CmaCh09G000560.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G000560.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr09: 255430 .. 256284 (+)
Sequence length213
RNA-Seq ExpressionCmaCh09G000560.1
SyntenyCmaCh09G000560.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAATGAAAAAATCGAAGGCAAAGAATCGATGTATGAAAATCGATTAGAAATTCAAATGATATCTGTAAGGTGAATCAAATTTTTGTTTGACAACGAAATGACGAATTGGAGTTCTGGATAATCGATTCGATCGTCCTGTCGATTAGCCGAGTAGATAGCCATGCCACGCACTTGATCTCAGTTTGTAGATATTTTGTTTTCGTGGCCAAGCGAATCATACATTCAAAGCATCCAAATCCCTTTCTGTGGAAAATTGGGAAGGAAACATACGAGAGTTACAAAAACATATCCGTCCTTTGATGTCATCACTCGATCAACCTGTCCATGTCGCAAGTTGTGCAAATATCTGGATTAAGTAATGGTCCTCGTTTCGTGCTGCGTTTAGATATACTTGCAGAGGCGAGGCTCCATTAAATACTAATGGCGCCAACCGAATACCTGCGATGTGTATCAATCGATTTGTTCAATATGAACCAGAATTATTGAGGTAGGTTTTACGTCTTGCCTTTATTTTCTGATTAAATTCATGTTGGAGATGAAATCTTTTCTCGAGAGTTTCAGGGAAGTGAATTTTAACTTTTCTGCATCAATTTGTCGTTGTATGTTATCGGGATATTATATGCGAAGTTGAATACAAAACCTCCGTTTGCTAGTGATGTTGTCGTTTGTTGCGGGTTCAAATTCTGGGTCCAGTTGGGTTCTTCTAGCAATTTCTGGTTATCTTATGATAGAGATATTTGAATCGTCGCAGATCTTTGTTTTTGTCCTCTAAGATTGTTTCGGATAATGGGATATGTATAGAATAAAATCTGGATCGCAGTCCATCCCCTCCGATTTACTCACTGGCTAG

mRNA sequence

ATGAAAAATGAAAAAATCGAAGGCAAAGAATCGATGTATGAAAATCGATTAGAAATTCAAATGATATCTGTAAGAGGCGAGGCTCCATTAAATACTAATGGCGCCAACCGAATACCTGCGATGTGTATCAATCGATTTGTTCAATATGAACCAGAATTATTGAGAATAAAATCTGGATCGCAGTCCATCCCCTCCGATTTACTCACTGGCTAG

Coding sequence (CDS)

ATGAAAAATGAAAAAATCGAAGGCAAAGAATCGATGTATGAAAATCGATTAGAAATTCAAATGATATCTGTAAGAGGCGAGGCTCCATTAAATACTAATGGCGCCAACCGAATACCTGCGATGTGTATCAATCGATTTGTTCAATATGAACCAGAATTATTGAGAATAAAATCTGGATCGCAGTCCATCCCCTCCGATTTACTCACTGGCTAG

Protein sequence

MKNEKIEGKESMYENRLEIQMISVRGEAPLNTNGANRIPAMCINRFVQYEPELLRIKSGSQSIPSDLLTG
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh09G000560.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G000560.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G000560.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G000560.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh09G000560CmaCh09G000560gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh09G000560.1:exon:1551CmaCh09G000560.1:exon:1551exon
CmaCh09G000560.1:exon:1550CmaCh09G000560.1:exon:1550exon
CmaCh09G000560.1:exon:1549CmaCh09G000560.1:exon:1549exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh09G000560.1:cdsCmaCh09G000560.1:cdsCDS
CmaCh09G000560.1:cdsCmaCh09G000560.1:cds_2CDS
CmaCh09G000560.1:cdsCmaCh09G000560.1:cds_3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh09G000560.1CmaCh09G000560.1-proteinpolypeptide