006760.1:exon:657	exon
CmaCh09G006760.1:exon:656	CmaCh09G006760.1:exon:656	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G006760.1:cds	CmaCh09G006760.1:cds	CDS
CmaCh09G006760.1:cds	CmaCh09G006760.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh09G006760.1	CmaCh09G006760.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0106310	protein serine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004712	protein serine/threonine/tyrosine kinase activity