CmaCh06G002530.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G002530.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr06: 1263519 .. 1265554 (+)
Sequence length	927
RNA-Seq Expression	CmaCh06G002530.1
Synteny	CmaCh06G002530.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTATGGTGTTTTTTCAACCCACTTCGGCATGCAGCTCATCAGTGACAAGCGTGGAGTTTGACAGAAGCGTGAGATGATTGTACTTTGTTCATAACAACTTTGTTTTCATTTTCTCTAATTCCTGCTAGAGAGATGTATTTAATGAATTTTGGATTTTGTTTGCTATTTGTTTGATGATTACAGGCAAGTTGATAATATATTTATGCAATTCTATCTGATTGAAAAACCTGCGAGACACTTTTTAAATTTCAATGACTAAATAGACACAAATTTAAAACCGATGAACCTAGACAAACTCCTACCAATCGAGAAAAATGTAAAAATTGAATGATAATAGGATACTTGAACAACCTAACTTCTGAAAAATCCTTTGACGATAATACTCTTATCTATATAATATTCTCGAACCTGTCGAATGAAAGTAAAACTTTATCGTTGATCATCAAGTTTAAATATAGACATTCTCAAGCTGGCAGATGCAACCTTGGACAAAATAATGGTTGAAAGTATATGGCAAAAGAAACAAAGCATGCGATGGAAGAACCATCAGTCTTGGCCACTTCCAAAGCTATCTCGGCTATGGCTATCATTCTGCCATCCATGGCCTTGTCCATCATGATCCGTATCTCCTGAATGAAACTTACCATGCTTATTATGCGACAAGTACGGTGGGCGTGGTGGAGGCAGAGGAAGTTGTGCTAGAGGCGGCTGTGGTGCCAATATACCTCTACCATTCTTCAAGTCCATCGCATTACCATAATGTCCCAGGTCCATGCTCTTGTTGGCCATTGACGAGACAGAAGAATTCACAGGCAAGCCTCCAGGGCTGCGTCTATAATCTCCTTGGTAAAATCCATGATTTACTTGAGAATCAGGTGCATTAGCAAAAGCATCAGGCATTCCTTGACCTCCAGCAGCATGCTCATAAGGAACGCCAGCTTGTCCAGTATTCCAAGGTTGAGGATAAGTCGCTGAGAAGTTCATTCCTCCTGCTGCTCCTGGTGGAAAGCCTAGCAGTGACCCTTGCTCGGATCCAGTCTCAGCTGCGGTATCTTGTCGTGGCACTTCATAGGGTGTACTGTAATATTGTTGTGCTCCCTCAGTTGGAAACGGAGGAAAACCGAACGGTAGAGGGGGACTCAACATTGGATTTGAGTTAGCTGGAACCACGTAATTTGGTGGTGGAATTGATTGCAAAGGAGGGTACTGGGAGTATGGAGGGTCGGCCAGAATTCCCTGCTGTTTCTCTGAAAATTGACTGGATTCCTGATGTGGAGGACCCTGTACGTCAAAGTTTTGTGGGGGAAAACGGCCATGAGGGCCATGTCGATCAAAGCCTTGTGAATGACCACCGCTGTCTTGTTGCTGCATGCCAGACGTGGGTTGGTCTCTAGATTGTTGACGATGAAATTTTTCGTCATGTTCTTGAGCCTGGGAATTGGAACTTGGAGATATGATTGGTCTCGATGGACCTCGAACAGTGGATTCAGAAGCTGTAGATTGTTTGGCACTAAGAGCCTCAATTTCGTTTCCATCTTCCATTTCTGCATTTGGCTTAAGAAGTTCAGCATGACTCTCTTGTATATGAGATTCAAATTCAGTCCTCTTAAGAAAAGACTTGAGACAATGTGGGGCTGCACAAATGAAGATCCCCTCCATCAATTTTATAGTTTGAATCTTCTGGATACGGTCATCACAACTGTGTCATAAAAAATATGACTATAATCACAACTTGTAGAGTCGTCTACATTATATTGTCATGAAGTACACAGAAGCTAATGTATAGAGTACTCTAATCATCAAAGAAAACAACAGATTTTTGAAGAAGATGACAAGAAAAGTTTTTGCAATAGAAAGTGATTATGCATGGGCAATCAATATTGACATTGATAGTACAAAAGAACCATAATAGCCCTTTTAAGACCTTCAAAGCATTTTTACTTACAGGTAGCATATAGAATCGCTTCTTGCACAATCGAGACAGAACACATGCTCACATGGGCTCTGCAAGAATGGCAAACCACTATTTAG

mRNA sequence

ATGTTTTATGTATATGGCAAAAGAAACAAAGCATGCGATGGAAGAACCATCAGTCTTGGCCACTTCCAAAGCTATCTCGGCTATGGCTATCATTCTGCCATCCATGGCCTTGTCCATCATGATCCGTATCTCCTGAATGAAACTTACCATGCTTATTATGCGACAAGTACGGTGGGCGTGGTGGAGGCAGAGGAAGTTGTGCTAGAGGCGGCTGTGGTGCCAATATACCTCTACCATTCTTCAAGTCCATCGCATTACCATAATGTCCCAGGTCCATGCTCTTGTTGGCCATTGACGAGACAGAAGAATTCACAGGCAAGCCTCCAGGGCTGCGTCTATAATCTCCTTGGTAAAATCCATGATTTACTTGAGAATCAGCAAAAGCATCAGGCATTCCTTGACCTCCAGCAGCATGCTCATAAGGAACGCCAGCTTGTCCAGTATTCCAAGGTTGAGGATAAGTCGCTGAGAAGTTCATTCCTCCTGCTGCTCCTGGTGGAAAGCCTAGCAGTGACCCTTGCTCGGATCCAGTCTCAGCTGCGGTATCTTGTCGTGGCACTTCATAGGGTGTACTGTAATATTGTTGTGCTCCCTCAGTTGGAAACGGAGGAAAACCGAACGCTGGAACCACGTAATTTGGTGGTGGAATTGATTGCAAAGGAGGGTACTGGGAGTATGGAGGGTCGGCCAGAATTCCCTGCTGTTTCTCTGAAAATTGACTGGATTCCTGATGTGGAGGACCCTGTACGTCAAAGTTTTGTGGGGGAAAACGGCCATGAGGGCCATGTCGATCAAAGCCTTGTGAATGACCACCGCTGTCTTGTTGCTGCATGCCAGACGTGGGTAGCATATAGAATCGCTTCTTGCACAATCGAGACAGAACACATGCTCACATGGGCTCTGCAAGAATGGCAAACCACTATTTAG

Coding sequence (CDS)

ATGTTTTATGTATATGGCAAAAGAAACAAAGCATGCGATGGAAGAACCATCAGTCTTGGCCACTTCCAAAGCTATCTCGGCTATGGCTATCATTCTGCCATCCATGGCCTTGTCCATCATGATCCGTATCTCCTGAATGAAACTTACCATGCTTATTATGCGACAAGTACGGTGGGCGTGGTGGAGGCAGAGGAAGTTGTGCTAGAGGCGGCTGTGGTGCCAATATACCTCTACCATTCTTCAAGTCCATCGCATTACCATAATGTCCCAGGTCCATGCTCTTGTTGGCCATTGACGAGACAGAAGAATTCACAGGCAAGCCTCCAGGGCTGCGTCTATAATCTCCTTGGTAAAATCCATGATTTACTTGAGAATCAGCAAAAGCATCAGGCATTCCTTGACCTCCAGCAGCATGCTCATAAGGAACGCCAGCTTGTCCAGTATTCCAAGGTTGAGGATAAGTCGCTGAGAAGTTCATTCCTCCTGCTGCTCCTGGTGGAAAGCCTAGCAGTGACCCTTGCTCGGATCCAGTCTCAGCTGCGGTATCTTGTCGTGGCACTTCATAGGGTGTACTGTAATATTGTTGTGCTCCCTCAGTTGGAAACGGAGGAAAACCGAACGCTGGAACCACGTAATTTGGTGGTGGAATTGATTGCAAAGGAGGGTACTGGGAGTATGGAGGGTCGGCCAGAATTCCCTGCTGTTTCTCTGAAAATTGACTGGATTCCTGATGTGGAGGACCCTGTACGTCAAAGTTTTGTGGGGGAAAACGGCCATGAGGGCCATGTCGATCAAAGCCTTGTGAATGACCACCGCTGTCTTGTTGCTGCATGCCAGACGTGGGTAGCATATAGAATCGCTTCTTGCACAATCGAGACAGAACACATGCTCACATGGGCTCTGCAAGAATGGCAAACCACTATTTAG

Protein sequence

MFYVYGKRNKACDGRTISLGHFQSYLGYGYHSAIHGLVHHDPYLLNETYHAYYATSTVGVVEAEEVVLEAAVVPIYLYHSSSPSHYHNVPGPCSCWPLTRQKNSQASLQGCVYNLLGKIHDLLENQQKHQAFLDLQQHAHKERQLVQYSKVEDKSLRSSFLLLLLVESLAVTLARIQSQLRYLVVALHRVYCNIVVLPQLETEENRTLEPRNLVVELIAKEGTGSMEGRPEFPAVSLKIDWIPDVEDPVRQSFVGENGHEGHVDQSLVNDHRCLVAACQTWVAYRIASCTIETEHMLTWALQEWQTTI

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh06G002530.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G002530.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G002530.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G002530.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G002530	CmaCh06G002530	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G002530.1:exon:1020	CmaCh06G002530.1:exon:1020	exon
CmaCh06G002530.1:exon:1019	CmaCh06G002530.1:exon:1019	exon
CmaCh06G002530.1:exon:1018	CmaCh06G002530.1:exon:1018	exon
CmaCh06G002530.1:exon:1017	CmaCh06G002530.1:exon:1017	exon
CmaCh06G002530.1:exon:1016	CmaCh06G002530.1:exon:1016	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G002530.1:cds	CmaCh06G002530.1:cds	CDS
CmaCh06G002530.1:cds	CmaCh06G002530.1:cds_2	CDS
CmaCh06G002530.1:cds	CmaCh06G002530.1:cds_3	CDS
CmaCh06G002530.1:cds	CmaCh06G002530.1:cds_4	CDS
CmaCh06G002530.1:cds	CmaCh06G002530.1:cds_5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G002530.1	CmaCh06G002530.1-protein	polypeptide