CmaCh06G002850.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G002850.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type E3 ubiquitin transferase
Location	Cma_Chr06: 1381447 .. 1382488 (+)
Sequence length	993
RNA-Seq Expression	CmaCh06G002850.1
Synteny	CmaCh06G002850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACCACGACGACGCTTCCGAACCAGTCCCTTTCTTCGTGCCGAGATTGCGTCGCAGCGGAAGAAATAGCGAGGATCGCTCCCCTTTCAATCGTATCATTGTTCTACGCAACCCCTCTAATGTTGGCGCTATTAGTAATAATGATATTGGAGGTGGAGGAAATTATGAGATTTATTATGATGATGGTACCGGGGCTAGCCTGCGCCCTTTGCCTTATAATATATCCGAGTTCTTGATGGGAACGGGGTTTGATCGTCTTCTCAATCAATTAGCGCAGCTGGAGGTGAACGGGGTTAGCCCATTGGAACAACCACCGGCTTCTAAGGCTGCAATCGAATCATTGCCTGTGGTTAAGATTCTTGATAGTCATGTGCCTATGGAATCGCATTGTGCGGTCTGTAAGGAGCCATTTGAGCTCGACTCTGAAGCTCGAGAAATGCCGTGTAAGCATATTTACCATTCGGATTGCATACTTCCTTGGCTTTCTATCCGGAATTCTTGTCCTGTTTGTAGGCACCAGTTGCCTACCAACAGTGGCAGAAGCTCCCCTGCGTCTGCTGAAGACATTGTTGGATTAACAATTTGGAGGCTTCCGGGTGGGGGATTTGCTGTTGGAAGGTTTACTTGGGGTAGGGAAGCTACCCAACATAACCTTCCTGTTGTTTACACTGAAATTGATGGTAGTTTTAGTACCACCAGTGGTGTTCCAAGGAGGATTACATGGGCGTCAAGCGGAGGAAGATCAAACGAAGGTGGTGGTTTTCGTCGTCTTCTACGCAGTTTCTCCTCCTTTTTTGGGAGGTTTAGAAGTTCATCCCGTCGTTCTAGTTCGGGACCTGGTTTGATATGAAGGAGCTTCTCTGCTACGTTAGTTAATAGACGCTCAAGGAGGAATAATCACCCTATGGCCTCCGAGTCCGAGGCGAACTATAAGTTTCCTTCTTAGTTATACTTATACAGAGGTTGAATTCCCACACCATGTACTCTCTTTAGAAATTGCACGACACAGAATGCATAACGGCCCTTTGGACGACGTGTAG

mRNA sequence

ATGTACCACGACGACGCTTCCGAACCAGTCCCTTTCTTCGTGCCGAGATTGCGTCGCAGCGGAAGAAATAGCGAGGATCGCTCCCCTTTCAATCGTATCATTGTTCTACGCAACCCCTCTAATGTTGGCGCTATTAGTAATAATGATATTGGAGGTGGAGGAAATTATGAGATTTATTATGATGATGGTACCGGGGCTAGCCTGCGCCCTTTGCCTTATAATATATCCGAGTTCTTGATGGGAACGGGGTTTGATCGTCTTCTCAATCAATTAGCGCAGCTGGAGGTGAACGGGGTTAGCCCATTGGAACAACCACCGGCTTCTAAGGCTGCAATCGAATCATTGCCTGTGGTTAAGATTCTTGATAGTCATGTGCCTATGGAATCGCATTGTGCGGTCTGTAAGGAGCCATTTGAGCTCGACTCTGAAGCTCGAGAAATGCCGTGTAAGCATATTTACCATTCGGATTGCATACTTCCTTGGCTTTCTATCCGGAATTCTTGTCCTGTTTGTAGGCACCAGTTGCCTACCAACAGTGGCAGAAGCTCCCCTGCGTCTGCTGAAGACATTGTTGGATTAACAATTTGGAGGCTTCCGGGTGGGGGATTTGCTGTTGGAAGGTTTACTTGGGGTAGGGAAGCTACCCAACATAACCTTCCTGTTGTTTACACTGAAATTGATGGTAGTTTTAGTACCACCAGTGGTGTTCCAAGGAGGATTACATGGGCGTCAAGCGGAGGAAGATCAAACGAAGGTGGTGGTTTTCGTCGTCTTCTACGCAGTTTCTCCTCCTTTTTTGGGAGGTTTAGAAGTTCATCCCGTCGTTCTAGTTCGGGACCTGGAGGAATAATCACCCTATGGCCTCCGAGTCCGAGGCGAACTATAAGTTTCCTTCTTAGTTATACTTATACAGAGGTTGAATTCCCACACCATGTACTCTCTTTAGAAATTGCACGACACAGAATGCATAACGGCCCTTTGGACGACGTGTAG

Coding sequence (CDS)

ATGTACCACGACGACGCTTCCGAACCAGTCCCTTTCTTCGTGCCGAGATTGCGTCGCAGCGGAAGAAATAGCGAGGATCGCTCCCCTTTCAATCGTATCATTGTTCTACGCAACCCCTCTAATGTTGGCGCTATTAGTAATAATGATATTGGAGGTGGAGGAAATTATGAGATTTATTATGATGATGGTACCGGGGCTAGCCTGCGCCCTTTGCCTTATAATATATCCGAGTTCTTGATGGGAACGGGGTTTGATCGTCTTCTCAATCAATTAGCGCAGCTGGAGGTGAACGGGGTTAGCCCATTGGAACAACCACCGGCTTCTAAGGCTGCAATCGAATCATTGCCTGTGGTTAAGATTCTTGATAGTCATGTGCCTATGGAATCGCATTGTGCGGTCTGTAAGGAGCCATTTGAGCTCGACTCTGAAGCTCGAGAAATGCCGTGTAAGCATATTTACCATTCGGATTGCATACTTCCTTGGCTTTCTATCCGGAATTCTTGTCCTGTTTGTAGGCACCAGTTGCCTACCAACAGTGGCAGAAGCTCCCCTGCGTCTGCTGAAGACATTGTTGGATTAACAATTTGGAGGCTTCCGGGTGGGGGATTTGCTGTTGGAAGGTTTACTTGGGGTAGGGAAGCTACCCAACATAACCTTCCTGTTGTTTACACTGAAATTGATGGTAGTTTTAGTACCACCAGTGGTGTTCCAAGGAGGATTACATGGGCGTCAAGCGGAGGAAGATCAAACGAAGGTGGTGGTTTTCGTCGTCTTCTACGCAGTTTCTCCTCCTTTTTTGGGAGGTTTAGAAGTTCATCCCGTCGTTCTAGTTCGGGACCTGGAGGAATAATCACCCTATGGCCTCCGAGTCCGAGGCGAACTATAAGTTTCCTTCTTAGTTATACTTATACAGAGGTTGAATTCCCACACCATGTACTCTCTTTAGAAATTGCACGACACAGAATGCATAACGGCCCTTTGGACGACGTGTAG

Protein sequence

MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYYDDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKILDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRITWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPGGIITLWPPSPRRTISFLLSYTYTEVEFPHHVLSLEIARHRMHNGPLDDV

Homology

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BLAST of CmaCh06G002850.1 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-66
Identity = 142/275 (51.64%), Postives = 174/275 (63.27%), Query Frame = 0


Query: 22  RNSEDRSPFNRIIVLRNPSNVGAIS--NNDIGGGGN-----YEIYYDDGTGASLRPLPYN 81
           R S  R+ FN +IVL      GA     N+ G G       YE YYDDG+G+ LRPLP +
Sbjct: 97  RRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGLRPLPDS 156

Query: 82  ISEFLMGTGFDRLLNQLAQLEV--NGVSPLEQPPASKAAIESLPVVKILDSHVPMESHCA 141
           +SE LMG+GF+RLL QL+Q+E   NG+     PPASK+AIESLP V+I D H   E++CA
Sbjct: 157 VSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCA 216

Query: 142 VCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSPASAEDIVG 201
           VC E FE   E REMPCKHI+H DCI+PWLSIRNSCPVCR +LP++  + S    E  VG
Sbjct: 217 VCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRS-NEEEHAVG 276

Query: 202 LTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRITW---------A 261
           +TIWRLPGGGFAVGRF  G    +  LPVV TE+DG    ++  PRRI+W         +
Sbjct: 277 MTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWVRAHETPEMS 336

Query: 262 SSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSS 279
            +GGRS  GG  RR +R   SF  R R S   S+S
Sbjct: 337 RNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNS 370

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.9e-65
Identity = 145/294 (49.32%), Postives = 181/294 (61.56%), Query Frame = 0


Query: 14  VPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGN-------YEIYYDDGTGA 73
           V R RRSGR    R  FN +IVL+     G     + G  G+       +E YYDDG+G+
Sbjct: 82  VIRRRRSGR----RPSFNPVIVLQ-----GGAGEREEGEEGDAARDRRAFEFYYDDGSGS 141

Query: 74  SLRPLPYNISEFLMGTGFDRLLNQLAQLEVN--GVSPLEQPPASKAAIESLPVVKILDSH 133
            LRPLP ++SE LMG+GF+RLL QL+Q+E +  G+     PPASK+AIESLP V+I D H
Sbjct: 142 GLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCH 201

Query: 134 VPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSP 193
           +  E++CAVC E FE ++EAREMPCKH++H DCI+PWLSIRNSCPVCR +LP+   R S 
Sbjct: 202 IGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSN 261

Query: 194 ASAED-IVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEID-GSFSTTSGVPRRITW 253
            + ED  VG+TIWRLPGGGFAVGRF       +  LPVV TE+D G    +   PRRI+W
Sbjct: 262 NNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRISW 321

Query: 254 ASS-----------GGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPGGIIT 286
             S           G  S  GG  RR++R   S   R R  +R SSS    I T
Sbjct: 322 VRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVR-PNRSSSSSSAAIST 365

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BLAST of CmaCh06G002850.1 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-64
Identity = 151/329 (45.90%), Postives = 195/329 (59.27%), Query Frame = 0


Query: 3   HDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGG---GNYEIY 62
           H D S P P  V R R       +RSP N +IVLR   +  A S++ +  G     +++Y
Sbjct: 75  HADNS-PTPTIVTRTR------SNRSP-NPVIVLR--GSAAAPSSDVVSEGLDRSAFQMY 134

Query: 63  YDDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVN---GVSPLEQPPASKAAIESLP 122
           YDDGT + LRPLP +++EFL+G+GFDRLL+Q++Q+E+N    +   E PPASK+AIE+LP
Sbjct: 135 YDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALP 194

Query: 123 VVKILDSHV--PMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQ 182
           +++I  +H+    +SHCAVCKE F L S AREMPC HIYH DCILPWL+IRNSCPVCRH+
Sbjct: 195 LIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHE 254

Query: 183 LPTNSGRSSPASA------------EDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVV 242
           LP         +A            +   GLTIWRLPGGGFAVGR   G       +PVV
Sbjct: 255 LPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVV 314

Query: 243 YTEIDGSFSTTSGVPRRITWAS------SGGRSNEGGGFR-RLLRSFSSFFGRFRS--SS 302
           YTE+DG       +PRR+ W S       GG    GGGF  R++R F  F G   S  ++
Sbjct: 315 YTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAA 374

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.8e-28
Identity = 57/109 (52.29%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 71  LPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKILDSHVPME-S 130
           LP NI ++ +G G ++L+ QLA+ + N       PPASK+AIE+LP+V I  S++  E +
Sbjct: 166 LPANIGDYFIGPGLEQLIQQLAENDPNRYG---TPPASKSAIEALPLVNITKSNLNSEFN 225

Query: 131 HCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTN 179
            CAVC + FE  +EA++MPCKH+YH DC+LPWL + NSCPVCRH+LPT+
Sbjct: 226 QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTD 271

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 74  NISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKILDSHV-PMESHCA 133
           N  ++  G G + L+ QL+    +G      PPA K++I++LP +KI   H+   +SHC 
Sbjct: 132 NAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCP 191

Query: 134 VCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSPASAED 190
           VCK+ FEL SEA++MPC HIYHSDCI+PWL   NSCPVCR +LP+    SS  S+++
Sbjct: 192 VCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQN 244

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy TrEMBL
Match: A0A6J1I914 (E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC111470273 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.7e-161
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY
Sbjct: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 180
           LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG
Sbjct: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 180

Query: 181 RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 240
           RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI
Sbjct: 181 RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 240

Query: 241 TWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 282
           TWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG
Sbjct: 241 TWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 281

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy TrEMBL
Match: A0A6J1CXJ7 (probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC111015120 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.9e-138
Identity = 243/284 (85.56%), Postives = 260/284 (91.55%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS+P P FVPRLRRS RN EDR+PFNRIIVLR+PSN GAISNN IG GGNYEIYY
Sbjct: 1   MYHDDASDPDPSFVPRLRRSRRNGEDRAPFNRIIVLRDPSNAGAISNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTG++LRPLP NISEFLMG+GFDRLLNQLAQLEVNGV  LE PPASKAAIESLPVVKI
Sbjct: 61  DDGTGSTLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGSLEHPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTN-- 180
           L SHVP+ESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPT+  
Sbjct: 121 LASHVPVESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTDGH 180

Query: 181 -SGRSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVP 240
            SGRSSPASAE++VGLTIWRLPGGGFAVGRFTWGR A +H+LPVVYTEIDG FSTTSG+P
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 282
           RRI+WASSG RS+EGGGFRR+ R+F SFFGRFRSSS  SSSG G
Sbjct: 241 RRISWASSGRRSSEGGGFRRVFRNFFSFFGRFRSSSHHSSSGTG 284

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy TrEMBL
Match: A0A1S3B6J2 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.3e-134
Identity = 239/286 (83.57%), Postives = 253/286 (88.46%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS P P FVPRLRRSGRN EDRSPFNR IVLR+PSN G +SNN IG GGNYEI+ 
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLP NISEFLMG+GFDRLLNQLA+LEVN VSPLE PPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPT--- 180
           L SHVPMESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLPT   
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 NSGRSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVP 240
           +SGR+SPASAE++VGLTIWRLPG GFAVGRFTWGR A +H+LPVVYTEIDG FSTTSG+P
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPGGI 284
           RRITW SSG RS E GGFRRL R+  SF GRFRSSSR S SGPG +
Sbjct: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSM 286

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy TrEMBL
Match: A0A5A7TL92 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001550 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.3e-134
Identity = 239/286 (83.57%), Postives = 253/286 (88.46%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS P P FVPRLRRSGRN EDRSPFNR IVLR+PSN G +SNN IG GGNYEI+ 
Sbjct: 30  MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 89

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLP NISEFLMG+GFDRLLNQLA+LEVN VSPLE PPASKAAIESLPVVKI
Sbjct: 90  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 149

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPT--- 180
           L SHVPMESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLPT   
Sbjct: 150 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 209

Query: 181 NSGRSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVP 240
           +SGR+SPASAE++VGLTIWRLPG GFAVGRFTWGR A +H+LPVVYTEIDG FSTTSG+P
Sbjct: 210 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 269

Query: 241 RRITWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPGGI 284
           RRITW SSG RS E GGFRRL R+  SF GRFRSSSR S SGPG +
Sbjct: 270 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSM 315

[Close]

BLAST of CmaCh06G002850.1 vs. ExPASy TrEMBL
Match: A0A0A0LFJ3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 5.2e-134
Identity = 237/286 (82.87%), Postives = 255/286 (89.16%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS P P FVPRLRRSGRN EDRS FNRIIVLR+PSN G +SNN IGGGGNYEI+ 
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLP N+SEFLMG+GFDRLLNQLAQLEVNGVSPLE PPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPT--- 180
           L +HV +ESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLPT   
Sbjct: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 NSGRSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVP 240
           +SGR+SPASAE++VGLTIWRLPG GFAVGRFTWGR A +H+LPVVYTEIDG FSTTSG+P
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPGGI 284
           RRITW SSG RS+E GGFR + R+  SFFGRFRSSSR S SGPG +
Sbjct: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSV 286

[Close]

BLAST of CmaCh06G002850.1 vs. NCBI nr
Match: XP_022971599.1 (E3 ubiquitin-protein ligase RDUF1-like [Cucurbita maxima])

HSP 1 Score: 578.6 bits (1490), Expect = 3.5e-161
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY
Sbjct: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 180
           LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG
Sbjct: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 180

Query: 181 RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 240
           RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI
Sbjct: 181 RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 240

Query: 241 TWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 282
           TWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG
Sbjct: 241 TWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 281

[Close]

BLAST of CmaCh06G002850.1 vs. NCBI nr
Match: XP_023540034.1 (E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo] >XP_023540035.1 E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo] >XP_023540036.1 E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo] >XP_023540037.1 E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo] >XP_023540038.1 E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo] >XP_023540039.1 E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo] >XP_023540041.1 E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.7 bits (1454), Expect = 5.3e-157
Identity = 273/281 (97.15%), Postives = 278/281 (98.93%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS+P PFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY
Sbjct: 1   MYHDDASDPDPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLPYNISEFLMG+GFDRLLNQLAQLEVNGV+PLEQPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPYNISEFLMGSGFDRLLNQLAQLEVNGVNPLEQPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 180
           LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG
Sbjct: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 180

Query: 181 RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 240
           RSSPASAE++VGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI
Sbjct: 181 RSSPASAEEVVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 240

Query: 241 TWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 282
           TWASS GRSNEGGGFRRL RSFSSFFGRFRSSSRRSSSGPG
Sbjct: 241 TWASSRGRSNEGGGFRRLRRSFSSFFGRFRSSSRRSSSGPG 281

[Close]

BLAST of CmaCh06G002850.1 vs. NCBI nr
Match: KAG6596400.1 (E3 ubiquitin-protein ligase RDUF2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 513.5 bits (1321), Expect = 1.4e-141
Identity = 245/251 (97.61%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS+P PFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY
Sbjct: 20  MYHDDASDPDPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 79

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLPYNISEFLMG+GFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI
Sbjct: 80  DDGTGASLRPLPYNISEFLMGSGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 139

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 180
           LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG
Sbjct: 140 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSG 199

Query: 181 RSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 240
           RSSPASAE++VGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI
Sbjct: 200 RSSPASAEEVVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRI 259

Query: 241 TWASSGGRSNE 252
           TWASS GRSNE
Sbjct: 260 TWASSRGRSNE 270

[Close]

BLAST of CmaCh06G002850.1 vs. NCBI nr
Match: XP_038906308.1 (E3 ubiquitin-protein ligase RDUF1-like [Benincasa hispida])

HSP 1 Score: 504.6 bits (1298), Expect = 6.5e-139
Identity = 247/284 (86.97%), Postives = 259/284 (91.20%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS+P P FVPRLRRSGRN EDRSPFNRIIVLR+PSN GAI NN IG GGNYEIYY
Sbjct: 1   MYHDDASDPDPSFVPRLRRSGRNGEDRSPFNRIIVLRDPSNSGAIGNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTGASLRPLP NISEFLMG+GFDRLLNQLAQLEVNGV PLE PPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGPLENPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTN-- 180
           L SHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLP++  
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPSDVH 180

Query: 181 -SGRSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVP 240
            SGRSSPASAE++VGLTIWRLPGGGFAVGRFTWGR A +H+LPVVYTEIDG FSTTSGVP
Sbjct: 181 ISGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVP 240

Query: 241 RRITWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 282
           RRITWASSG RS+E GGFRR+ R+F SFF RFRSSSR S SG G
Sbjct: 241 RRITWASSGRRSSESGGFRRIFRNFFSFFRRFRSSSRHSGSGHG 284

[Close]

BLAST of CmaCh06G002850.1 vs. NCBI nr
Match: XP_022145737.1 (probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia])

HSP 1 Score: 500.4 bits (1287), Expect = 1.2e-137
Identity = 243/284 (85.56%), Postives = 260/284 (91.55%), Query Frame = 0


Query: 1   MYHDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGNYEIYY 60
           MYHDDAS+P P FVPRLRRS RN EDR+PFNRIIVLR+PSN GAISNN IG GGNYEIYY
Sbjct: 1   MYHDDASDPDPSFVPRLRRSRRNGEDRAPFNRIIVLRDPSNAGAISNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKI 120
           DDGTG++LRPLP NISEFLMG+GFDRLLNQLAQLEVNGV  LE PPASKAAIESLPVVKI
Sbjct: 61  DDGTGSTLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGSLEHPPASKAAIESLPVVKI 120

Query: 121 LDSHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTN-- 180
           L SHVP+ESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPT+  
Sbjct: 121 LASHVPVESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTDGH 180

Query: 181 -SGRSSPASAEDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVP 240
            SGRSSPASAE++VGLTIWRLPGGGFAVGRFTWGR A +H+LPVVYTEIDG FSTTSG+P
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWASSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPG 282
           RRI+WASSG RS+EGGGFRR+ R+F SFFGRFRSSS  SSSG G
Sbjct: 241 RRISWASSGRRSSEGGGFRRVFRNFFSFFGRFRSSSHHSSSGTG 284

[Close]

BLAST of CmaCh06G002850.1 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 255.0 bits (650), Expect = 8.3e-68
Identity = 142/275 (51.64%), Postives = 174/275 (63.27%), Query Frame = 0


Query: 22  RNSEDRSPFNRIIVLRNPSNVGAIS--NNDIGGGGN-----YEIYYDDGTGASLRPLPYN 81
           R S  R+ FN +IVL      GA     N+ G G       YE YYDDG+G+ LRPLP +
Sbjct: 97  RRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGLRPLPDS 156

Query: 82  ISEFLMGTGFDRLLNQLAQLEV--NGVSPLEQPPASKAAIESLPVVKILDSHVPMESHCA 141
           +SE LMG+GF+RLL QL+Q+E   NG+     PPASK+AIESLP V+I D H   E++CA
Sbjct: 157 VSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCA 216

Query: 142 VCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSPASAEDIVG 201
           VC E FE   E REMPCKHI+H DCI+PWLSIRNSCPVCR +LP++  + S    E  VG
Sbjct: 217 VCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRS-NEEEHAVG 276

Query: 202 LTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEIDGSFSTTSGVPRRITW---------A 261
           +TIWRLPGGGFAVGRF  G    +  LPVV TE+DG    ++  PRRI+W         +
Sbjct: 277 MTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWVRAHETPEMS 336

Query: 262 SSGGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSS 279
            +GGRS  GG  RR +R   SF  R R S   S+S
Sbjct: 337 RNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNS 370

[Close]

BLAST of CmaCh06G002850.1 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 250.4 bits (638), Expect = 2.1e-66
Identity = 145/294 (49.32%), Postives = 181/294 (61.56%), Query Frame = 0


Query: 14  VPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGGGN-------YEIYYDDGTGA 73
           V R RRSGR    R  FN +IVL+     G     + G  G+       +E YYDDG+G+
Sbjct: 82  VIRRRRSGR----RPSFNPVIVLQ-----GGAGEREEGEEGDAARDRRAFEFYYDDGSGS 141

Query: 74  SLRPLPYNISEFLMGTGFDRLLNQLAQLEVN--GVSPLEQPPASKAAIESLPVVKILDSH 133
            LRPLP ++SE LMG+GF+RLL QL+Q+E +  G+     PPASK+AIESLP V+I D H
Sbjct: 142 GLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCH 201

Query: 134 VPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSP 193
           +  E++CAVC E FE ++EAREMPCKH++H DCI+PWLSIRNSCPVCR +LP+   R S 
Sbjct: 202 IGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSN 261

Query: 194 ASAED-IVGLTIWRLPGGGFAVGRFTWGREATQHNLPVVYTEID-GSFSTTSGVPRRITW 253
            + ED  VG+TIWRLPGGGFAVGRF       +  LPVV TE+D G    +   PRRI+W
Sbjct: 262 NNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRISW 321

Query: 254 ASS-----------GGRSNEGGGFRRLLRSFSSFFGRFRSSSRRSSSGPGGIIT 286
             S           G  S  GG  RR++R   S   R R  +R SSS    I T
Sbjct: 322 VRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVR-PNRSSSSSSAAIST 365

[Close]

BLAST of CmaCh06G002850.1 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-65
Identity = 151/329 (45.90%), Postives = 195/329 (59.27%), Query Frame = 0


Query: 3   HDDASEPVPFFVPRLRRSGRNSEDRSPFNRIIVLRNPSNVGAISNNDIGGG---GNYEIY 62
           H D S P P  V R R       +RSP N +IVLR   +  A S++ +  G     +++Y
Sbjct: 75  HADNS-PTPTIVTRTR------SNRSP-NPVIVLR--GSAAAPSSDVVSEGLDRSAFQMY 134

Query: 63  YDDGTGASLRPLPYNISEFLMGTGFDRLLNQLAQLEVN---GVSPLEQPPASKAAIESLP 122
           YDDGT + LRPLP +++EFL+G+GFDRLL+Q++Q+E+N    +   E PPASK+AIE+LP
Sbjct: 135 YDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALP 194

Query: 123 VVKILDSHV--PMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQ 182
           +++I  +H+    +SHCAVCKE F L S AREMPC HIYH DCILPWL+IRNSCPVCRH+
Sbjct: 195 LIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHE 254

Query: 183 LPTNSGRSSPASA------------EDIVGLTIWRLPGGGFAVGRFTWGREATQHNLPVV 242
           LP         +A            +   GLTIWRLPGGGFAVGR   G       +PVV
Sbjct: 255 LPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVV 314

Query: 243 YTEIDGSFSTTSGVPRRITWAS------SGGRSNEGGGFR-RLLRSFSSFFGRFRS--SS 302
           YTE+DG       +PRR+ W S       GG    GGGF  R++R F  F G   S  ++
Sbjct: 315 YTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAA 374

[Close]

BLAST of CmaCh06G002850.1 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-27
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 74  NISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKILDSHV-PMESHCA 133
           N  ++  G G + L+ QL+    +G      PPA K++I++LP +KI   H+   +SHC 
Sbjct: 132 NAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCP 191

Query: 134 VCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSPASAED 190
           VCK+ FEL SEA++MPC HIYHSDCI+PWL   NSCPVCR +LP+    SS  S+++
Sbjct: 192 VCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQN 244

[Close]

BLAST of CmaCh06G002850.1 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-27
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 74  NISEFLMGTGFDRLLNQLAQLEVNGVSPLEQPPASKAAIESLPVVKILDSHV-PMESHCA 133
           N  ++  G G + L+ QL+    +G      PPA K++I++LP +KI   H+   +SHC 
Sbjct: 132 NAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCP 191

Query: 134 VCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTNSGRSSPASAED 190
           VCK+ FEL SEA++MPC HIYHSDCI+PWL   NSCPVCR +LP+    SS  S+++
Sbjct: 192 VCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQN 244

The following BLAST results are available for this feature:

BLAST of CmaCh06G002850.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB6	1.2e-66	51.64	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	2.9e-65	49.32	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
O22283	2.4e-64	45.90	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
P0CH30	2.8e-28	52.29	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q94AK4	2.0e-26	47.01	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]

BLAST of CmaCh06G002850.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I914	1.7e-161	100.00	E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC1114702...	[more]
A0A6J1CXJ7	5.9e-138	85.56	probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3B6J2	2.3e-134	83.57	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 P...	[more]
A0A5A7TL92	2.3e-134	83.57	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LFJ3	5.2e-134	82.87	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 P...	[more]

BLAST of CmaCh06G002850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971599.1	3.5e-161	100.00	E3 ubiquitin-protein ligase RDUF1-like [Cucurbita maxima]	[more]
XP_023540034.1	5.3e-157	97.15	E3 ubiquitin-protein ligase RDUF1-like [Cucurbita pepo subsp. pepo] >XP_02354003...	[more]
KAG6596400.1	1.4e-141	97.61	E3 ubiquitin-protein ligase RDUF2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038906308.1	6.5e-139	86.97	E3 ubiquitin-protein ligase RDUF1-like [Benincasa hispida]	[more]
XP_022145737.1	1.2e-137	85.56	probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia]	[more]

BLAST of CmaCh06G002850.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46620.1	8.3e-68	51.64	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G59550.1	2.1e-66	49.32	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	1.7e-65	45.90	RING-H2 finger C2A	[more]
AT3G56580.2	1.4e-27	47.01	RING/U-box superfamily protein	[more]
AT3G56580.1	1.4e-27	47.01	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 131..171 e-value: 2.5E-7 score: 40.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 130..172 e-value: 9.8E-11 score: 41.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 131..172 score: 12.179465
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 96..178 e-value: 2.5E-20 score: 73.9
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 191..278 e-value: 5.0E-32 score: 110.8
None	No IPR available	PANTHER	PTHR15710:SF61	E3 UBIQUITIN-PROTEIN LIGASE RHC2A-RELATED	coord: 15..257
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 15..257
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 131..172 e-value: 1.3377E-23 score: 89.2992
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 111..178

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G002850	CmaCh06G002850	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G002850.1:exon:928	CmaCh06G002850.1:exon:928	exon
CmaCh06G002850.1:exon:927	CmaCh06G002850.1:exon:927	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G002850.1:cds	CmaCh06G002850.1:cds	CDS
CmaCh06G002850.1:cds	CmaCh06G002850.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G002850.1	CmaCh06G002850.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity