CmaCh06G015820.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G015820.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Peroxiredoxin
Location	Cma_Chr06: 9891202 .. 9893033 (+)
Sequence length	840
RNA-Seq Expression	CmaCh06G015820.1
Synteny	CmaCh06G015820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAACAACATCGCACATCAGAACACCAAAACTTCAAATTTGAACCATCCTTCTGTAGGAAGAAGATGCCAGGCCTTACCATCGGCGATACAGTGCCCAACATTCAAGCTGATAGCACCCATGGAAAGATCAGTTTATATGACTACATCGACGGCAGCTGGGCCATCATCTTCTCTCACCCAGGTAGGTACCCATTTGGCCGTGTTGTTGTCTTGAATTTGGTAATAGATATTGATGAACGGTCTTGGTGGCAGGTGATTTCACTCCAGTTTGTACTACGGAGCTGGGGATGATCGCTGCTCAGGCAGAGGAGTTTGCTCAACGAGGTGTGAAGCTCATAGGATTGTCTTGTGATGATGTTCAATCTCATACCGATTGGATCAAGGATATCGAAGCCTACAATGTGAGTTCTTGTTCTCTCTTTCTTTCTGAACATTGCATGATTTTATTCACTTATTTGGTTTCGCTAGGGAGGGAAGTGTTGGGGGAACTTTTAAAATGGATCTTGTTGAGGATCGGTTAGGAGAGCCTCCTTAATTTAGAGGATGATCATGGGTAGGAATATATCAAGGTCTTTTGGTTTTATACTTAAAACTCCACAATAGTATATACTATTGTGGCTCTCGATATAGAATCAGAGCCATGCATTTCATGTAGCATGTCAATAGAATCATTCAGCCGAACAAAGAAAAGAAATTGCTAGCTTCACAAGTGCAGACAAAAGTGACTATGCCCCGAACGAAGGACAAAATTGCTAGGTTCGAAAGTGCAGACAAAAGTGAATCTATGCCTTGGATCGTTCGAGGAATCCAAGAGCTCCAGATAAAGAGTTGAGCCCTCGATTAAGGAGCCTCCATCCTCCCCCAGAAGTCGCCCTATGGTCTACTTTGTTCGATAGGAGAATTGTTGAGGATGGTTCGAGGAGTTGATCTTCGATTAAGGGGAGGTGGTTCGAGGGCTACGTAGAACTCAGGGGAGGCTCTATTATGGTGTACTCTCAGGGGAGGCTCTATTATGGTGTACTCTCAGGGGAGGCTCTATTATGGTGTACTCTCAGGGGAGGCTCTATTATGGTGTACTCTCAGGGGAGGCTCTATTATGGTGTACTCTCAGGGGAGGCTCTATTATGGTGTACTTTCTTCGATAGGAGGATTGTTGAGAATTGGTTGGGAGGGAGTTCCACATCGGTAAATGATCGTGAGTTCTCAAGTATATAGAGGTCCGTGATTCCTAACCAATCTTATTATCCTTTTGCAGAATGGAAAGAAGGTGACATATCCAATACTGGCGGATCCAAAGGGGGAGTTGATCAAGGAACTGAACATGGGGAAAGAAGGTGACATATCCAATACTGGCGGATCCAAAGGGGGAGTTGATCAAGGAACTGAACATGGTGGACCCGGACGAGAAGGACTCATCAGGCAGGGCAGTGCCATCGAGAGCATTGCACATCATCGGTCCAGACAAGAAGGTGAAGCTGAGCTTCCTGTACCCAGCAAGTACAGGGAGGAACATGGAGGAAGTGATGAGGGTTTTGGAGTCATTGCAGAAGGCTGCAAAGCACAAGGTTTGCACTCCAGTTAACTGGAAGCCAGGCGAGGCCTGCGTGATTCCGCCCAATGTAACTAATGATCAGGCCAAGCAAATGTTCCCTCAAGGCTTTGAAACTCTTGATCTTCCTTCCAAGAAGGGATACTTGCGTTTTGCTGCTGTCTGAAGGCCATGGCTGTGTGTGAATGTTTGATTAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGGATATGAAAATAGTAATAAATGGAA

mRNA sequence

GAAGAAACAACATCGCACATCAGAACACCAAAACTTCAAATTTGAACCATCCTTCTGTAGGAAGAAGATGCCAGGCCTTACCATCGGCGATACAGTGCCCAACATTCAAGCTGATAGCACCCATGGAAAGATCAGTTTATATGACTACATCGACGGCAGCTGGGCCATCATCTTCTCTCACCCAGGTGATTTCACTCCAGTTTGTACTACGGAGCTGGGGATGATCGCTGCTCAGGCAGAGGAGTTTGCTCAACGAGGTGTGAAGCTCATAGGATTGTCTTGTGATGATGTTCAATCTCATACCGATTGGATCAAGGATATCGAAGCCTACAATAATGGAAAGAAGGTGACATATCCAATACTGGCGGATCCAAAGGGGGAGTTGATCAAGGAACTGAACATGGTGGACCCGGACGAGAAGGACTCATCAGGCAGGGCAGTGCCATCGAGAGCATTGCACATCATCGGTCCAGACAAGAAGGTGAAGCTGAGCTTCCTGTACCCAGCAAGTACAGGGAGGAACATGGAGGAAGTGATGAGGGTTTTGGAGTCATTGCAGAAGGCTGCAAAGCACAAGGTTTGCACTCCAGTTAACTGGAAGCCAGGCGAGGCCTGCGTGATTCCGCCCAATGTAACTAATGATCAGGCCAAGCAAATGTTCCCTCAAGGCTTTGAAACTCTTGATCTTCCTTCCAAGAAGGGATACTTGCGTTTTGCTGCTGTCTGAAGGCCATGGCTGTGTGTGAATGTTTGATTAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGGATATGAAAATAGTAATAAATGGAA

Coding sequence (CDS)

ATGCCAGGCCTTACCATCGGCGATACAGTGCCCAACATTCAAGCTGATAGCACCCATGGAAAGATCAGTTTATATGACTACATCGACGGCAGCTGGGCCATCATCTTCTCTCACCCAGGTGATTTCACTCCAGTTTGTACTACGGAGCTGGGGATGATCGCTGCTCAGGCAGAGGAGTTTGCTCAACGAGGTGTGAAGCTCATAGGATTGTCTTGTGATGATGTTCAATCTCATACCGATTGGATCAAGGATATCGAAGCCTACAATAATGGAAAGAAGGTGACATATCCAATACTGGCGGATCCAAAGGGGGAGTTGATCAAGGAACTGAACATGGTGGACCCGGACGAGAAGGACTCATCAGGCAGGGCAGTGCCATCGAGAGCATTGCACATCATCGGTCCAGACAAGAAGGTGAAGCTGAGCTTCCTGTACCCAGCAAGTACAGGGAGGAACATGGAGGAAGTGATGAGGGTTTTGGAGTCATTGCAGAAGGCTGCAAAGCACAAGGTTTGCACTCCAGTTAACTGGAAGCCAGGCGAGGCCTGCGTGATTCCGCCCAATGTAACTAATGATCAGGCCAAGCAAATGTTCCCTCAAGGCTTTGAAACTCTTGATCTTCCTTCCAAGAAGGGATACTTGCGTTTTGCTGCTGTCTGA

Protein sequence

MPGLTIGDTVPNIQADSTHGKISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEFAQRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDSSGRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKHKVCTPVNWKPGEACVIPPNVTNDQAKQMFPQGFETLDLPSKKGYLRFAAV

Homology

[Close]

BLAST of CmaCh06G015820.1 vs. ExPASy Swiss-Prot
Match: P0C5C9 (1-Cys peroxiredoxin A OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0638300 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.5e-94
Identity = 156/219 (71.23%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 1   MPGLTIGDTVPNIQADSTHGKISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEF 60
           MPGLTIGDTVPN++ DSTHGKI ++D++  ++ I+FSHPGDFTPVCTTEL  +A  A+EF
Sbjct: 1   MPGLTIGDTVPNLELDSTHGKIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEF 60

Query: 61  AQRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDS 120
            +RGVKL+G+SCDDVQSH DWIKDIEAY  G +VTYPI+ADP  E IK+LNMVDPDEKDS
Sbjct: 61  DKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDS 120

Query: 121 SGRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKHKVCTPVNWKPG 180
           +G  +PSRALHI+GPDKKVKLSFLYPA  GRNM+EV+R +++LQ AAKH V TPVNWKPG
Sbjct: 121 NGGHLPSRALHIVGPDKKVKLSFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPG 180

Query: 181 EACVIPPNVTNDQAKQMFPQGFETLDLPSKKGYLRFAAV 220
           E  VIPP V++D+AK+ FPQGF+T DLPS KGYLRF  V
Sbjct: 181 ERVVIPPGVSDDEAKEKFPQGFDTADLPSGKGYLRFTKV 219

[Close]

BLAST of CmaCh06G015820.1 vs. ExPASy Swiss-Prot
Match: P0C5C8 (1-Cys peroxiredoxin A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_27030 PE=2 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.2e-93
Identity = 155/219 (70.78%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 1   MPGLTIGDTVPNIQADSTHGKISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEF 60
           MPGLTIGDTVPN++ DSTHGKI ++D++  ++ I+FSHPGDFTPVCTTEL  +A  A+EF
Sbjct: 1   MPGLTIGDTVPNLELDSTHGKIRIHDFVGDTYIILFSHPGDFTPVCTTELAAMAGYAKEF 60

Query: 61  AQRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDS 120
            +RGVKL+G+SCDDVQSH DWIKDIEAY  G +VTYPI+ADP  E IK+LNMVDPDEKDS
Sbjct: 61  DKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDS 120

Query: 121 SGRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKHKVCTPVNWKPG 180
           +G  +PSRALHI+GPDKKVKLSFLYP+  GRNM+EV+R +++LQ AAKH V TPVNWKPG
Sbjct: 121 NGGHLPSRALHIVGPDKKVKLSFLYPSCVGRNMDEVVRAVDALQTAAKHAVATPVNWKPG 180

Query: 181 EACVIPPNVTNDQAKQMFPQGFETLDLPSKKGYLRFAAV 220
           E  VIPP V++D+AK+ FPQGF+T DLPS KGYLRF  V
Sbjct: 181 ERVVIPPGVSDDEAKEKFPQGFDTADLPSGKGYLRFTKV 219

[Close]

BLAST of CmaCh06G015820.1 vs. ExPASy Swiss-Prot
Match: Q6E2Z6 (1-Cys peroxiredoxin OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-92
Identity = 154/219 (70.32%), Postives = 187/219 (85.39%), Query Frame = 0


Query: 1   MPGLTIGDTVPNIQADSTHGKISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEF 60
           MPGLTIGDT+P+++ D+T GKI L+ +   SW I+FSHPGDFTPVCTTELG +A  A EF
Sbjct: 1   MPGLTIGDTIPDLEVDTTQGKIKLHHFCSDSWTILFSHPGDFTPVCTTELGKMAQYASEF 60

Query: 61  AQRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDS 120
            +RGV L+G+SCDD++SH +WIKDIEA+  G KV YPI++DPK E+IK+LNMVDPDEKDS
Sbjct: 61  NKRGVMLLGMSCDDLESHKEWIKDIEAHTPGAKVNYPIISDPKREIIKQLNMVDPDEKDS 120

Query: 121 SGRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKHKVCTPVNWKPG 180
           +G  +PSRALHI+GPDKK+KLSFLYPA TGRNM+EV+RV+ESLQKA+K+K+ TP NWKPG
Sbjct: 121 NGN-LPSRALHIVGPDKKIKLSFLYPAQTGRNMDEVLRVVESLQKASKYKIATPANWKPG 180

Query: 181 EACVIPPNVTNDQAKQMFPQGFETLDLPSKKGYLRFAAV 220
           E  VI P+VTNDQAK+MFPQGF+T DLPSKK YLRF  V
Sbjct: 181 EPVVISPDVTNDQAKEMFPQGFKTADLPSKKEYLRFTNV 218

[Close]

BLAST of CmaCh06G015820.1 vs. ExPASy Swiss-Prot
Match: Q6W8Q2 (1-Cys peroxiredoxin PER1 OS=Triticum aestivum OX=4565 GN=PER1 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.0e-91
Identity = 154/219 (70.32%), Postives = 182/219 (83.11%), Query Frame = 0


Query: 1   MPGLTIGDTVPNIQADSTHGKISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEF 60
           MPGLTIGDTVPN++ DSTHGKI ++DY+   + I+FSHPGDFTPVCTTEL  +A  A+EF
Sbjct: 1   MPGLTIGDTVPNLELDSTHGKIRIHDYVGNGYVILFSHPGDFTPVCTTELAAMANYAKEF 60

Query: 61  AQRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDS 120
            +RGVKL+G+SCDDVQSH +W KDIEAY  G KVTYPI+ADP    IK+LNMVDPDEKD+
Sbjct: 61  EKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDA 120

Query: 121 SGRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKHKVCTPVNWKPG 180
            G+ +PSR LHI+GPDKKVKLSFLYP+ TGRNM+EV+R ++SL  AAKHKV TP NW PG
Sbjct: 121 EGQ-LPSRTLHIVGPDKKVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWNPG 180

Query: 181 EACVIPPNVTNDQAKQMFPQGFETLDLPSKKGYLRFAAV 220
           E  VI P V++D+AK+MFPQGFET DLPSKKGYLRF  V
Sbjct: 181 ECVVIAPGVSDDEAKKMFPQGFETADLPSKKGYLRFTKV 218

[Close]

BLAST of CmaCh06G015820.1 vs. ExPASy Swiss-Prot
Match: P52572 (1-Cys peroxiredoxin PER1 OS=Hordeum vulgare OX=4513 GN=PER1 PE=2 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.0e-90
Identity = 153/219 (69.86%), Postives = 182/219 (83.11%), Query Frame = 0


Query: 1   MPGLTIGDTVPNIQADSTHGKISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEF 60
           MPGLTIGDTVPN++ DSTHGKI ++DY+   + I+FSHPGDFTPVCTTEL  +A  A+EF
Sbjct: 1   MPGLTIGDTVPNLELDSTHGKIRIHDYVGNGYVILFSHPGDFTPVCTTELAAMANYAKEF 60

Query: 61  AQRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDS 120
            +RGVKL+G+SCDDVQSH +W KDIEAY  G KVTYPI+ADP    IK+LNMVDPDEKD+
Sbjct: 61  EKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDA 120

Query: 121 SGRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKHKVCTPVNWKPG 180
            G+ +PSR LHI+GPDK VKLSFLYP+ TGRNM+EV+R ++SL  AAKHKV TP NWKPG
Sbjct: 121 QGQ-LPSRTLHIVGPDKVVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWKPG 180

Query: 181 EACVIPPNVTNDQAKQMFPQGFETLDLPSKKGYLRFAAV 220
           E  VI P V++++AK+MFPQGFET DLPSKKGYLRF  V
Sbjct: 181 ECVVIAPGVSDEEAKKMFPQGFETADLPSKKGYLRFTKV 218

[Close]

BLAST of CmaCh06G015820.1 vs. TAIR 10
Match: AT1G48130.1 (1-cysteine peroxiredoxin 1 )

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-85
Identity = 143/221 (64.71%), Postives = 177/221 (80.09%), Query Frame = 0


Query: 1   MPGLTIGDTVPNIQADSTHGKISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEF 60
           MPG+T+GDTVPN++ ++TH K  L+DY   SW ++FSHPGDFTPVCTTELG +A  A EF
Sbjct: 1   MPGITLGDTVPNLEVETTHDKFKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEF 60

Query: 61  AQRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDS 120
            +RGVKL+GLSCDDVQSH DWIKDIEA+N+G KV YPI+ADP  E+I +LNM+DP E   
Sbjct: 61  DKRGVKLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENG- 120

Query: 121 SGRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKH--KVCTPVNWK 180
                PSRALHI+GPD K+KLSFLYP++TGRNM+EV+R L+SL  A+KH  K+ TPVNWK
Sbjct: 121 -----PSRALHIVGPDSKIKLSFLYPSTTGRNMDEVLRALDSLLMASKHNNKIATPVNWK 180

Query: 181 PGEACVIPPNVTNDQAKQMFPQGFETLDLPSKKGYLRFAAV 220
           P +  VI P V++++AK+MFPQGF+T DLPSKKGYLR   V
Sbjct: 181 PDQPVVISPAVSDEEAKKMFPQGFKTADLPSKKGYLRHTEV 215

[Close]

BLAST of CmaCh06G015820.1 vs. TAIR 10
Match: AT5G06290.1 (2-cysteine peroxiredoxin B )

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-21
Identity = 55/187 (29.41%), Postives = 98/187 (52.41%), Query Frame = 0


Query: 6   IGDTVPNIQADSTHG----KISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEFA 65
           +G+  P+ +A++       K+ L +YI   + I+F +P DFT VC TE+   + + EEF 
Sbjct: 82  VGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFE 141

Query: 66  QRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDSS 125
           +   +++G+S D V SH  W++          + YP+++D    + K   ++ PD+    
Sbjct: 142 KLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ---- 201

Query: 126 GRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKH--KVCTPVNWKP 185
              +  R L II  +  ++ S +     GR+++E MR L++LQ   ++  +VC P  WKP
Sbjct: 202 --GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVC-PAGWKP 261

Query: 186 GEACVIP 187
           GE  + P
Sbjct: 262 GEKSMKP 261

[Close]

BLAST of CmaCh06G015820.1 vs. TAIR 10
Match: AT3G11630.1 (Thioredoxin superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 9.6e-20
Identity = 54/187 (28.88%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 6   IGDTVPNIQADSTHG----KISLYDYIDGSWAIIFSHPGDFTPVCTTELGMIAAQAEEFA 65
           +G+  P+ +A++       K+ L DYI   + I+F +P DFT VC TE+   + +  EF 
Sbjct: 75  VGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFE 134

Query: 66  QRGVKLIGLSCDDVQSHTDWIKDIEAYNNGKKVTYPILADPKGELIKELNMVDPDEKDSS 125
           +   +++G+S D V SH  W++          + YP+++D    + K   ++  D+    
Sbjct: 135 KLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQ---- 194

Query: 126 GRAVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVMRVLESLQKAAKH--KVCTPVNWKP 185
              +  R L II  +  ++ S +     GR+++E MR L++LQ   ++  +VC P  WKP
Sbjct: 195 --GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVC-PAGWKP 254

Query: 186 GEACVIP 187
           GE  + P
Sbjct: 255 GEKSMKP 254

The following BLAST results are available for this feature:

BLAST of CmaCh06G015820.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C5C9	7.5e-94	71.23	1-Cys peroxiredoxin A OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0638300 P...	[more]
P0C5C8	2.2e-93	70.78	1-Cys peroxiredoxin A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_27030 PE=2 S...	[more]
Q6E2Z6	1.8e-92	70.32	1-Cys peroxiredoxin OS=Medicago truncatula OX=3880 PE=2 SV=1	[more]
Q6W8Q2	2.0e-91	70.32	1-Cys peroxiredoxin PER1 OS=Triticum aestivum OX=4565 GN=PER1 PE=2 SV=1	[more]
P52572	1.0e-90	69.86	1-Cys peroxiredoxin PER1 OS=Hordeum vulgare OX=4513 GN=PER1 PE=2 SV=1	[more]

BLAST of CmaCh06G015820.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48130.1	1.3e-85	64.71	1-cysteine peroxiredoxin 1	[more]
AT5G06290.1	8.6e-21	29.41	2-cysteine peroxiredoxin B	[more]
AT3G11630.1	9.6e-20	28.88	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 3..151 e-value: 2.3E-51 score: 175.2
None	No IPR available	GENE3D	3.30.1020.10	Antioxidant, Horf6; Chain A, domain2	coord: 152..218 e-value: 7.2E-28 score: 98.3
None	No IPR available	PANTHER	PTHR43503:SF4	MCG48959-RELATED	coord: 1..217
None	No IPR available	PANTHER	PTHR43503	MCG48959-RELATED	coord: 1..217
IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	PFAM	PF00578	AhpC-TSA	coord: 6..140 e-value: 5.3E-31 score: 107.1
IPR019479	Peroxiredoxin, C-terminal	PFAM	PF10417	1-cysPrx_C	coord: 162..201 e-value: 1.8E-11 score: 43.7
IPR024706	Peroxiredoxin, AhpC-type	PIRSF	PIRSF000239	AHPC	coord: 1..218 e-value: 3.9E-72 score: 239.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 4..165 score: 17.187725
IPR045020	1-Cys peroxiredoxin	CDD	cd03016	PRX_1cys	coord: 6..217 e-value: 3.27791E-121 score: 340.287
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..216

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G015820	CmaCh06G015820	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G015820.1:exon:1232	CmaCh06G015820.1:exon:1232	exon
CmaCh06G015820.1:exon:1233	CmaCh06G015820.1:exon:1233	exon
CmaCh06G015820.1:exon:1234	CmaCh06G015820.1:exon:1234	exon
CmaCh06G015820.1:exon:1235	CmaCh06G015820.1:exon:1235	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G015820.1:five_prime_utr	CmaCh06G015820.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G015820.1:cds	CmaCh06G015820.1:cds	CDS
CmaCh06G015820.1:cds	CmaCh06G015820.1:cds_2	CDS
CmaCh06G015820.1:cds	CmaCh06G015820.1:cds_3	CDS
CmaCh06G015820.1:cds	CmaCh06G015820.1:cds_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G015820.1:three_prime_utr	CmaCh06G015820.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G015820.1	CmaCh06G015820.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016209	antioxidant activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0051920	peroxiredoxin activity
molecular_function	GO:0008379	thioredoxin peroxidase activity