CmaCh06G001950.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G001950.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr06: 992193 .. 992966 (-)
Sequence length	444
RNA-Seq Expression	CmaCh06G001950.1
Synteny	CmaCh06G001950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGTCTGAATCCGATACGATTAATTCCACCAAAAGCAATTGCAACGAGAACGTCAAAACCACTCATGCGACTTACATCTCTACCCTCCACGTGTGCAATCCTTATTGGATTATAAATGTTTTAAATTTTAATTTATTTTTTGGGTTTTGAATTTTCATTTCAAAATTATCCAAAGTCCTCGTCGGAACAGAACTTGGAATTATCTCGCAGCAGAGTGCTTCTTTCTCCTCAGTGGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGCCATTTCTAGTGAGAGAAACATAGAGCTTTACTCTATTTGTTTTCCTTCCCTCTTATGGCTTAAGATTCTTGTTCAACTATGGCAATAAGAATCAAGCTCCAGGCTCCAAGTTAGATAACGACCCCATGGATTTTTGCGGACGAAAAGTTTCCTCGGAATTTTTGGCGTCAACTGTAAGTTATTTTGTTTGATTATTTGCTAGGGTTAGGCGGATGAGAAGGCTTTGAAATCAAGCAAAGCTATGCGCAGAGTCACAAACTGGTGATTCGCCGGATGTTTTACAAGGATTAAATACTGTCCGGTAGATTGAAAAAAAGGGGGCCAAGCTATGAACATAGCTTTTTTATTATAATAACTGCTTTTCTTTCACCTGTATAAGCTTTTTCTGCTCTGAATGGTTCATATATGCAACCGAGTATCAATGGTTACAACAGCTGAGATTTAGTTTGGTGATTTTAAGACGTTCTTCTGATTGGAAACCGAGATATGTGAATGAGTGA

mRNA sequence

ATGGGTTTGTCTGAATCCGATACGATTAATTCCACCAAAAGCAATTGCAACGAGAACGTCAAAACCACTCATGCGACTTACATCTCTACCCTCCACTCCTCGTCGGAACAGAACTTGGAATTATCTCGCAGCAGAGTGCTTCTTTCTCCTCAATTCTTGTTCAACTATGGCAATAAGAATCAAGCTCCAGGCTCCAAGTTAGATAACGACCCCATGGATTTTTGCGGACGAAAAGTTTCCTCGGAATTTTTGGCGTCAACTCTATGCGCAGAGTCACAAACTGGTGATTCGCCGGATGTTTTACAAGGATTAAATACTGTCCGCTTTTTCTGCTCTGAATGGTTCATATATGCAACCGAGTATCAATGGTTACAACAGCTGAGATTTAGTTTGGTGATTTTAAGACGTTCTTCTGATTGGAAACCGAGATATGTGAATGAGTGA

Coding sequence (CDS)

ATGGGTTTGTCTGAATCCGATACGATTAATTCCACCAAAAGCAATTGCAACGAGAACGTCAAAACCACTCATGCGACTTACATCTCTACCCTCCACTCCTCGTCGGAACAGAACTTGGAATTATCTCGCAGCAGAGTGCTTCTTTCTCCTCAATTCTTGTTCAACTATGGCAATAAGAATCAAGCTCCAGGCTCCAAGTTAGATAACGACCCCATGGATTTTTGCGGACGAAAAGTTTCCTCGGAATTTTTGGCGTCAACTCTATGCGCAGAGTCACAAACTGGTGATTCGCCGGATGTTTTACAAGGATTAAATACTGTCCGCTTTTTCTGCTCTGAATGGTTCATATATGCAACCGAGTATCAATGGTTACAACAGCTGAGATTTAGTTTGGTGATTTTAAGACGTTCTTCTGATTGGAAACCGAGATATGTGAATGAGTGA

Protein sequence

MGLSESDTINSTKSNCNENVKTTHATYISTLHSSSEQNLELSRSRVLLSPQFLFNYGNKNQAPGSKLDNDPMDFCGRKVSSEFLASTLCAESQTGDSPDVLQGLNTVRFFCSEWFIYATEYQWLQQLRFSLVILRRSSDWKPRYVNE

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh06G001950.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G001950.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G001950.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G001950.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G001950	CmaCh06G001950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G001950.1:exon:222	CmaCh06G001950.1:exon:222	exon
CmaCh06G001950.1:exon:221	CmaCh06G001950.1:exon:221	exon
CmaCh06G001950.1:exon:220	CmaCh06G001950.1:exon:220	exon
CmaCh06G001950.1:exon:219	CmaCh06G001950.1:exon:219	exon
CmaCh06G001950.1:exon:218	CmaCh06G001950.1:exon:218	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G001950.1:cds	CmaCh06G001950.1:cds_5	CDS
CmaCh06G001950.1:cds	CmaCh06G001950.1:cds_4	CDS
CmaCh06G001950.1:cds	CmaCh06G001950.1:cds_3	CDS
CmaCh06G001950.1:cds	CmaCh06G001950.1:cds_2	CDS
CmaCh06G001950.1:cds	CmaCh06G001950.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G001950.1	CmaCh06G001950.1-protein	polypeptide