CmaCh06G004020.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G004020.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor MYB114-like
Location	Cma_Chr06: 1865644 .. 1866615 (+)
Sequence length	719
RNA-Seq Expression	CmaCh06G004020.1
Synteny	CmaCh06G004020.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTCATTCAGCCCTTCACACTGAGATACAGCGTAGAGGACCTTGGCTCGAACATGAAGATAGGCAGCTCACCATGTTTGTAAATCGCATGGGAGAGAGAAAATGGGACTCGATCGCAAAAGCTTCCGGTATGACTTGAACATAATACTATGATATTGTTGACTTTATAAAGTTTCATGTCAAGACTTGTTTATATGTTCATATTCAAACATTGCAGGACTTGAAAGAAGTGGGAAGAGCTGTAGATTCAGATGGCTCAACTATCTCCGCCCCAATCTTAAATGTGATCGCATAAGCATCGAGGAAGAAGAAATCATTCTGAAACTTCATAAGAAATGGGGTAACAAGTATGAACTAAAATAACATCTGGGTGCTGGAAATTTTGGAACTTTATTGATCTATCAGCATCATTATCCAAATATATGTTCTTATAGATGGTCGAGAATTGCACGATGGCTTCCAGGAAGAACTGATAACGAGATCAAGAACTACTGGAGAAGCCACTTGAGAAAAAAGTTCCCCATTCACCTAGAAGGTTCATGGAAAAATCTGCGTTGGTTCTTGATATCTATATCAACCACATTCAGTTGCTTTAATTAGTTTCTTTTACAGCCTGCAAAGTAAAACATGGGAAACAGGACAAGCTCTCATTGAGGCATGACCAAAATGAAAGGGACGTTCCCTCCTACAATCATTTCGGGTTGTCGAACCTCGAGATCACAAGTTCGCCATACGAAATTCGATTATCAAACTGGATATCAAATCAGTTGATGAACGAGAAGCAGGAAGTGAATCATCATGAAGTGTGCAACAGTTTAGAATTCTGTTTCTACTATCCAAATATGAATTATGCACACAGAGTTGATCAAATCGACCATTTTTGGGATTCATTCACTCCTCTTTGGGATATTGAATAGCAAATCAAACGTTGTCTCCTCCTAATATAATCAACCCGTAAATATTTAAA

mRNA sequence

ATGGCTACTCATTCAGCCCTTCACACTGAGATACAGCGTAGAGGACCTTGGCTCGAACATGAAGATAGGCAGCTCACCATGTTTGTAAATCGCATGGGAGAGAGAAAATGGGACTCGATCGCAAAAGCTTCCGGACTTGAAAGAAGTGGGAAGAGCTGTAGATTCAGATGGCTCAACTATCTCCGCCCCAATCTTAAATGTGATCGCATAAGCATCGAGGAAGAAGAAATCATTCTGAAACTTCATAAGAAATGGGGTAACAAATGGTCGAGAATTGCACGATGGCTTCCAGGAAGAACTGATAACGAGATCAAGAACTACTGGAGAAGCCACTTGAGAAAAAAGTTCCCCATTCACCTAGAAGCCTGCAAAGTAAAACATGGGAAACAGGACAAGCTCTCATTGAGGCATGACCAAAATGAAAGGGACGTTCCCTCCTACAATCATTTCGGGTTGTCGAACCTCGAGATCACAAGTTCGCCATACGAAATTCGATTATCAAACTGGATATCAAATCAGTTGATGAACGAGAAGCAGGAAGTGAATCATCATGAAGTGTGCAACAGTTTAGAATTCTGTTTCTACTATCCAAATATGAATTATGCACACAGAGTTGATCAAATCGACCATTTTTGGGATTCATTCACTCCTCTTTGGGATATTGAATAGCAAATCAAACGTTGTCTCCTCCTAATATAATCAACCCGTAAATATTTAAA

Coding sequence (CDS)

ATGGCTACTCATTCAGCCCTTCACACTGAGATACAGCGTAGAGGACCTTGGCTCGAACATGAAGATAGGCAGCTCACCATGTTTGTAAATCGCATGGGAGAGAGAAAATGGGACTCGATCGCAAAAGCTTCCGGACTTGAAAGAAGTGGGAAGAGCTGTAGATTCAGATGGCTCAACTATCTCCGCCCCAATCTTAAATGTGATCGCATAAGCATCGAGGAAGAAGAAATCATTCTGAAACTTCATAAGAAATGGGGTAACAAATGGTCGAGAATTGCACGATGGCTTCCAGGAAGAACTGATAACGAGATCAAGAACTACTGGAGAAGCCACTTGAGAAAAAAGTTCCCCATTCACCTAGAAGCCTGCAAAGTAAAACATGGGAAACAGGACAAGCTCTCATTGAGGCATGACCAAAATGAAAGGGACGTTCCCTCCTACAATCATTTCGGGTTGTCGAACCTCGAGATCACAAGTTCGCCATACGAAATTCGATTATCAAACTGGATATCAAATCAGTTGATGAACGAGAAGCAGGAAGTGAATCATCATGAAGTGTGCAACAGTTTAGAATTCTGTTTCTACTATCCAAATATGAATTATGCACACAGAGTTGATCAAATCGACCATTTTTGGGATTCATTCACTCCTCTTTGGGATATTGAATAG

Protein sequence

MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHLEACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQEVNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE

Homology

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy Swiss-Prot
Match: Q9SCP1 (Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.3e-39
Identity = 89/199 (44.72%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 10  EIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDR 69
           E  RRGPWLE ED +L   ++ +GER+WDS+A  SGL+RSGKSCR RW+NYL P LK   
Sbjct: 7   ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKRGP 66

Query: 70  ISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHLEACKVKHGK 129
           +S EEE II +LH  WGNKWS+IAR LPGRTDNEIKNYWR+H RKK          +   
Sbjct: 67  MSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGKLFEWRG 126

Query: 130 QDKLSLRHDQNERDV-----PSYNH------------------FGLSNLEITSSPYEIRL 186
                L H   E ++      S  H                   G  +  +  SPYE R+
Sbjct: 127 NTGEELLHKYKETEITRTKTTSQEHGFVEVVSMESGKEANGGVGGRESFGVMKSPYENRI 186

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 70/103 (67.96%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 13  RRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDRISI 72
           R+GPW E ED QL   V   GER+WD IAK SGL R+GKSCR RW+NYL P LK  R+S 
Sbjct: 9   RKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSP 68

Query: 73  EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
            EE +IL+LH +WGN+WSRIAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 69  HEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-37
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 10  EIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDR 69
           E  R+GPW E ED QL   V   G+R+WD +AK SGL R+GKSCR RW+NYL P LK  R
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 70  ISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
           +S +EE +I++LH +WGN+WSRIAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.5e-37
Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 7   LHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLK 66
           +  E  R+GPW E ED  L  FV+  G+R+WD IAK SGL R+GKSCR RW+NYL P LK
Sbjct: 2   MQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 61

Query: 67  CDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
             +++ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 62  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 110

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-36
Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 10  EIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDR 69
           E  R+GPW E ED  L  FV+  G+R+WD +AK SGL R+GKSCR RW+NYL P LK  +
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 70  ISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
           ++ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy TrEMBL
Match: A0A6J1KW53 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111498725 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 4.3e-132
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL
Sbjct: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120

Query: 121 EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE 180
           EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE
Sbjct: 121 EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE 180

Query: 181 VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE
Sbjct: 181 VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 222

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy TrEMBL
Match: A0A6J1FF95 (transcription factor MYB27-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443404 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.6e-116
Identity = 200/222 (90.09%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSAL TEIQRRGPWLE EDRQLTMFV RMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRP+LK DRI+ EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE 180
           E CKVKHGK +KLSLRHDQNERDVP YNHF LSNLEITSSPYE RLSNWISN LMNEKQE
Sbjct: 121 EDCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYETRLSNWISNPLMNEKQE 180

Query: 181 VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           VNHHE CN+ EFCFYYPNMNYA R DQ DHFWDS TPLWDIE
Sbjct: 181 VNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 222

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy TrEMBL
Match: A0A6J1FER8 (transcription factor MYB27-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443404 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.1e-114
Identity = 200/228 (87.72%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSAL TEIQRRGPWLE EDRQLTMFV RMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRP+LK DRI+ EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EA------CKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQL 180
           E       CKVKHGK +KLSLRHDQNERDVP YNHF LSNLEITSSPYE RLSNWISN L
Sbjct: 121 EGSWKNLHCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYETRLSNWISNPL 180

Query: 181 MNEKQEVNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           MNEKQEVNHHE CN+ EFCFYYPNMNYA R DQ DHFWDS TPLWDIE
Sbjct: 181 MNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 228

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy TrEMBL
Match: A0A5D3DPF8 (Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002860 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.4e-95
Identity = 181/240 (75.42%), Postives = 193/240 (80.42%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MA  SAL TE  RRGPWLE EDRQLT+FV RMGERKWD IAKASGLERSGKSCRFRWLNY
Sbjct: 1   MANQSALQTERLRRGPWLEAEDRQLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRPNLK DRI+ EEEEIILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EACKVKHGKQDKLSL----------RHDQNER-DVP----SYNH--FGLSNLEITSSPYE 180
           E  KV+HGKQDK+SL          RHD NER D+P    S NH  FG SN EITSSPYE
Sbjct: 121 EGNKVEHGKQDKVSLKKCGLLGSPNRHDHNERKDIPFCNISCNHFDFGFSNFEITSSPYE 180

Query: 181 IRLSNWISNQLMNEKQEV-NHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           IR+SNWIS+QL N K EV +HHE CNSL+FCF YPNMN+A R D  DHFWDS   LWD+E
Sbjct: 181 IRVSNWISHQLTNGKPEVIDHHEDCNSLDFCFCYPNMNFAERDDLTDHFWDSLASLWDME 240

[Close]

BLAST of CmaCh06G004020.1 vs. ExPASy TrEMBL
Match: A0A1S3B717 (transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103486512 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.4e-95
Identity = 181/240 (75.42%), Postives = 193/240 (80.42%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MA  SAL TE  RRGPWLE EDRQLT+FV RMGERKWD IAKASGLERSGKSCRFRWLNY
Sbjct: 1   MANQSALQTERLRRGPWLEAEDRQLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRPNLK DRI+ EEEEIILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EACKVKHGKQDKLSL----------RHDQNER-DVP----SYNH--FGLSNLEITSSPYE 180
           E  KV+HGKQDK+SL          RHD NER D+P    S NH  FG SN EITSSPYE
Sbjct: 121 EGNKVEHGKQDKVSLKKCGLLGSPNRHDHNERKDIPFCNISCNHFDFGFSNFEITSSPYE 180

Query: 181 IRLSNWISNQLMNEKQEV-NHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           IR+SNWIS+QL N K EV +HHE CNSL+FCF YPNMN+A R D  DHFWDS   LWD+E
Sbjct: 181 IRVSNWISHQLTNGKPEVIDHHEDCNSLDFCFCYPNMNFAERDDLTDHFWDSLASLWDME 240

[Close]

BLAST of CmaCh06G004020.1 vs. NCBI nr
Match: XP_023005846.1 (transcription factor MYB114-like [Cucurbita maxima])

HSP 1 Score: 480.3 bits (1235), Expect = 8.8e-132
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL
Sbjct: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120

Query: 121 EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE 180
           EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE
Sbjct: 121 EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE 180

Query: 181 VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE
Sbjct: 181 VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 222

[Close]

BLAST of CmaCh06G004020.1 vs. NCBI nr
Match: XP_022936985.1 (transcription factor MYB27-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 200/222 (90.09%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSAL TEIQRRGPWLE EDRQLTMFV RMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRP+LK DRI+ EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EACKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQE 180
           E CKVKHGK +KLSLRHDQNERDVP YNHF LSNLEITSSPYE RLSNWISN LMNEKQE
Sbjct: 121 EDCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYETRLSNWISNPLMNEKQE 180

Query: 181 VNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           VNHHE CN+ EFCFYYPNMNYA R DQ DHFWDS TPLWDIE
Sbjct: 181 VNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 222

[Close]

BLAST of CmaCh06G004020.1 vs. NCBI nr
Match: XP_022936978.1 (transcription factor MYB27-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 421.0 bits (1081), Expect = 6.3e-114
Identity = 200/228 (87.72%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSAL TEIQRRGPWLE EDRQLTMFV RMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRP+LK DRI+ EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EA------CKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQL 180
           E       CKVKHGK +KLSLRHDQNERDVP YNHF LSNLEITSSPYE RLSNWISN L
Sbjct: 121 EGSWKNLHCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYETRLSNWISNPL 180

Query: 181 MNEKQEVNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           MNEKQEVNHHE CN+ EFCFYYPNMNYA R DQ DHFWDS TPLWDIE
Sbjct: 181 MNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 228

[Close]

BLAST of CmaCh06G004020.1 vs. NCBI nr
Match: KAG6596493.1 (Transcription factor MYB27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 200/223 (89.69%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSAL TEIQRRGPWLE EDRQLTMFV RMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRP+LK DRI+ EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EA-CKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYEIRLSNWISNQLMNEKQ 180
           E  CKVKHGKQ K SL HDQNERDVP YNHF LSNLEITSSPYE RLSNWISNQLMNEKQ
Sbjct: 121 EEDCKVKHGKQYKPSLSHDQNERDVPLYNHFELSNLEITSSPYETRLSNWISNQLMNEKQ 180

Query: 181 EVNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
           EVNHHE CN+ EFCFYYPNMNYA R DQ DHFWDS TPLWDIE
Sbjct: 181 EVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 223

[Close]

BLAST of CmaCh06G004020.1 vs. NCBI nr
Match: KAG7028040.1 (Transcription factor MYB27 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418.3 bits (1074), Expect = 4.1e-113
Identity = 201/239 (84.10%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSAL TEIQRRGPWLE EDRQLTMFV RMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120
           LRP+LK DRI+ EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EA-----------------CKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYE 180
           E                  CKVKH KQ+KLSLRHDQNERDVP YNHF LSNLEITSSPYE
Sbjct: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180

Query: 181 IRLSNWISNQLMNEKQEVNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 223
            RLSNWISNQLMNEKQEVNHHE CN+ EFCFYYPNMNYA R DQ DHFWDS TPLWDIE
Sbjct: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 239

[Close]

BLAST of CmaCh06G004020.1 vs. TAIR 10
Match: AT3G53200.1 (myb domain protein 27 )

HSP 1 Score: 162.5 bits (410), Expect = 3.8e-40
Identity = 89/199 (44.72%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 10  EIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDR 69
           E  RRGPWLE ED +L   ++ +GER+WDS+A  SGL+RSGKSCR RW+NYL P LK   
Sbjct: 7   ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKRGP 66

Query: 70  ISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHLEACKVKHGK 129
           +S EEE II +LH  WGNKWS+IAR LPGRTDNEIKNYWR+H RKK          +   
Sbjct: 67  MSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGKLFEWRG 126

Query: 130 QDKLSLRHDQNERDV-----PSYNH------------------FGLSNLEITSSPYEIRL 186
                L H   E ++      S  H                   G  +  +  SPYE R+
Sbjct: 127 NTGEELLHKYKETEITRTKTTSQEHGFVEVVSMESGKEANGGVGGRESFGVMKSPYENRI 186

[Close]

BLAST of CmaCh06G004020.1 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 155.6 bits (392), Expect = 4.6e-38
Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 7   LHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLK 66
           +  E  R+GPW E ED  L  FV+  G+R+WD IAK SGL R+GKSCR RW+NYL P LK
Sbjct: 2   MQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 61

Query: 67  CDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
             +++ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 62  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 110

[Close]

BLAST of CmaCh06G004020.1 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 154.8 bits (390), Expect = 7.9e-38
Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 10  EIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDR 69
           E  R+GPW E ED  L  FV+  G+R+WD +AK SGL R+GKSCR RW+NYL P LK  +
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 70  ISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
           ++ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of CmaCh06G004020.1 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-37
Identity = 73/136 (53.68%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 10  EIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDR 69
           E+ R+GPW   EDR L  +V   GE +W+S++K +GL+R+GKSCR RW+NYLRP+LK  +
Sbjct: 4   EVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRGQ 63

Query: 70  ISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKF-PIHLEACKVKHG 129
           I+  EE IIL+LH KWGN+WS IAR LPGRTDNEIKNYWR+H +KK  P    A K+   
Sbjct: 64  ITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKI--- 123

Query: 130 KQDKLSLRHDQNERDV 145
           K   L  +H + +R++
Sbjct: 124 KSRLLKRQHFKEQREI 136

[Close]

BLAST of CmaCh06G004020.1 vs. TAIR 10
Match: AT3G30210.1 (myb domain protein 121 )

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36
Identity = 77/160 (48.12%), Postives = 102/160 (63.75%), Query Frame = 0


Query: 13  RRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPNLKCDRISI 72
           R+GPW   ED+ L  +V   GE +W ++AK +GL RSGKSCR RW+NYLRP LK  +I+ 
Sbjct: 28  RKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKRGQITP 87

Query: 73  EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHLEACKVKHG---K 132
           +EE IIL+LH  WGNKWS IAR+LPGRTDNEIKNYWR+H +K      +  KVK     K
Sbjct: 88  QEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSSKQDKVKKSLSRK 147

Query: 133 QDKLSLR------HDQNERDVPSYNHFGLSN-LEITSSPY 163
           Q ++ L+       + ++  + S +H  + N   I SS Y
Sbjct: 148 QQQVDLKPQPQAQSENHQSQLVSQDHMNIDNDHNIASSLY 187

The following BLAST results are available for this feature:

BLAST of CmaCh06G004020.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCP1	5.3e-39	44.72	Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1	[more]
Q4JL76	1.3e-37	67.96	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q53NK6	2.9e-37	64.15	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE...	[more]
Q9LX82	6.5e-37	61.47	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q4JL84	1.1e-36	62.26	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]

BLAST of CmaCh06G004020.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KW53	4.3e-132	100.00	transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111498725 PE=...	[more]
A0A6J1FF95	5.6e-116	90.09	transcription factor MYB27-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FER8	3.1e-114	87.72	transcription factor MYB27-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5D3DPF8	2.4e-95	75.42	Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B717	2.4e-95	75.42	transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103486512 PE=4 SV...	[more]

BLAST of CmaCh06G004020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005846.1	8.8e-132	100.00	transcription factor MYB114-like [Cucurbita maxima]	[more]
XP_022936985.1	1.2e-115	90.09	transcription factor MYB27-like isoform X2 [Cucurbita moschata]	[more]
XP_022936978.1	6.3e-114	87.72	transcription factor MYB27-like isoform X1 [Cucurbita moschata]	[more]
KAG6596493.1	1.1e-113	89.69	Transcription factor MYB27, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028040.1	4.1e-113	84.10	Transcription factor MYB27 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh06G004020.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53200.1	3.8e-40	44.72	myb domain protein 27	[more]
AT3G46130.1	4.6e-38	61.47	myb domain protein 48	[more]
AT5G59780.3	7.9e-38	62.26	myb domain protein 59	[more]
AT4G13480.1	3.9e-37	53.68	myb domain protein 79	[more]
AT3G30210.1	1.1e-36	48.13	myb domain protein 121	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 3.6E-11 score: 53.1 coord: 13..63 e-value: 4.6E-12 score: 56.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 9.570025
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 10.522243
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 79..112 e-value: 2.23898E-6 score: 41.407
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 2.12999E-7 score: 44.1034
None	No IPR available	GENE3D	1.10.10.60		coord: 71..145 e-value: 5.6E-18 score: 66.8
None	No IPR available	GENE3D	1.10.10.60		coord: 14..66 e-value: 3.7E-16 score: 60.8
None	No IPR available	PANTHER	PTHR10641:SF1230	MYB TRANSCRIPTION FACTOR	coord: 2..221
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 2..221
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 2.1E-12 score: 47.0 coord: 73..112 e-value: 1.4E-12 score: 47.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 15.531857
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 21.824045
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 13..108

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G004020	CmaCh06G004020	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G004020.1:exon:3187	CmaCh06G004020.1:exon:3187	exon
CmaCh06G004020.1:exon:3188	CmaCh06G004020.1:exon:3188	exon
CmaCh06G004020.1:exon:3189	CmaCh06G004020.1:exon:3189	exon
CmaCh06G004020.1:exon:3190	CmaCh06G004020.1:exon:3190	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G004020.1:cds	CmaCh06G004020.1:cds	CDS
CmaCh06G004020.1:cds	CmaCh06G004020.1:cds_2	CDS
CmaCh06G004020.1:cds	CmaCh06G004020.1:cds_3	CDS
CmaCh06G004020.1:cds	CmaCh06G004020.1:cds_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G004020.1:three_prime_utr	CmaCh06G004020.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G004020.1	CmaCh06G004020.1-protein	polypeptide