CmaCh06G004830.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G004830.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Auxin-responsive protein
Location	Cma_Chr06: 2277075 .. 2277431 (+)
Sequence length	357
RNA-Seq Expression	CmaCh06G004830.1
Synteny	CmaCh06G004830.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGCATCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGGAGATTTGTGGTACCGACCAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTTGATCAAAGAAGTGGTCTCGTGGTTCCTTGCAATGCTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTTGTTTGA

mRNA sequence

ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGCATCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGGAGATTTGTGGTACCGACCAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTTGATCAAAGAAGTGGTCTCGTGGTTCCTTGCAATGCTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTTGTTTGA

Coding sequence (CDS)

ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGCATCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGGAGATTTGTGGTACCGACCAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTTGATCAAAGAAGTGGTCTCGTGGTTCCTTGCAATGCTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTTGTTTGA

Protein sequence

MLKKRIPSLKKLVKTNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEHVHEFV

Homology

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.6e-11
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 39  PRGCVVLYV---GEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQ 98
           P+GC+ + V   GEE +RF+VP  +  HPLF  +L +A +E+GFDQ+  + +PC+   F+
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFR 84

Query: 99  EILNTIEANRGSFHFGEHVH 116
            +   I+  R  ++   H H
Sbjct: 85  YVQALIDGERSVYNGNNHHH 104

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 39  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEIL 98
           P+G   +YVGE   R++VP  FL HP F+ +L +A  EFGFD   GL +PC+   FQ + 
Sbjct: 44  PKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLT 103

Query: 99  NTI 102
           + I
Sbjct: 104 SMI 106

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 25  LASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQ-RS 84
           L+++  ASS     P+G + +YVGE  +RFV+P   L  PLF+ +L +A  EFG+D    
Sbjct: 12  LSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMG 71

Query: 85  GLVVPCNAFAFQEILNTIEA 104
           GL +PC+   FQ I + + A
Sbjct: 72  GLTIPCSEDLFQHITSCLSA 91

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10
Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 36  NTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQ 95
           NT P G V +YVGEE  RFVV  + + HP+F  +L+++  E+G+ Q+  L +PC+   F+
Sbjct: 52  NTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFE 111

Query: 96  EILNTI 102
            ++ T+
Sbjct: 112 RVVETL 117

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10
Identity = 31/95 (32.63%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 12  LVKTNKHRPGK---CILASKMAASSGRNTT--PRGCVVLYVGEEYRRFVVPTKFLCHPLF 71
           L++++  RP +     L S +   S + T+  P G V +YVG+E  RFVV  + L HP+F
Sbjct: 19  LLRSDSQRPSRRSESFLRSSVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVF 78

Query: 72  KMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTI 102
             +L+++  E+G++Q+  L +PC+   F+ I+ ++
Sbjct: 79  IGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESL 113

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy TrEMBL
Match: A0A5A7TKN6 (Auxin-responsive protein SAUR15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002080 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41
Identity = 87/119 (73.11%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVK-TNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTK 60
           MLK R+PSLKKL K + + RP   +LAS+M A  GR  TPRGCV LYVGEE RRFVVPT+
Sbjct: 1   MLKNRVPSLKKLAKASGERRPDDSLLASEMEAGGGRCPTPRGCVALYVGEECRRFVVPTR 60

Query: 61  FLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEHVHEFV 119
           FLCHPLF+MVLDK Y EFGF+Q+SGLVV C+ FAFQEILNTIEAN GSFHFGE VHEF+
Sbjct: 61  FLCHPLFRMVLDKTYKEFGFNQKSGLVVSCSVFAFQEILNTIEANHGSFHFGELVHEFL 119

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy TrEMBL
Match: A0A0A0LAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777530 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40
Identity = 87/120 (72.50%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTN--KHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPT 60
           MLK R+PSLKK+ K N  + R    +LAS+M A  GR  TPRGCV LYVGEE RRFVVPT
Sbjct: 1   MLKNRVPSLKKVAKGNNGERRHEDSLLASEMEAGGGRCPTPRGCVALYVGEECRRFVVPT 60

Query: 61  KFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEHVHEFV 119
           +FLCHPLFKMVLDK Y EFGF+Q+SGLVV C+ FAFQEILNTIEAN GSFHFGE VHEF+
Sbjct: 61  RFLCHPLFKMVLDKTYKEFGFNQKSGLVVSCSVFAFQEILNTIEANHGSFHFGELVHEFL 120

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy TrEMBL
Match: A0A2K3P6J9 (SAUR family protein OS=Trifolium pratense OX=57577 GN=L195_g007511 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.8e-27
Identity = 67/125 (53.60%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKHRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRR 60
           ML K++ SLKKL K  K   G       +C+L       S  NTTP G   LYVGEE++R
Sbjct: 1   MLGKKMVSLKKLAKKVKASGGADPNTNHECLLKGYQEEFS-TNTTPTGYFALYVGEEHQR 60

Query: 61  FVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEH 119
            VVPT +L HPLFKM+L+K+YNEFGF+QR+GLVVPC+   FQE++N IE N G FH G+ 
Sbjct: 61  NVVPTSYLSHPLFKMLLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKI 120

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy TrEMBL
Match: A0A6P4AQB8 (auxin-induced protein 15A OS=Ziziphus jujuba OX=326968 GN=LOC107432098 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26
Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKHRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYR 60
           ML K++ S KKL K  K   G        +C+L      S    TTP G + +YVGEE +
Sbjct: 1   MLGKKMVSFKKLAKKVKDLGGNDRQPSYNECLLREFEQDSPSSATTPTGFLAVYVGEERQ 60

Query: 61  RFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGE 119
           RFVVPT FL HPLFKM+L+KAYNEFGF+QR+GLVVPC+   FQE++N +E + G F FG+
Sbjct: 61  RFVVPTSFLAHPLFKMLLEKAYNEFGFEQRNGLVVPCSVSTFQEVVNAVECSNGKFDFGK 120

[Close]

BLAST of CmaCh06G004830.1 vs. ExPASy TrEMBL
Match: A0A2Z6P028 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_25250 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.9e-26
Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKHRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRR 60
           ML K++ SLKKL K  K   G       +C+L       S  NTTP G   LYVGEE++R
Sbjct: 1   MLGKKMVSLKKLAKKVKASGGADPNTNHECLLKGYEEEFS-TNTTPTGYFALYVGEEHQR 60

Query: 61  FVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEH 119
            VVPT +L HPLFK++L+K+YNEFGF+QR+GLVVPC+   FQE++N IE N G FH G+ 
Sbjct: 61  NVVPTSYLSHPLFKILLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKI 120

[Close]

BLAST of CmaCh06G004830.1 vs. NCBI nr
Match: KAG6596577.1 (Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 7.4e-61
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKF 60
           MLKKRIPSLKKLVKTNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKF
Sbjct: 1   MLKKRIPSLKKLVKTNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKF 60

Query: 61  LCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEHVHEFV 119
           LCHPLFKMVLDKAYNEFGFDQRSGLV+PCN FAFQEILNTIEANRGSFHFGEHVHEFV
Sbjct: 61  LCHPLFKMVLDKAYNEFGFDQRSGLVIPCNVFAFQEILNTIEANRGSFHFGEHVHEFV 118

[Close]

BLAST of CmaCh06G004830.1 vs. NCBI nr
Match: KAA0043872.1 (auxin-responsive protein SAUR15-like [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-41
Identity = 87/119 (73.11%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVK-TNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTK 60
           MLK R+PSLKKL K + + RP   +LAS+M A  GR  TPRGCV LYVGEE RRFVVPT+
Sbjct: 1   MLKNRVPSLKKLAKASGERRPDDSLLASEMEAGGGRCPTPRGCVALYVGEECRRFVVPTR 60

Query: 61  FLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEHVHEFV 119
           FLCHPLF+MVLDK Y EFGF+Q+SGLVV C+ FAFQEILNTIEAN GSFHFGE VHEF+
Sbjct: 61  FLCHPLFRMVLDKTYKEFGFNQKSGLVVSCSVFAFQEILNTIEANHGSFHFGELVHEFL 119

[Close]

BLAST of CmaCh06G004830.1 vs. NCBI nr
Match: PNY10917.1 (SAUR family protein [Trifolium pratense])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 67/125 (53.60%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKHRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRR 60
           ML K++ SLKKL K  K   G       +C+L       S  NTTP G   LYVGEE++R
Sbjct: 1   MLGKKMVSLKKLAKKVKASGGADPNTNHECLLKGYQEEFS-TNTTPTGYFALYVGEEHQR 60

Query: 61  FVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEH 119
            VVPT +L HPLFKM+L+K+YNEFGF+QR+GLVVPC+   FQE++N IE N G FH G+ 
Sbjct: 61  NVVPTSYLSHPLFKMLLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKI 120

[Close]

BLAST of CmaCh06G004830.1 vs. NCBI nr
Match: XP_015898653.1 (auxin-induced protein 15A [Ziziphus jujuba])

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKHRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYR 60
           ML K++ S KKL K  K   G        +C+L      S    TTP G + +YVGEE +
Sbjct: 1   MLGKKMVSFKKLAKKVKDLGGNDRQPSYNECLLREFEQDSPSSATTPTGFLAVYVGEERQ 60

Query: 61  RFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGE 119
           RFVVPT FL HPLFKM+L+KAYNEFGF+QR+GLVVPC+   FQE++N +E + G F FG+
Sbjct: 61  RFVVPTSFLAHPLFKMLLEKAYNEFGFEQRNGLVVPCSVSTFQEVVNAVECSNGKFDFGK 120

[Close]

BLAST of CmaCh06G004830.1 vs. NCBI nr
Match: GAU49066.1 (hypothetical protein TSUD_25250 [Trifolium subterraneum])

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25
Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKHRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRR 60
           ML K++ SLKKL K  K   G       +C+L       S  NTTP G   LYVGEE++R
Sbjct: 1   MLGKKMVSLKKLAKKVKASGGADPNTNHECLLKGYEEEFS-TNTTPTGYFALYVGEEHQR 60

Query: 61  FVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEH 119
            VVPT +L HPLFK++L+K+YNEFGF+QR+GLVVPC+   FQE++N IE N G FH G+ 
Sbjct: 61  NVVPTSYLSHPLFKILLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKI 120

[Close]

BLAST of CmaCh06G004830.1 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-19
Identity = 55/135 (40.74%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 1   MLKKRIPSLKKLVKTNKH-----RPG-----------KCILASKMAASSGRNTTPRGCVV 60
           ML KRI S K L K  K      R G             ++     A+   + TP G   
Sbjct: 1   MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMNEADEAAMMASKTPTGTFA 60

Query: 61  LYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEF-GFDQRSGLVVPCNAFAFQEILNTIEA 119
           +YVGEE  + VVPT +L HPLF+M+LDK+++EF  F+Q+  LVVPC+   FQ+++N +E+
Sbjct: 61  VYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDVVNAVES 120

[Close]

BLAST of CmaCh06G004830.1 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 39  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEIL 98
           P+G + +YVG E RRF++PT +L H LFK++L+KA  EFGFDQ   L +PC    F+ +L
Sbjct: 80  PKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKYLL 139

Query: 99  NTIEANRGSFH 110
             +E N    H
Sbjct: 140 KCMENNLKDLH 150

[Close]

BLAST of CmaCh06G004830.1 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 39  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEIL 98
           P+G + +YVG E RRF++PT +L H LFK++L+KA  EFGFDQ   L +PC    F+ +L
Sbjct: 80  PKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKYLL 139

Query: 99  NTIEANRGSFH 110
             +E N    H
Sbjct: 140 KCMENNLKDLH 150

[Close]

BLAST of CmaCh06G004830.1 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 76.3 bits (186), Expect = 1.9e-14
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 39  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEIL 98
           P+G + +YVG E RRF++PT FL H LFK++L+KA  E+GFD    L +PC    F+ +L
Sbjct: 80  PKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYLL 139

Query: 99  NTIE 103
             IE
Sbjct: 140 KCIE 143

[Close]

BLAST of CmaCh06G004830.1 vs. TAIR 10
Match: AT3G20220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-12
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 35  RNTTPRGCVVLYVG-EEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFA 94
           +N  PRG + +YVG EE +RFV+PTK+L +P F+ ++D+  +EFG+D   G+ +PC    
Sbjct: 44  QNGVPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADEFGYDHEGGIHIPCEESV 103

Query: 95  FQEIL 99
           F+EIL
Sbjct: 104 FEEIL 108

The following BLAST results are available for this feature:

BLAST of CmaCh06G004830.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ3	5.6e-11	36.25	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
O65695	1.6e-10	44.44	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P32295	3.6e-10	40.00	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9SA49	4.7e-10	39.39	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
Q9LTV3	8.0e-10	32.63	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]

BLAST of CmaCh06G004830.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKN6	1.4e-41	73.11	Auxin-responsive protein SAUR15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LAX7	1.2e-40	72.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777530 PE=3 SV=1	[more]
A0A2K3P6J9	9.8e-27	53.60	SAUR family protein OS=Trifolium pratense OX=57577 GN=L195_g007511 PE=3 SV=1	[more]
A0A6P4AQB8	1.7e-26	52.38	auxin-induced protein 15A OS=Ziziphus jujuba OX=326968 GN=LOC107432098 PE=3 SV=1	[more]
A0A2Z6P028	4.9e-26	52.80	Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_25250 PE=3 SV=...	[more]

BLAST of CmaCh06G004830.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596577.1	7.4e-61	98.31	Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAA0043872.1	2.9e-41	73.11	auxin-responsive protein SAUR15-like [Cucumis melo var. makuwa]	[more]
PNY10917.1	2.0e-26	53.60	SAUR family protein [Trifolium pratense]	[more]
XP_015898653.1	3.5e-26	52.38	auxin-induced protein 15A [Ziziphus jujuba]	[more]
GAU49066.1	1.0e-25	52.80	hypothetical protein TSUD_25250 [Trifolium subterraneum]	[more]

BLAST of CmaCh06G004830.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36210.1	7.4e-19	40.74	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	1.7e-15	46.48	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	1.7e-15	46.48	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.9e-14	48.44	SAUR-like auxin-responsive protein family	[more]
AT3G20220.1	1.0e-12	46.15	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 22..100 e-value: 1.4E-22 score: 79.7
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 1..118
None	No IPR available	PANTHER	PTHR31374:SF28	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 1..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G004830	CmaCh06G004830	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G004830.1:exon:2966	CmaCh06G004830.1:exon:2966	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G004830.1:cds	CmaCh06G004830.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G004830.1	CmaCh06G004830.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin