CmaCh06G007420.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G007420.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr06: 3746089 .. 3747764 (-)
Sequence length325
RNA-Seq ExpressionCmaCh06G007420.1
SyntenyCmaCh06G007420.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGGGCGTGCTGGAAAATTAAATATTCTCTTAAACGCCTCTTAGTTATACATCAACCTCTTGGAAACAGGTACCTAAACACTAAAAATGAGGAAGTTGGTGGATGGGCTACCTTTTCTGGTGTATAATTTTTGCCTTTTAACAATCTCTAGCATTCATCCAGAGGATGATCCTAAAGGGAGCCCATTTTGGGACAAGTTCGAGGCTGAATTAGTTGAATGAAGTGTTCATATCTAAAGGTGGAAGGCTTAGATTTGCTCAATCTACTCTATCAAGTAAGCCTAAAGAAACAAGGACAGCTGCCCTTTACCTAAAATTCCTAAATATGATGAGTAGTTTGGTCGTTTCCTTAGGTTTAAGCTAGAAAATAGGCTGTTTATCAGAATTTAAAAGGATTACTGGCTGTGTGTTAGAATTTGTGTTATCTCCAACCAAAAAGACTACTTGCGAGCGACTGCTGGAACTCTGAACATGATAACTAGGATTTGGGACAGATTACAATAAAGAATCTCGTTGGGCTCTCTCCTTTTGGTTGGAGTTTACATTTTGTAACGACTCAAGCCCACTGCCAGAAAGAAGCTAGTAGGTATTGTCCTCTTTAGGCTTTCCCCTCAAGATTTTTATAATGTGTGCTAGGAAGAGGTTTCCAGACCGTTATAAAGAATGTTTTGTTCTCTTCTCCAACCAATGTGGGAACTCACAATCCACCTCCCTTCTCCAATTGATGTGGGACCCCCCAATCCACCCTCCTTCAGGGCCCAGCGTCCTTGCTGGCACACTGCCTCGTATCCACCCCCTTTCGGGGCTTAGCCTCCTCGCTGACACATCATTTGGTGTCTGGCTCTAATATCATTTGTAACAGCCTAAGCCCCCCGCTGCTTTCCATTTCGGGTTTCCTTTCAAGATTTTTAAAATGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAAAATATTTTGACTCTCCTCCCCAACCGACTTGGGATATCATACACATTCTAAGGATGAAGCAACTACAGATTACTTTTTCACTATTTTTCTTCTGCGGTTAAGGAGTACTCCTTCCAGAAGCTCTTCCAGGTTGCTGGCTGAACGATATGGAAATTTGTGGAAAACTGTGACGGTTGTTCTTATGGATTGATAAAAATCAGACAATTACAAGCTGTTGGGAACTTAAAAATGGTCATAACTCATAACTCTGTAGTCTGTTTCCATACAATGGCATGAGCTGGTGAAGAGAAACCTGTTGTGCTTGACTTCCAACTAGTTGATGAAACTCCTACTGAAATATCTCTGTGCTGCTTCTGTATTTATTCATAGTCGGTAGAACTGAAACTAGAACTAAACCCTGCCCCCGACCGTGTTTTGATGTCGTAACTTCACTCAATCTTACTGTGTGTGTTTGTATTTATTTGCGTAGGTGTTGCCACCGAACGACCAACATATTTAAAAGAGAACGGTTTCGGTCGCTAGCCGTACTAGAAAGGCCAAGCCATGACAGACAAGAAGCTCTTCGACTCAATTCCAACATAATTACTCTCATGCTATCACATCATTTACTCATTTAGGTATCGGTAGCAATCAGCGATACGAGAATGATGCATTGTAGTTGTAGCTGATATTTTGTTACAATGATATTTACAATTAATTTCATAGCATCATTTTCTTTTA

mRNA sequence

ATGATAAGGGCGTGCTGGAAAATTAAATATTCTCTTAAACGCCTCTTAGTTATACATCAACCTCTTGGAAACAGGTGTTGCCACCGAACGACCAACATATTTAAAAGAGAACGGTTTCGGTCGCTAGCCGTACTAGAAAGGCCAAGCCATGACAGACAAGAAGCTCTTCGACTCAATTCCAACATAATTACTCTCATGCTATCACATCATTTACTCATTTAGGTATCGGTAGCAATCAGCGATACGAGAATGATGCATTGTAGTTGTAGCTGATATTTTGTTACAATGATATTTACAATTAATTTCATAGCATCATTTTCTTTTA

Coding sequence (CDS)

ATGATAAGGGCGTGCTGGAAAATTAAATATTCTCTTAAACGCCTCTTAGTTATACATCAACCTCTTGGAAACAGGTGTTGCCACCGAACGACCAACATATTTAAAAGAGAACGGTTTCGGTCGCTAGCCGTACTAGAAAGGCCAAGCCATGACAGACAAGAAGCTCTTCGACTCAATTCCAACATAATTACTCTCATGCTATCACATCATTTACTCATTTAG

Protein sequence

MIRACWKIKYSLKRLLVIHQPLGNRCCHRTTNIFKRERFRSLAVLERPSHDRQEALRLNSNIITLMLSHHLLI
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh06G007420.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh06G007420.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh06G007420.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh06G007420.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh06G007420CmaCh06G007420gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh06G007420.1:exon:675CmaCh06G007420.1:exon:675exon
CmaCh06G007420.1:exon:674CmaCh06G007420.1:exon:674exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh06G007420.1:three_prime_utrCmaCh06G007420.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh06G007420.1:cdsCmaCh06G007420.1:cds_2CDS
CmaCh06G007420.1:cdsCmaCh06G007420.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh06G007420.1CmaCh06G007420.1-proteinpolypeptide