CmaCh05G004720.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G004720.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionexportin-7-like isoform X1
LocationCma_Chr05: 2205249 .. 2209297 (+)
Sequence length774
RNA-Seq ExpressionCmaCh05G004720.1
SyntenyCmaCh05G004720.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATCGGGAGTAACGTCAATCAATATATCAGCTGTAAGTTGAAATCAAACGTTTGAAGTTGAGAAGAAGTCCTGTATCCGTACTTGCTGTTCGAATCCTTCAATTCAGAAACCGACGTCAGGATAAGTGTATTTTTCTTGCCTCTGTATCTGTTTCTTAGTTTTTGTAGTTCTGCATTTTTTCTTGATGCACTGAGATTTGTGTTGCTCGCGTACAGCCACTCTGCTGATTTCTGTTAACGAAGTGAGTCTTTTGTTTCTTTAGTGGATGGTTGAATCTGAAATGTGAAGATCTGTGAAGTTGAAATAAACTGAACTGCGTTGCTTAACTGAAAATAATGCTGAGATATCAGTGACTGTTTGCTAATTCGTTCTTTCAGATTCCGAAGTGATGGAGTTAGCTCAGTTAGAGGCATTGTGTGAAAGACTTTACAATTCTCAAGACTCAGTTGAGCGAGCCCATGCCGAAAACACTCTGAAGTGCTTCTCCGTGAATACTGATTACATTTCCCAATGCCAATACATTCTCGACCATGCATTGACCCCTTATGCATTGATGCTTGCGAGTTCAAGTTTGTTGAAACAAGTCACCAATCATAGTCTTGCTCTGCAACTTCGTTTAGATATTCGTATTTTTCGAGTCTCTTCTCAACAATTTATTTTTGTAATCACCTTGCAATTTTTTGCTTTCTAAACGTTGGCCATGAATATTACTTGTAGGAGGCTATCTTATTAACTACTTGGCCACCAGAGGGCCTGAATTGCAGCCTTTTGTCAGTGCATCTTTAATTCAGCTACTATGCCGACTCACAAAATTTGGTTGGTTCGACGATGACCGATTTCGGGACATTGTTAAAGAATCCACGAACTTCCTGAGACAGGTAATGTGATCTTTAATAAAGCCCATGTCATAGCTCATTTTAAAGCGGGCATCTTGTCCACTTCCCTTCTCACCAGAACAAGAAAAAAAAAAAAAAAAGCCGTTACTTTATAATCTAATTGGCTGTTGGCTGTTGTAGTGGGATAATGTCTCATCCGGTTTAGGCTTAATGAAATGTTTCTGATCAATAAGAAAAAAGTCTCTGATATATATTATAATGGTATTTATCCTTGGGTGTTATTTTCCATTATGATTGTTAGTTATTAATTGTTATTGTTAGCTGGTCATTACTGTTAGTGCAAGTCTCATGAAACCACGTGGCATATATTTTCTTTTATTCTACATTCATCATTTAGGTTGAATGAATTTTCTGTTATAACATAATTAGAGTGTAAAAGTATGCCGTGACAATACAACTTGCCCAAAAAATGAGTTAAGAGGGGTTCTGTTTGATTAGCAGCTATTTACCTCTAAAAATTTGAACTAGAGATTGAATAAAGTTGTTAAACAGGAATTCGTCATCATTTCGTGGTTTAATATAGTAAATATATACAAGTCCATTCTATAAGATTGTAAAATCCTAATACTTGCAAAACTATTCTTGTAGTAGCTCATATTCTTTTGAAATTATATTGTTTTAATTATCATTTCTTTGGCTAGTCCTCCACATGACGTCTTTTTGTTCGGGAGACTGGCCCATTAACCTCCTCTTTTCATGCAGGCAACATCAGAACACTATGGCATTGGTTTGAAGATATTGAACCAACTTGTATCTGAGATGAATCAGGTTGGTTTTCTAATCGCCACCCTTCTTTATCTGAAAGTTACCATTCCATTTGGGAAAGGGAGGATTTAAATGCTGATGTATCTTTAGCATGTATTTTTCTTGAAAATGTTAAGTTGTAATCATAATCAATATTTTGTTGATGAGAGTAGTTACTTATGGAGCGTTCACTGTCATTCCCCGTTTGCTACTTCTTTGGTTGTAAAATCATAAGAACTAATTTACCTCGTGCCAGTGTACTATTATAATCTTTTATGGGCTATTTGATTGGAGAAGAACTTGATTTTGTAAGGAAAGACTTGTGCTCAACAATATTCATCCATTTAAGGAGGGATATTTCCTTACTTTCTAAAGATTACTGCTTTTCATGGGCTATTCTAAATGACGATGAAATTTCCACTTTCATACATAAGAAACATCCCTTTGTGCACTGTCACTTCACACAAATACAAGAAATCAAACTGCCATGAAGATAGATGAAAAAAGTAGAAATGGGCAGTACAAAAAAAAAAAAAAAGCCCACTACTACTAGTAATGATGCCCATACAAAGGATCCTAATTAAAAAAAATCACAAAAAAAGAGCTCTAATCAGCTCATGTATGGATTCTGTTCTATTAATATTATTTTTCATTCAATGTCATGTTAGAAATTTTTCTTTATAATTTTACTTGTGCATGGCTTCCGTATGAGCCTGTTTTAGTTTTCCCCTTTTAATGTTTTTTTGGGGCTTGTGTTTTAATAAGGTATAAGAGTATTAATCTGTGATTATATCAGACAAGGCTGGCTTTGCTGATATGTTTGTTTCTTTAGGCAAATGATTATATGGTTGGAAACGAATATTTTGAAGACAAGTACAAAAATTTCCAACTTTTTGCTTTGAGTAATACCTTTAGGTTCCATTTAGGTGTCTAATTCCTTATATTTCTTCATCTGGGTCATTCTATTTCTATTAATTTATTTTTATGACCCAAACTTTGTTTTTTGTATCGTAGTTTTTTAGATAAAAGTTTTCCCCCTCTTCTCAACTTTGTTATTTCATTTTTTCTAAATAAAATAATGGTTTTATTTAAAAATGTTCTTTTGAGTAGGAACTGGCGATTGGCCTAAAGGAATTAGACGTGTTACTGCTTATTGCTAGGACAGACACATTTCTATATCAATCGTTTTCCTACATGGTTTTGAGTTCACTCTAGATCATATTTGTGAGGATTAGAAACTAAACTTTTACTTGTTGATTGTAGGTGAAGACAGTTTCAGAAGATTTTAGACAATGGTTATGTTCAAATACTTGTTGGAGGAAAGCATGTTTATTGGCTTTTTGGGGGCTTTTGTGTATTTAGTTTTTAAATTTTAAATTTTCTAGTGGTGTAATGTGCACACGAAGTTCTCTCCCCCCTTGGTCTTCATAAAGGATCACCCATCCTCCATATATTTTAGGTTGTAATGATTGACATTCAATTAATAAAAATTCTCATTTTGTATGAAATAGCAAGTTTGCATTCAGAATCAGTATACCTATTTTTCTGCTGATTTTTATGTAGTTTTATATCGGTTGCCTGCAAGAATGTAGATTTATTTCTTTTTCTATTTTTCCGGCACCTCTAAATTGAATTTCATATCGTATATTATTATTTACTTCGTTGTAATTTTTTGACATCAGCAACTTGTTCTTTTATTAACTGTTGAATTTTTAGCCTAATCAAGGATTCCCTTCAACGAATCATCGGAGAGTGGCTTGCTCCTTCAGGGACCAAGGGTTGTTCCAAATCTTCCAAATATCTTTAACATCCTTATGTCAGTTGAAGAATGATGGTAACGTGCTAATCTTACTTAGTTGTCAACATGACTAAACCAGTATTTTTGAATTCTTTGAACCTTCCTATCTTAAAAATTTTGCTCGTTAACTGATAGATTTTTATTTGTGTGGCATACAGTAGCTGGTCGTTTGCAAGAATTAGCACTTTCTCTATCACTAAAGTGTTTATCTTTTGATTTTGTTGGGACCTCCATTGACGAAAGCTCAGAAGAGTTTGGCACTGTTCAGGTATTTCATTTAGTTATCTACCAGTTTTCATTTAATTTTGCTGTTGAAGATTGGAATAGTCTTGGCAAGCATAGCACCTACAACAAATTTATGTAAAAGAAGCCTGAGCCTACCTTTATTCATTTGTGGTGTGCTCTTTTATGAGAGATGTAAAGTTTTAACACTTATTTTTCACCTATAAGTATTCTAGTTACATTTGGTGAGTTGCTTCAGAGTTTTGGCCTCTGGTGGTGCATACCTAGCAATTTCCTATATATTATTGCTCAGGTTTATAAGGGCAACGCTTTTGTTCGCAAAGTTCAGGCCTTTTGACTTTGCTGTTATGGCTGCTTATTGA

mRNA sequence

ATGGATATCGGGAATTCCGAAGTGATGGAGTTAGCTCAGTTAGAGGCATTGTGTGAAAGACTTTACAATTCTCAAGACTCAGTTGAGCGAGCCCATGCCGAAAACACTCTGAAGTGCTTCTCCGTGAATACTGATTACATTTCCCAATGCCAATACATTCTCGACCATGCATTGACCCCTTATGCATTGATGCTTGCGAGTTCAAGAGGCTATCTTATTAACTACTTGGCCACCAGAGGGCCTGAATTGCAGCCTTTTGTCAGTGCATCTTTAATTCAGCTACTATGCCGACTCACAAAATTTGGTTGGTTCGACGATGACCGATTTCGGGACATTGTTAAAGAATCCACGAACTTCCTGAGACAGGCAACATCAGAACACTATGGCATTGGTTTGAAGATATTGAACCAACTTGTATCTGAGATGAATCAGGAACTGGCGATTGGCCTAAAGGAATTAGACGTCCTAATCAAGGATTCCCTTCAACGAATCATCGGAGAGTGGCTTGCTCCTTCAGGGACCAAGGTAGCTGGTCGTTTGCAAGAATTAGCACTTTCTCTATCACTAAAGTGTTTATCTTTTGATTTTGTTGGGACCTCCATTGACGAAAGCTCAGAAGAGTTTGGCACTGTTCAGTTTTCATTTAATTTTGCTGTTGAAGATTGGAATAGTCTTGGCAAGCATAGCACCTACAACAAATTTATGTTTATAAGGGCAACGCTTTTGTTCGCAAAGTTCAGGCCTTTTGACTTTGCTGTTATGGCTGCTTATTGA

Coding sequence (CDS)

ATGGATATCGGGAATTCCGAAGTGATGGAGTTAGCTCAGTTAGAGGCATTGTGTGAAAGACTTTACAATTCTCAAGACTCAGTTGAGCGAGCCCATGCCGAAAACACTCTGAAGTGCTTCTCCGTGAATACTGATTACATTTCCCAATGCCAATACATTCTCGACCATGCATTGACCCCTTATGCATTGATGCTTGCGAGTTCAAGAGGCTATCTTATTAACTACTTGGCCACCAGAGGGCCTGAATTGCAGCCTTTTGTCAGTGCATCTTTAATTCAGCTACTATGCCGACTCACAAAATTTGGTTGGTTCGACGATGACCGATTTCGGGACATTGTTAAAGAATCCACGAACTTCCTGAGACAGGCAACATCAGAACACTATGGCATTGGTTTGAAGATATTGAACCAACTTGTATCTGAGATGAATCAGGAACTGGCGATTGGCCTAAAGGAATTAGACGTCCTAATCAAGGATTCCCTTCAACGAATCATCGGAGAGTGGCTTGCTCCTTCAGGGACCAAGGTAGCTGGTCGTTTGCAAGAATTAGCACTTTCTCTATCACTAAAGTGTTTATCTTTTGATTTTGTTGGGACCTCCATTGACGAAAGCTCAGAAGAGTTTGGCACTGTTCAGTTTTCATTTAATTTTGCTGTTGAAGATTGGAATAGTCTTGGCAAGCATAGCACCTACAACAAATTTATGTTTATAAGGGCAACGCTTTTGTTCGCAAAGTTCAGGCCTTTTGACTTTGCTGTTATGGCTGCTTATTGA

Protein sequence

MDIGNSEVMELAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLASSRGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWFDDDRFRDIVKESTNFLRQATSEHYGIGLKILNQLVSEMNQELAIGLKELDVLIKDSLQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQFSFNFAVEDWNSLGKHSTYNKFMFIRATLLFAKFRPFDFAVMAAY
Homology
[Close]
BLAST of CmaCh05G004720.1 vs. ExPASy Swiss-Prot
Match: Q5ZLT0 (Exportin-7 OS=Gallus gallus OX=9031 GN=XPO7 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-29
Identity = 89/246 (36.18%), Postives = 136/246 (55.28%), Query Frame = 0 

Query: 8   VMELAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLAS 67
           V  LAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+   + Y+ +LA+
Sbjct: 5   VQSLAQLENLCKQLYETTDTATRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64

Query: 68  S---------------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWFDD 127
           +                     R Y++NYLATR P+L  FV+ +LIQL  R+TK GWFD 
Sbjct: 65  TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-PKLATFVTQALIQLYARITKLGWFDC 124

Query: 128 DR----FRDIVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLK 187
            +    FR+++ + T FL Q + EH  IG+ IL+QL +E+NQ           ++A   +
Sbjct: 125 QKDEYVFRNVITDVTRFL-QDSVEHCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 184

Query: 188 -----ELDVLIKDSLQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSE 213
                ++  L  + L++  G+ L  +     G L +L L L+  CL+FDF+GTS DESS+
Sbjct: 185 DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQL-LKLTHNCLNFDFIGTSTDESSD 244

[Close]
BLAST of CmaCh05G004720.1 vs. ExPASy Swiss-Prot
Match: Q704U0 (Exportin-7-A OS=Xenopus laevis OX=8355 GN=xpo7-a PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 88/246 (35.77%), Postives = 132/246 (53.66%), Query Frame = 0 

Query: 8   VMELAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLAS 67
           V  LAQLE LC++LY + D+  R  AE  L  F+ +++ +S+CQ +L+   + Y+ +LA+
Sbjct: 5   VQSLAQLEILCKQLYETTDTSTRLQAEKALVEFTNSSECLSKCQLLLERGSSSYSQLLAA 64

Query: 68  S---------------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWFDD 127
           +                     R Y++ YLATR P+L  FV+ +LIQL  R+TK GWFD 
Sbjct: 65  TCLTKLVSRSTNPLPLEQRIDIRNYVLTYLATR-PKLASFVTQALIQLYARITKLGWFDS 124

Query: 128 DR----FRDIVKESTNFLRQATSEHYGIGLKILNQLVSEMNQELAI-------------- 187
            +    FR ++ + T FL Q + E+  IG+ IL+QL +E+NQ  A               
Sbjct: 125 QKDEYVFRSVIGDVTRFL-QDSVEYCVIGVSILSQLTNEINQADATHPLTKHRKIASSFR 184

Query: 188 --GLKELDVLIKDSLQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSE 213
              L E+  L  + L++  G+ L  S       L +L L L+  CL+FDF+GTS DESS+
Sbjct: 185 DSALFEIFTLSCNLLKQASGKSLLLSDGSQHDLLMQL-LKLTHNCLNFDFIGTSTDESSD 244

[Close]
BLAST of CmaCh05G004720.1 vs. ExPASy Swiss-Prot
Match: Q9UIA9 (Exportin-7 OS=Homo sapiens OX=9606 GN=XPO7 PE=1 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 89/246 (36.18%), Postives = 135/246 (54.88%), Query Frame = 0 

Query: 8   VMELAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLAS 67
           V  LAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+   + Y+ +LA+
Sbjct: 5   VQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64

Query: 68  S---------------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWF-- 127
           +                     R Y++NYLATR P+L  FV+ +LIQL  R+TK GWF  
Sbjct: 65  TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-PKLATFVTQALIQLYARITKLGWFDC 124

Query: 128 --DDDRFRDIVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLK 187
             DD  FR+ + + T FL Q + E+  IG+ IL+QL +E+NQ           ++A   +
Sbjct: 125 QKDDYVFRNAITDVTRFL-QDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 184

Query: 188 -----ELDVLIKDSLQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSE 213
                ++  L  + L++  G+ L  +     G L +L L L+  CL+FDF+GTS DESS+
Sbjct: 185 DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQL-LKLTHNCLNFDFIGTSTDESSD 244

[Close]
BLAST of CmaCh05G004720.1 vs. ExPASy Swiss-Prot
Match: Q9EPK7 (Exportin-7 OS=Mus musculus OX=10090 GN=Xpo7 PE=1 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 89/246 (36.18%), Postives = 135/246 (54.88%), Query Frame = 0 

Query: 8   VMELAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLAS 67
           V  LAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+   + Y+ +LA+
Sbjct: 5   VQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64

Query: 68  S---------------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWF-- 127
           +                     R Y++NYLATR P+L  FV+ +LIQL  R+TK GWF  
Sbjct: 65  TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-PKLATFVTQALIQLYARITKLGWFDC 124

Query: 128 --DDDRFRDIVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLK 187
             DD  FR+ + + T FL Q + E+  IG+ IL+QL +E+NQ           ++A   +
Sbjct: 125 QKDDYVFRNAITDVTRFL-QDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 184

Query: 188 -----ELDVLIKDSLQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSE 213
                ++  L  + L++  G+ L  +     G L +L L L+  CL+FDF+GTS DESS+
Sbjct: 185 DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQL-LKLTHNCLNFDFIGTSTDESSD 244

[Close]
BLAST of CmaCh05G004720.1 vs. ExPASy Swiss-Prot
Match: Q5R9G4 (Exportin-7 OS=Pongo abelii OX=9601 GN=XPO7 PE=2 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 89/246 (36.18%), Postives = 135/246 (54.88%), Query Frame = 0 

Query: 8   VMELAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLAS 67
           V  LAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+   + Y+ +LA+
Sbjct: 5   VQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64

Query: 68  S---------------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWF-- 127
           +                     R Y++NYLATR P+L  FV+ +LIQL  R+TK GWF  
Sbjct: 65  TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-PKLATFVTQALIQLYARITKLGWFDC 124

Query: 128 --DDDRFRDIVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLK 187
             DD  FR+ + + T FL Q + E+  IG+ IL+QL +E+NQ           ++A   +
Sbjct: 125 QKDDYVFRNAITDVTRFL-QDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 184

Query: 188 -----ELDVLIKDSLQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSE 213
                ++  L  + L++  G+ L  +     G L +L L L+  CL+FDF+GTS DESS+
Sbjct: 185 DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQL-LKLTHNCLNFDFIGTSTDESSD 244

[Close]
BLAST of CmaCh05G004720.1 vs. TAIR 10
Match: AT5G06120.1 (ARM repeat superfamily protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-72
Identity = 148/247 (59.92%), Postives = 177/247 (71.66%), Query Frame = 0 

Query: 11  LAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLASS-- 70
           LAQLEA+CERLYNSQDS ERAHAEN+L+CFSVNTDYISQCQYILD++  PY+LMLASS  
Sbjct: 12  LAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLASSSL 71

Query: 71  -----------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWFDDDRFRD 130
                            R Y++NYLATRGP++Q FV ASLIQLLCRLTKFGW DDDRFRD
Sbjct: 72  LKQVTDHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDRFRD 131

Query: 131 IVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLKELDVLIKDS 190
           +VKESTNFL Q +S+HY IGL+IL+QLV EMNQ            +A   ++  +     
Sbjct: 132 VVKESTNFLEQGSSDHYAIGLRILDQLVQEMNQPNPGLPSTHHRRVACNFRDQSLF---Q 191

Query: 191 LQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQF--SFNFA 226
           + RI    L+      AGRLQELALSL+L+C+SFDFVGTSIDES+EEFGTVQ   S+   
Sbjct: 192 VFRIALTSLSYLKNDAAGRLQELALSLALRCVSFDFVGTSIDESTEEFGTVQIPTSWRSV 251

[Close]
BLAST of CmaCh05G004720.1 vs. TAIR 10
Match: AT5G06120.4 (ARM repeat superfamily protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-72
Identity = 148/247 (59.92%), Postives = 177/247 (71.66%), Query Frame = 0 

Query: 11  LAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLASS-- 70
           LAQLEA+CERLYNSQDS ERAHAEN+L+CFSVNTDYISQCQYILD++  PY+LMLASS  
Sbjct: 12  LAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLASSSL 71

Query: 71  -----------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWFDDDRFRD 130
                            R Y++NYLATRGP++Q FV ASLIQLLCRLTKFGW DDDRFRD
Sbjct: 72  LKQVTDHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDRFRD 131

Query: 131 IVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLKELDVLIKDS 190
           +VKESTNFL Q +S+HY IGL+IL+QLV EMNQ            +A   ++  +     
Sbjct: 132 VVKESTNFLEQGSSDHYAIGLRILDQLVQEMNQPNPGLPSTHHRRVACNFRDQSLF---Q 191

Query: 191 LQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQF--SFNFA 226
           + RI    L+      AGRLQELALSL+L+C+SFDFVGTSIDES+EEFGTVQ   S+   
Sbjct: 192 VFRIALTSLSYLKNDAAGRLQELALSLALRCVSFDFVGTSIDESTEEFGTVQIPTSWRSV 251

[Close]
BLAST of CmaCh05G004720.1 vs. TAIR 10
Match: AT5G06120.3 (ARM repeat superfamily protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-72
Identity = 148/247 (59.92%), Postives = 177/247 (71.66%), Query Frame = 0 

Query: 11  LAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLASS-- 70
           LAQLEA+CERLYNSQDS ERAHAEN+L+CFSVNTDYISQCQYILD++  PY+LMLASS  
Sbjct: 4   LAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLASSSL 63

Query: 71  -----------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWFDDDRFRD 130
                            R Y++NYLATRGP++Q FV ASLIQLLCRLTKFGW DDDRFRD
Sbjct: 64  LKQVTDHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDRFRD 123

Query: 131 IVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLKELDVLIKDS 190
           +VKESTNFL Q +S+HY IGL+IL+QLV EMNQ            +A   ++  +     
Sbjct: 124 VVKESTNFLEQGSSDHYAIGLRILDQLVQEMNQPNPGLPSTHHRRVACNFRDQSLF---Q 183

Query: 191 LQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQF--SFNFA 226
           + RI    L+      AGRLQELALSL+L+C+SFDFVGTSIDES+EEFGTVQ   S+   
Sbjct: 184 VFRIALTSLSYLKNDAAGRLQELALSLALRCVSFDFVGTSIDESTEEFGTVQIPTSWRSV 243

[Close]
BLAST of CmaCh05G004720.1 vs. TAIR 10
Match: AT5G06120.2 (ARM repeat superfamily protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-72
Identity = 148/247 (59.92%), Postives = 177/247 (71.66%), Query Frame = 0 

Query: 11  LAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQYILDHALTPYALMLASS-- 70
           LAQLEA+CERLYNSQDS ERAHAEN+L+CFSVNTDYISQCQYILD++  PY+LMLASS  
Sbjct: 4   LAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLASSSL 63

Query: 71  -----------------RGYLINYLATRGPELQPFVSASLIQLLCRLTKFGWFDDDRFRD 130
                            R Y++NYLATRGP++Q FV ASLIQLLCRLTKFGW DDDRFRD
Sbjct: 64  LKQVTDHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDRFRD 123

Query: 131 IVKESTNFLRQATSEHYGIGLKILNQLVSEMNQ-----------ELAIGLKELDVLIKDS 190
           +VKESTNFL Q +S+HY IGL+IL+QLV EMNQ            +A   ++  +     
Sbjct: 124 VVKESTNFLEQGSSDHYAIGLRILDQLVQEMNQPNPGLPSTHHRRVACNFRDQSLF---Q 183

Query: 191 LQRIIGEWLAPSGTKVAGRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQF--SFNFA 226
           + RI    L+      AGRLQELALSL+L+C+SFDFVGTSIDES+EEFGTVQ   S+   
Sbjct: 184 VFRIALTSLSYLKNDAAGRLQELALSLALRCVSFDFVGTSIDESTEEFGTVQIPTSWRSV 243

The following BLAST results are available for this feature:
BLAST of CmaCh05G004720.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5ZLT07.6e-2936.18Exportin-7 OS=Gallus gallus OX=9031 GN=XPO7 PE=2 SV=1[more]
Q704U08.3e-2835.77Exportin-7-A OS=Xenopus laevis OX=8355 GN=xpo7-a PE=1 SV=1[more]
Q9UIA98.3e-2836.18Exportin-7 OS=Homo sapiens OX=9606 GN=XPO7 PE=1 SV=3[more]
Q9EPK78.3e-2836.18Exportin-7 OS=Mus musculus OX=10090 GN=Xpo7 PE=1 SV=3[more]
Q5R9G48.3e-2836.18Exportin-7 OS=Pongo abelii OX=9601 GN=XPO7 PE=2 SV=3[more]
BLAST of CmaCh05G004720.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G06120.11.9e-7259.92ARM repeat superfamily protein [more]
AT5G06120.41.9e-7259.92ARM repeat superfamily protein [more]
AT5G06120.31.9e-7259.92ARM repeat superfamily protein [more]
AT5G06120.21.9e-7259.92ARM repeat superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availablePANTHERPTHR12596:SF18BNAA10G30440D PROTEINcoord: 10..221
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..221
e-value: 8.3E-13
score: 49.7
IPR044189Exportin 4/7-likePANTHERPTHR12596EXPORTIN 4,7-RELATEDcoord: 10..221
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 9..207

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh05G004720CmaCh05G004720gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh05G004720.1:exon:2363CmaCh05G004720.1:exon:2363exon
CmaCh05G004720.1:exon:2362CmaCh05G004720.1:exon:2362exon
CmaCh05G004720.1:exon:2361CmaCh05G004720.1:exon:2361exon
CmaCh05G004720.1:exon:2360CmaCh05G004720.1:exon:2360exon
CmaCh05G004720.1:exon:2359CmaCh05G004720.1:exon:2359exon
CmaCh05G004720.1:exon:2358CmaCh05G004720.1:exon:2358exon
CmaCh05G004720.1:exon:2357CmaCh05G004720.1:exon:2357exon
CmaCh05G004720.1:exon:2356CmaCh05G004720.1:exon:2356exon
CmaCh05G004720.1:exon:2355CmaCh05G004720.1:exon:2355exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh05G004720.1:cdsCmaCh05G004720.1:cdsCDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_2CDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_3CDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_4CDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_5CDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_6CDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_7CDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_8CDS
CmaCh05G004720.1:cdsCmaCh05G004720.1:cds_9CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh05G004720.1CmaCh05G004720.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051169 nuclear transport
molecular_function GO:0005049 nuclear export signal receptor activity