CmaCh06G003240.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G003240.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein SLOW GREEN 1, chloroplastic-like
Location	Cma_Chr06: 1527099 .. 1528172 (+)
Sequence length	1074
RNA-Seq Expression	CmaCh06G003240.1
Synteny	CmaCh06G003240.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCTTGGTAAGCTGCAGCACTGCCACCAGTCCCTTCACCTTCTTGTCAACGGTGTCCCCTGGATTTCAAAACCAATTTCTTATCTTAGCATCAGAACTCCACTGCCGGTACCGTCGTCGTCGTCGTACAGATCGTCATCTGTTAGAGCCTTGAAGCGATCACCGTCGTTACCCTTCGACTCGTTTTGTCAAGCTCCACGACGGCGTGGGCCTTCACTCCCCCAAATTCTAGACCCCATTTCCTCGTCGATCCTCAAAACCACCTGCGTCACTTTTGCCGCCGCCGCCGCCGCCGCCTTGTTTTTTATGCGGTTTTGCGGCAAACCTGCTGTTGCAGCCCCAATTCCTCCGCCTACGGTGGAATCTGTGAAGGAATCAACGGATGGTGAAGAAGATAAAGAGAGGGCACTTGAAGAACAACTGGTACACAATCCCAATGACGTTGAAGCTCTTGGATCGCTCATGGAGGTGAGAGTTAAGTCTCGCAAGTTTCCTGAAGCGATTAAAATATTAGACCGTTTAATTGAACTTGAGCCCGATGACTTAGAATGGCTAGTATTGAAGGCCAACGTTTATATTCATATTGGCGATTCTGAATTGGCGAGAAAGGAATTTGAGAGGATTTTATTGAAGGATCCTTTTCAGGCTGAGGCCTATCATGGGCTTGTAATGTTGACGGAGACATCAGATACTGATTCATTGAAGGCGATTCTGAATAGGGTTGAAGGGGCATTAGAACATTGCAAGAAACTTAAAGGGAAATCGGAGGAAAGGGACTTTAAGCTCTTGATAGCTCAAATTAAAGTTATGGAGGGTAGTTACTCTGAAGCACTGAAAGATTACCAAGAACTAGAGAGGGAGGAGCCGAGGGATTTTAGGCCACATTTGTGTCAGGGAATTCTTTATACTCTGCTTAAGAAGAATGATGAGGCTGAGAAACAATTTGAGATATTTCGAAGGCTTGTTCCGAAGAACCATCCCTACAAAGAATATTTTGATGAAAACATGTTTTCAACCAAGCATTTCGTACAACAAATTGAGAGGGATGCATCGACTTCAAATCACTGA

mRNA sequence

ATGGATTCTCTTGGTAAGCTGCAGCACTGCCACCAGTCCCTTCACCTTCTTGTCAACGGTGTCCCCTGGATTTCAAAACCAATTTCTTATCTTAGCATCAGAACTCCACTGCCGGTACCGTCGTCGTCGTCGTACAGATCGTCATCTGTTAGAGCCTTGAAGCGATCACCGTCGTTACCCTTCGACTCGTTTTGTCAAGCTCCACGACGGCGTGGGCCTTCACTCCCCCAAATTCTAGACCCCATTTCCTCGTCGATCCTCAAAACCACCTGCGTCACTTTTGCCGCCGCCGCCGCCGCCGCCTTGTTTTTTATGCGGTTTTGCGGCAAACCTGCTGTTGCAGCCCCAATTCCTCCGCCTACGGTGGAATCTGTGAAGGAATCAACGGATGGTGAAGAAGATAAAGAGAGGGCACTTGAAGAACAACTGGTACACAATCCCAATGACGTTGAAGCTCTTGGATCGCTCATGGAGGTGAGAGTTAAGTCTCGCAAGTTTCCTGAAGCGATTAAAATATTAGACCGTTTAATTGAACTTGAGCCCGATGACTTAGAATGGCTAGTATTGAAGGCCAACGTTTATATTCATATTGGCGATTCTGAATTGGCGAGAAAGGAATTTGAGAGGATTTTATTGAAGGATCCTTTTCAGGCTGAGGCCTATCATGGGCTTGTAATGTTGACGGAGACATCAGATACTGATTCATTGAAGGCGATTCTGAATAGGGTTGAAGGGGCATTAGAACATTGCAAGAAACTTAAAGGGAAATCGGAGGAAAGGGACTTTAAGCTCTTGATAGCTCAAATTAAAGTTATGGAGGGTAGTTACTCTGAAGCACTGAAAGATTACCAAGAACTAGAGAGGGAGGAGCCGAGGGATTTTAGGCCACATTTGTGTCAGGGAATTCTTTATACTCTGCTTAAGAAGAATGATGAGGCTGAGAAACAATTTGAGATATTTCGAAGGCTTGTTCCGAAGAACCATCCCTACAAAGAATATTTTGATGAAAACATGTTTTCAACCAAGCATTTCGTACAACAAATTGAGAGGGATGCATCGACTTCAAATCACTGA

Coding sequence (CDS)

ATGGATTCTCTTGGTAAGCTGCAGCACTGCCACCAGTCCCTTCACCTTCTTGTCAACGGTGTCCCCTGGATTTCAAAACCAATTTCTTATCTTAGCATCAGAACTCCACTGCCGGTACCGTCGTCGTCGTCGTACAGATCGTCATCTGTTAGAGCCTTGAAGCGATCACCGTCGTTACCCTTCGACTCGTTTTGTCAAGCTCCACGACGGCGTGGGCCTTCACTCCCCCAAATTCTAGACCCCATTTCCTCGTCGATCCTCAAAACCACCTGCGTCACTTTTGCCGCCGCCGCCGCCGCCGCCTTGTTTTTTATGCGGTTTTGCGGCAAACCTGCTGTTGCAGCCCCAATTCCTCCGCCTACGGTGGAATCTGTGAAGGAATCAACGGATGGTGAAGAAGATAAAGAGAGGGCACTTGAAGAACAACTGGTACACAATCCCAATGACGTTGAAGCTCTTGGATCGCTCATGGAGGTGAGAGTTAAGTCTCGCAAGTTTCCTGAAGCGATTAAAATATTAGACCGTTTAATTGAACTTGAGCCCGATGACTTAGAATGGCTAGTATTGAAGGCCAACGTTTATATTCATATTGGCGATTCTGAATTGGCGAGAAAGGAATTTGAGAGGATTTTATTGAAGGATCCTTTTCAGGCTGAGGCCTATCATGGGCTTGTAATGTTGACGGAGACATCAGATACTGATTCATTGAAGGCGATTCTGAATAGGGTTGAAGGGGCATTAGAACATTGCAAGAAACTTAAAGGGAAATCGGAGGAAAGGGACTTTAAGCTCTTGATAGCTCAAATTAAAGTTATGGAGGGTAGTTACTCTGAAGCACTGAAAGATTACCAAGAACTAGAGAGGGAGGAGCCGAGGGATTTTAGGCCACATTTGTGTCAGGGAATTCTTTATACTCTGCTTAAGAAGAATGATGAGGCTGAGAAACAATTTGAGATATTTCGAAGGCTTGTTCCGAAGAACCATCCCTACAAAGAATATTTTGATGAAAACATGTTTTCAACCAAGCATTTCGTACAACAAATTGAGAGGGATGCATCGACTTCAAATCACTGA

Protein sequence

MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLPFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPPTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH

Homology

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BLAST of CmaCh06G003240.1 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.3e-31
Identity = 85/233 (36.48%), Postives = 131/233 (56.22%), Query Frame = 0


Query: 113 VAAPIPPPTVESVKESTDGEEDKE-RALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIK 172
           V A  P  T+E   E    E+  E   L E L   P  VE L SL++ +++  +  EA+K
Sbjct: 80  VKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALK 139

Query: 173 ILDRLIELEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETS 232
           +L+RL+  +P++ EW  L A +   +G  E AR+ FE IL ++P   EA     +L + S
Sbjct: 140 LLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEALFENALLMDRS 199

Query: 233 DTDSLKAILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEP 292
              +  A+L R+E AL   +      E RD +L+IAQI  ++ +  EALK Y++L +E+P
Sbjct: 200 GEGN--AVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDP 259

Query: 293 RDFRPHLCQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHF 345
           +DFRP+ C+G++Y+LL KN EA++QF  +R L PK    + Y    +   K F
Sbjct: 260 KDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRTPLSKMKLF 310

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BLAST of CmaCh06G003240.1 vs. ExPASy Swiss-Prot
Match: P55727 (Uncharacterized protein y4yS OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a00520 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.1e-04
Identity = 28/94 (29.79%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 131 GEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELEPDDLEWLVLK 190
           GE+ +ERAL + L  +P +V+A   L +  V  ++  EA+++LD ++ + PD+L  L  K
Sbjct: 70  GEDAQERALRDDLKQHPGNVDAAIRLTKALVAQKRPHEALQVLDNVLVVTPDNLRALNAK 129

Query: 191 ANVYIHIGDSELARKEFERILLKDPFQAEAYHGL 225
           A +    G  + A++ + + L  +P     +H L
Sbjct: 130 AVILDIEGRHDAAQELYRQALETNPENQMLHHNL 163

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BLAST of CmaCh06G003240.1 vs. ExPASy TrEMBL
Match: A0A6J1L0L6 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498766 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 1.9e-198
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP 60
           MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP
Sbjct: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP 60

Query: 61  FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP 120
           FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP
Sbjct: 61  FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP 120

Query: 121 TVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELE 180
           TVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELE
Sbjct: 121 TVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELE 180

Query: 181 PDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAIL 240
           PDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAIL
Sbjct: 181 PDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAIL 240

Query: 241 NRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQ 300
           NRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQ
Sbjct: 241 NRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQ 300

Query: 301 GILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           GILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH
Sbjct: 301 GILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 357

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BLAST of CmaCh06G003240.1 vs. ExPASy TrEMBL
Match: A0A6J1GJ39 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111454326 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.5e-191
Identity = 347/358 (96.93%), Postives = 352/358 (98.32%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS-YRSSSVRALKRSPSL 60
           MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS Y+SSSVRA KRSPSL
Sbjct: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSLYKSSSVRASKRSPSL 60

Query: 61  PFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPP 120
            FDSFCQAPRRRGPSLPQILDPISSSILKTTC+TF AAAAA LFFMRFC KPA+AAPIPP
Sbjct: 61  SFDSFCQAPRRRGPSLPQILDPISSSILKTTCITF-AAAAATLFFMRFCAKPAIAAPIPP 120

Query: 121 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIEL 180
           PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVK+RKFPEAIKILDRLIEL
Sbjct: 121 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKARKFPEAIKILDRLIEL 180

Query: 181 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 240
           EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI
Sbjct: 181 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 240

Query: 241 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLC 300
           LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRP+LC
Sbjct: 241 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPYLC 300

Query: 301 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH
Sbjct: 301 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 357

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BLAST of CmaCh06G003240.1 vs. ExPASy TrEMBL
Match: A0A6J1CVG3 (protein SLOW GREEN 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111014942 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.9e-145
Identity = 275/362 (75.97%), Postives = 307/362 (84.81%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISY--LSIRTPLPVPSSSSYRSSSVRALKRSPS 60
           MDSLG+LQ CHQ+ HL V+  PW SKP+S      R P+   SSSS++SSS++      S
Sbjct: 8   MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASSSSSSFQSSSLKL-----S 67

Query: 61  LPFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIP 120
              DSF +   RR PSLPQILDP+SSSI KT+C+TF  AAAAALF  RFCGKPA+AAPIP
Sbjct: 68  CSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTF--AAAAALFVTRFCGKPAIAAPIP 127

Query: 121 PPTVESVKESTDGE---EDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDR 180
           PPTVESVKE TDGE   E+KER LEEQLV+NPND+EAL SLMEVR+++RKFPEA+ ILDR
Sbjct: 128 PPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLMEVRLRARKFPEAVNILDR 187

Query: 181 LIELEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDS 240
           LIELEPDDLEWLVLKANVY H+G+SELARKEFERIL KDPFQ EAYHGLVMLTE SDT S
Sbjct: 188 LIELEPDDLEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSS 247

Query: 241 LKAILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFR 300
           L+ IL R+E AL +CKK K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFR
Sbjct: 248 LREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFR 307

Query: 301 PHLCQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTS 358
           P+LCQGILYTLL+KNDEAEKQFEIFRRLVPKNHPYKEYFDENMF+TKHFVQQIERDA+ S
Sbjct: 308 PYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGS 362

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BLAST of CmaCh06G003240.1 vs. ExPASy TrEMBL
Match: A0A5D3DP70 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001920 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.3e-140
Identity = 275/360 (76.39%), Postives = 299/360 (83.06%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP 60
           M+SLG+LQHCH         +P  SKP+S LS RT L +PS SS   SS RA     S  
Sbjct: 1   MESLGRLQHCHH--------LPSFSKPLSSLSFRTRLSIPSPSS--KSSSRAFPSFLSSS 60

Query: 61  FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP 120
            DS  Q PRR   SL QILDPISSS+LKTTCVT     AAALFFMRFCGKPA+AAPIPPP
Sbjct: 61  LDSVFQTPRRPRSSLTQILDPISSSVLKTTCVTL--TTAAALFFMRFCGKPAIAAPIPPP 120

Query: 121 TVESVKESTDGEE---DKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLI 180
           TVESV+EST  E    +KE  LEE+LV+N NDVEAL SL+EV VK+RKFPEAIKILDRLI
Sbjct: 121 TVESVEESTKDEASRGEKETVLEEELVNNSNDVEALQSLIEVNVKARKFPEAIKILDRLI 180

Query: 181 ELEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLK 240
           +LEP+DLEWLVLKANV+ H+GDSELARKEF++IL KDPFQ EAYHGLVMLTETSD DSLK
Sbjct: 181 KLEPNDLEWLVLKANVHSHVGDSELARKEFQKILEKDPFQVEAYHGLVMLTETSDIDSLK 240

Query: 241 AILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPH 300
           AIL RVE ALEHCKK KGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRP+
Sbjct: 241 AILIRVEEALEHCKKYKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPY 300

Query: 301 LCQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           LCQGILYTLLKKNDEAEKQFE+FRRLVPKNHPYKEYFDENMF+TK  VQQIERDA+ SN+
Sbjct: 301 LCQGILYTLLKKNDEAEKQFEVFRRLVPKNHPYKEYFDENMFATKQLVQQIERDAAASNN 348

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BLAST of CmaCh06G003240.1 vs. ExPASy TrEMBL
Match: A0A1S3B6T4 (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486414 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.3e-140
Identity = 275/360 (76.39%), Postives = 299/360 (83.06%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP 60
           M+SLG+LQHCH         +P  SKP+S LS RT L +PS SS   SS RA     S  
Sbjct: 1   MESLGRLQHCHH--------LPSFSKPLSSLSFRTRLSIPSPSS--KSSSRAFPSFLSSS 60

Query: 61  FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP 120
            DS  Q PRR   SL QILDPISSS+LKTTCVT     AAALFFMRFCGKPA+AAPIPPP
Sbjct: 61  LDSVFQTPRRPRSSLTQILDPISSSVLKTTCVTL--TTAAALFFMRFCGKPAIAAPIPPP 120

Query: 121 TVESVKESTDGEE---DKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLI 180
           TVESV+EST  E    +KE  LEE+LV+N NDVEAL SL+EV VK+RKFPEAIKILDRLI
Sbjct: 121 TVESVEESTKDEASRGEKETVLEEELVNNSNDVEALQSLIEVNVKARKFPEAIKILDRLI 180

Query: 181 ELEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLK 240
           +LEP+DLEWLVLKANV+ H+GDSELARKEF++IL KDPFQ EAYHGLVMLTETSD DSLK
Sbjct: 181 KLEPNDLEWLVLKANVHSHVGDSELARKEFQKILEKDPFQVEAYHGLVMLTETSDIDSLK 240

Query: 241 AILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPH 300
           AIL RVE ALEHCKK KGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRP+
Sbjct: 241 AILIRVEEALEHCKKYKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPY 300

Query: 301 LCQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           LCQGILYTLLKKNDEAEKQFE+FRRLVPKNHPYKEYFDENMF+TK  VQQIERDA+ SN+
Sbjct: 301 LCQGILYTLLKKNDEAEKQFEVFRRLVPKNHPYKEYFDENMFATKQLVQQIERDAAASNN 348

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BLAST of CmaCh06G003240.1 vs. NCBI nr
Match: XP_023005898.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima] >XP_023005899.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima] >XP_023005900.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 701.4 bits (1809), Expect = 3.9e-198
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP 60
           MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP
Sbjct: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLP 60

Query: 61  FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP 120
           FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP
Sbjct: 61  FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPP 120

Query: 121 TVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELE 180
           TVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELE
Sbjct: 121 TVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELE 180

Query: 181 PDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAIL 240
           PDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAIL
Sbjct: 181 PDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAIL 240

Query: 241 NRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQ 300
           NRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQ
Sbjct: 241 NRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQ 300

Query: 301 GILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           GILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH
Sbjct: 301 GILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 357

[Close]

BLAST of CmaCh06G003240.1 vs. NCBI nr
Match: KAG7027970.1 (protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 681.0 bits (1756), Expect = 5.5e-192
Identity = 350/358 (97.77%), Postives = 354/358 (98.88%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS-YRSSSVRALKRSPSL 60
           MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS Y+SSSVRALKRSPSL
Sbjct: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSLYKSSSVRALKRSPSL 60

Query: 61  PFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPP 120
            FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTF AAAAA LFFMRFCGKPA+AAPIPP
Sbjct: 61  SFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTF-AAAAATLFFMRFCGKPAIAAPIPP 120

Query: 121 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIEL 180
           PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVK+RKFPEAIKILDRLIEL
Sbjct: 121 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKARKFPEAIKILDRLIEL 180

Query: 181 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 240
           EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI
Sbjct: 181 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 240

Query: 241 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLC 300
           LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRP+LC
Sbjct: 241 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPYLC 300

Query: 301 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH
Sbjct: 301 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 357

[Close]

BLAST of CmaCh06G003240.1 vs. NCBI nr
Match: KAG6596428.1 (protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 679.5 bits (1752), Expect = 1.6e-191
Identity = 349/358 (97.49%), Postives = 353/358 (98.60%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS-YRSSSVRALKRSPSL 60
           MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS Y+SSSVRALKRSPSL
Sbjct: 55  MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSLYKSSSVRALKRSPSL 114

Query: 61  PFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPP 120
            FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTF AAAAA LFFMRFCGKP +AAPIPP
Sbjct: 115 SFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTF-AAAAATLFFMRFCGKPTIAAPIPP 174

Query: 121 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIEL 180
           PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVK+RKFPEAIKILDRLIEL
Sbjct: 175 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKARKFPEAIKILDRLIEL 234

Query: 181 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 240
           EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI
Sbjct: 235 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 294

Query: 241 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLC 300
           LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRP+LC
Sbjct: 295 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPYLC 354

Query: 301 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH
Sbjct: 355 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 411

[Close]

BLAST of CmaCh06G003240.1 vs. NCBI nr
Match: XP_022951549.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 676.0 bits (1743), Expect = 1.8e-190
Identity = 347/358 (96.93%), Postives = 352/358 (98.32%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS-YRSSSVRALKRSPSL 60
           MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSS Y+SSSVRA KRSPSL
Sbjct: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSLYKSSSVRASKRSPSL 60

Query: 61  PFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPP 120
            FDSFCQAPRRRGPSLPQILDPISSSILKTTC+TF AAAAA LFFMRFC KPA+AAPIPP
Sbjct: 61  SFDSFCQAPRRRGPSLPQILDPISSSILKTTCITF-AAAAATLFFMRFCAKPAIAAPIPP 120

Query: 121 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIEL 180
           PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVK+RKFPEAIKILDRLIEL
Sbjct: 121 PTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKARKFPEAIKILDRLIEL 180

Query: 181 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 240
           EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI
Sbjct: 181 EPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAI 240

Query: 241 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLC 300
           LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRP+LC
Sbjct: 241 LNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPYLC 300

Query: 301 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH
Sbjct: 301 QGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 357

[Close]

BLAST of CmaCh06G003240.1 vs. NCBI nr
Match: XP_023539835.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023539836.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023539838.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023539839.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 667.5 bits (1721), Expect = 6.2e-188
Identity = 344/359 (95.82%), Postives = 348/359 (96.94%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVP--SSSSYRSSSVRALKRSPS 60
           MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVP  SSSSY+SSSVRALKRSPS
Sbjct: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPISYLSIRTPLPVPSSSSSSYKSSSVRALKRSPS 60

Query: 61  LPFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIP 120
           L FDSFCQAPRRRGPSLPQILDPISSSILKTTCVTF    AAALFFMRFCGKPA+AAPIP
Sbjct: 61  LSFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTF----AAALFFMRFCGKPAIAAPIP 120

Query: 121 PPTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIE 180
           PPTVESVKESTDGEEDKERALEEQLVHNPNDVEALG LMEVRVK+RKFPEAIKILDRLIE
Sbjct: 121 PPTVESVKESTDGEEDKERALEEQLVHNPNDVEALGLLMEVRVKARKFPEAIKILDRLIE 180

Query: 181 LEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKA 240
           LEPDDLEWLVLKANVYIHIGDSELARKEFERIL KDPFQAEAYHGLVMLTETSDTDSLKA
Sbjct: 181 LEPDDLEWLVLKANVYIHIGDSELARKEFERILSKDPFQAEAYHGLVMLTETSDTDSLKA 240

Query: 241 ILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHL 300
           ILNRVE ALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRP+L
Sbjct: 241 ILNRVERALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPYL 300

Query: 301 CQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERDASTSNH 358
           CQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDEN FSTKHFVQQIERDASTSNH
Sbjct: 301 CQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENTFSTKHFVQQIERDASTSNH 355

[Close]

BLAST of CmaCh06G003240.1 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-81
Identity = 182/356 (51.12%), Postives = 244/356 (68.54%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVN--GVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPS 60
           M+SLGKLQ   Q  HL        +  KP S+ S+R+ LP  S+SS++  S++A   S S
Sbjct: 1   MESLGKLQLHQQPNHLSFTHFSSSFPKKPSSF-SLRS-LP-RSTSSFKCISIKA---SSS 60

Query: 61  LPFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPI- 120
              DS                     SILK+TCV+F AAAA  L  ++    PA+AAP+ 
Sbjct: 61  KSQDS-------------------KLSILKSTCVSFTAAAALFLVNLQLKPSPAIAAPVA 120

Query: 121 PPPTVESVKESTDGE--EDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDR 180
             P +ES+K+S      E++ER+LEE L  +P+DVEAL SLMEVR+KSRK  EAI+++DR
Sbjct: 121 ATPLMESLKQSNGNVSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDR 180

Query: 181 LIELEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDS 240
           LIELEP++ EW +LKAN++ + GD E A+  FE IL+KDP + EAYHGLVM    S  D 
Sbjct: 181 LIELEPEEKEWPMLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSG-DD 240

Query: 241 LKAILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFR 300
           L A+  R+E A+  CKK K + + RDFKLL+AQI+V+EG ++EALK Y+EL +EEPRDFR
Sbjct: 241 LNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFR 300

Query: 301 PHLCQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERD 352
           P+LCQGI+YT+LKK +EAEKQFE FRRLVPKNHPY+EYF +NM ++K F ++++R+
Sbjct: 301 PYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQRE 330

[Close]

BLAST of CmaCh06G003240.1 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 5.1e-79
Identity = 171/353 (48.44%), Postives = 237/353 (67.14%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHLLVNGVPWISKPIS-YLSIRTPLPVPSSSSYRSSSVRALKRSPSL 60
           M+SLGKLQ  HQ  HL        + P + + S   P+    S+S ++SS +       L
Sbjct: 1   MESLGKLQLHHQPFHLSFTHTSSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPL 60

Query: 61  PFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPI-P 120
           P  +    P R               + K+TC+T   AAA  L  +     PA+AAPI P
Sbjct: 61  PKST----PFR---------------LFKSTCITLTTAAALLLANLHL-KSPAIAAPIAP 120

Query: 121 PPTVESVKESTDGEEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIE 180
           PP+VES +  T   E++ERAL+E L+ +P+DV+AL SLMEV++KSRK  EA++++DRLI+
Sbjct: 121 PPSVESKENVT--LEEEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIK 180

Query: 181 LEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTETSDTDSLKA 240
           LEP++ EW VLKAN++ + GD +LA+  FE IL KDP + EAYHGL+M    +  D LK 
Sbjct: 181 LEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAGLD-LKE 240

Query: 241 ILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHL 300
           + +R+E A+  CKK   +++ RDFKLL+AQI+V+EG +SEALK YQEL +EEPRDFRP+L
Sbjct: 241 VESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYL 300

Query: 301 CQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFSTKHFVQQIERD 352
           CQGI+YTLLKK D+AE+QF+ FR+LVPKNHPY+EYF +NM +TK F ++ +R+
Sbjct: 301 CQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLFSEKAQRE 330

[Close]

BLAST of CmaCh06G003240.1 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-68
Identity = 158/351 (45.01%), Postives = 211/351 (60.11%), Query Frame = 0


Query: 1   MDSLGKLQHCHQSLHL-LVNGVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSL 60
           M SL K  +C Q+LHL L        KP+SY  +  P P        S  +RA       
Sbjct: 1   MVSLAKFHYCDQTLHLRLDTHRKPQPKPVSYRILHKPPP--------SRVIRA------- 60

Query: 61  PFDSFCQAPRRRGPSLPQILDPISSSILKTTCVTFAAAAAAALFFMRFCGKPAVAAPI-- 120
              SF   P+               S LKTTCVT   AAA     +    KP  AA +  
Sbjct: 61  --SSFSSNPK--------------PSFLKTTCVTLTTAAALLSASLHLSTKPVTAATLVS 120

Query: 121 PPPTVESVKESTDG-------EEDKERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAI 180
           PPP   +  + T         EE++E ALE+ L  NPNDVEAL SLM+++ +++    A+
Sbjct: 121 PPPPPSTAADLTSDQISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHAL 180

Query: 181 KILDRLIELEPDDLEWLVLKANVYIHIGDSELARKEFERILLKDPFQAEAYHGLVMLTET 240
           +IL+RLIE++P++ EW +LKA V  + GD + A K FE +L KDPF+ EAYHGLVM    
Sbjct: 181 EILNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSE 240

Query: 241 SDTDSLKAILNRVEGALEHCKKLKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREE 300
           S++  L  I +R+  A+E CKK + K + RDF LLIAQI+V++G+  EAL+ YQEL ++E
Sbjct: 241 SES-KLSEIESRINEAIEKCKK-ENKKDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDE 300

Query: 301 PRDFRPHLCQGILYTLLKKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFST 342
           P+DFRP+LCQG++YTL+KK DEAEKQF  FRRLVP+NHPYKEY D N+ +T
Sbjct: 301 PKDFRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNT 318

[Close]

BLAST of CmaCh06G003240.1 vs. TAIR 10
Match: AT3G09490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 7.2e-41
Identity = 103/248 (41.53%), Postives = 142/248 (57.26%), Query Frame = 0


Query: 85  SILKTTCVTFAAAAAAALFFMRFCGKPAVAAPIPPPTVESVKESTDGEEDKERALEEQLV 144
           S+LKTT ++  AAAA       F  K A   P+      +V E+T         LE+ L 
Sbjct: 63  SLLKTTFISLTAAAALFSASFYFVNKRAAMTPV------AVVETT---------LEKHLE 122

Query: 145 HNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELEPDDLEWLVLKANVYIHIGDSELAR 204
              NDV AL  L E++ KS K  +AI  LDRLIE+EP + +W  +KA +  + G SE A 
Sbjct: 123 TQSNDVNALSLLTEIKFKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSESAI 182

Query: 205 KEFERILLKDPFQAEAYHGLVMLTETSDTDSLKAILNRVEGALEHCKKLKGKSEERDFKL 264
           + FE IL KDP + +AYH LVM    S    L  I  R+   +  CKK K   E   F++
Sbjct: 183 EAFEEILEKDPIRVDAYHYLVMEYYNS-KPKLTEIEKRINKVIRRCKKEKKTKEILGFRM 242

Query: 265 LIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQGILYTLLKKNDEAEKQFEIFRRLV 324
           LIAQI+ +EG   EA++  +EL +E+P DF  +L QG++YTL+ K +EA KQFE   R++
Sbjct: 243 LIAQIRFIEGKSVEAIRICEELVKEDPNDFTIYLFQGVVYTLMNKGEEAAKQFEHVARVI 294

Query: 325 PKNHPYKE 333
           P+NHP +E
Sbjct: 303 PRNHPSRE 294

[Close]

BLAST of CmaCh06G003240.1 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-35
Identity = 103/323 (31.89%), Postives = 174/323 (53.87%), Query Frame = 0


Query: 20  GVPWISKPISYLSIRTPLPVPSSSSYRSSSVRALKRSPSLPFDSFCQAPRRRGPSLPQIL 79
           GV  +  P  +   R    + + +  R+ +    +   S PF      P    P LP I 
Sbjct: 5   GVTALCSPAKFHHRREQSLIFTPTHLRNPNGFQFRWRKSRPFAPRLAQPDNFAPPLPLIR 64

Query: 80  DPISSSILKTTCVTFAAAAAAAL----FFMRFC-GKPAVAAPIPPPTVESVKESTDGEED 139
              S    K      A  AA  L     F+ FC  KPA+A  +P  TV S  E  D    
Sbjct: 65  SSTSLLSSKDFVQMLARKAAILLVGSFVFLGFCSSKPALA--LPTATVVSQAELED---- 124

Query: 140 KERALEEQLVHNPNDVEALGSLMEVRVKSRKFPEAIKILDRLIELEPDDLEWLVLKANVY 199
            E+  E+ L + P ++EA+ +++  +++  K  +A+K +++L++LEP ++EW +L+A  Y
Sbjct: 125 -EKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCY 184

Query: 200 IHIGDSELARKEFERILLKDPFQAEAYHGLVM-LTETSDTDSLKAILNRVEGALEHCKKL 259
             +G+   A++ ++ IL + P    A HGL M + +T DT    ++ + +  A+E  ++ 
Sbjct: 185 ETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHDT----SVFDMLIEAMEVARQG 244

Query: 260 KGKSEERDFKLLIAQIKVMEGSYSEALKDYQELEREEPRDFRPHLCQGILYTLLKKNDEA 319
              +EER+ ++LI Q+ ++EG + E LK +Q++  + PRDFRP+LCQGI+Y+L+ K +EA
Sbjct: 245 NRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEA 304

Query: 320 EKQFEIFRRLVPKNHPYKEYFDE 337
            +QFEI+  LVP   P K + D+
Sbjct: 305 AQQFEIYWSLVPGEFPQKGFLDD 316

The following BLAST results are available for this feature:

BLAST of CmaCh06G003240.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	2.3e-31	36.48	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]
P55727	3.1e-04	29.79	Uncharacterized protein y4yS OS=Sinorhizobium fredii (strain NBRC 101917 / NGR23...	[more]

BLAST of CmaCh06G003240.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0L6	1.9e-198	100.00	protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1GJ39	8.5e-191	96.93	protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1CVG3	1.9e-145	75.97	protein SLOW GREEN 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5D3DP70	2.3e-140	76.39	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352...	[more]
A0A1S3B6T4	2.3e-140	76.39	protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486414 PE=4...	[more]

BLAST of CmaCh06G003240.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005898.1	3.9e-198	100.00	protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima] >XP_023005899.1 prot...	[more]
KAG7027970.1	5.5e-192	97.77	protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6596428.1	1.6e-191	97.49	protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022951549.1	1.8e-190	96.93	protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023539835.1	6.2e-188	95.82	protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023539...	[more]

BLAST of CmaCh06G003240.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37400.1	1.1e-81	51.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	5.1e-79	48.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	1.1e-68	45.01	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G09490.1	7.2e-41	41.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	2.6e-35	31.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 269..289
None	No IPR available	PFAM	PF14559	TPR_19	coord: 163..224 e-value: 1.2E-7 score: 32.2
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 46..349
None	No IPR available	PANTHER	PTHR26312:SF162	BNAA03G17190D PROTEIN	coord: 46..349
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 260..293 e-value: 90.0 score: 6.6 coord: 184..217 e-value: 84.0 score: 6.8 coord: 150..183 e-value: 21.0 score: 12.1 coord: 294..327 e-value: 38.0 score: 9.8
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 150..183 score: 8.9094
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 133..352 e-value: 3.5E-27 score: 97.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 139..328

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G003240	CmaCh06G003240	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G003240.1:exon:3383	CmaCh06G003240.1:exon:3383	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G003240.1:cds	CmaCh06G003240.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G003240.1	CmaCh06G003240.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding